RNA–Protein interactions for RNA: ENST00000489451.1

ACTN4-206, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-206ENST00000489451 COL12A1Q99715 3063 aa11.84□□□□□ -0.51
ACTN4-206ENST00000489451 DOPEY2Q9Y3R5 2298 aa11.83□□□□□ -0.52
ACTN4-206ENST00000489451 TMEM202A6NGA9 273 aa11.83□□□□□ -0.52
ACTN4-206ENST00000489451 SMTNL1A8MU46 457 aa11.83□□□□□ -0.52
ACTN4-206ENST00000489451 K7ENP7 123 aa11.83□□□□□ -0.52
ACTN4-206ENST00000489451 TRAFD1O14545 582 aaPredicted RBP11.83□□□□□ -0.52
ACTN4-206ENST00000489451 FGF10O15520 208 aaPredicted RBP11.83□□□□□ -0.52
ACTN4-206ENST00000489451 PCCBP05166 539 aa11.83□□□□□ -0.52
ACTN4-206ENST00000489451 NDST2P52849 883 aa11.83□□□□□ -0.52
ACTN4-206ENST00000489451 AIF1P55008 147 aa11.83□□□□□ -0.52
ACTN4-206ENST00000489451 TPI1P60174 286 aa11.83□□□□□ -0.52
ACTN4-206ENST00000489451 SRP54P61011 504 aaKnown RBP11.83□□□□□ -0.52
ACTN4-206ENST00000489451 CCL7P80098 99 aa11.83□□□□□ -0.52
ACTN4-206ENST00000489451 RAD51Q06609 339 aa11.83□□□□□ -0.52
ACTN4-206ENST00000489451 VAC14Q08AM6 782 aa11.83□□□□□ -0.52
ACTN4-206ENST00000489451 ELP6Q0PNE2 266 aa11.83□□□□□ -0.52
ACTN4-206ENST00000489451 MAMLD1Q13495 774 aa11.83□□□□□ -0.52
ACTN4-206ENST00000489451 LY6DQ14210 128 aa11.83□□□□□ -0.52
ACTN4-206ENST00000489451 PLEKHA7Q6IQ23 1121 aa11.83□□□□□ -0.52
ACTN4-206ENST00000489451 INO80CQ6PI98 192 aaPredicted RBP11.83□□□□□ -0.52
ACTN4-206ENST00000489451 ENPP7Q6UWV6 458 aa11.83□□□□□ -0.52
ACTN4-206ENST00000489451 TMPRSS9Q7Z410 1059 aa11.83□□□□□ -0.52
ACTN4-206ENST00000489451 SDR16C5Q8N3Y7 309 aa11.83□□□□□ -0.52
ACTN4-206ENST00000489451 GPR156Q8NFN8 814 aa11.83□□□□□ -0.52
ACTN4-206ENST00000489451 CCL4L1Q8NHW4 92 aa11.83□□□□□ -0.52
ACTN4-206ENST00000489451 TPCN2Q8NHX9 752 aa11.83□□□□□ -0.52
ACTN4-206ENST00000489451 GRAMD1AQ96CP6 724 aa11.83□□□□□ -0.52
ACTN4-206ENST00000489451 LIN37Q96GY3 246 aaPredicted RBP11.83□□□□□ -0.52
ACTN4-206ENST00000489451 RBM15Q96T37 977 aaKnown RBP eCLIP11.83□□□□□ -0.52
ACTN4-206ENST00000489451 NCAPGQ9BPX3 1015 aa11.83□□□□□ -0.52
ACTN4-206ENST00000489451 C1QTNF7Q9BXJ2 289 aa11.83□□□□□ -0.52
ACTN4-206ENST00000489451 DPH1Q9BZG8 443 aa11.83□□□□□ -0.52
ACTN4-206ENST00000489451 FOXP3Q9BZS1 431 aa11.83□□□□□ -0.52
ACTN4-206ENST00000489451 FGF22Q9HCT0 170 aa11.83□□□□□ -0.52
ACTN4-206ENST00000489451 MRPL40Q9NQ50 206 aaKnown RBP11.83□□□□□ -0.52
ACTN4-206ENST00000489451 SEPT11Q9NVA2 429 aaKnown RBP11.83□□□□□ -0.52
ACTN4-206ENST00000489451 TMEM63CQ9P1W3 806 aa11.83□□□□□ -0.52
ACTN4-206ENST00000489451 SRPK3Q9UPE1 567 aa11.83□□□□□ -0.52
ACTN4-206ENST00000489451 AP4E1Q9UPM8 1137 aa11.83□□□□□ -0.52
ACTN4-206ENST00000489451 ATP8A1Q9Y2Q0 1164 aa11.83□□□□□ -0.52
ACTN4-206ENST00000489451 UNC13CQ8NB66 2214 aa11.82□□□□□ -0.52
ACTN4-206ENST00000489451 CCDC187A0A096LP49 1063 aa11.82□□□□□ -0.52
ACTN4-206ENST00000489451 TTC24A2A3L6 582 aaPredicted RBP11.82□□□□□ -0.52
ACTN4-206ENST00000489451 D6RAR5 112 aa11.82□□□□□ -0.52
ACTN4-206ENST00000489451 TEX33O43247 280 aa11.82□□□□□ -0.52
ACTN4-206ENST00000489451 NOBOXO60393 691 aa11.82□□□□□ -0.52
ACTN4-206ENST00000489451 RECQL5O94762 991 aaPredicted RBP11.82□□□□□ -0.52
ACTN4-206ENST00000489451 TNFSF15O95150 251 aa11.82□□□□□ -0.52
ACTN4-206ENST00000489451 RASGRP1O95267 797 aa11.82□□□□□ -0.52
ACTN4-206ENST00000489451 PEX11BO96011 259 aa11.82□□□□□ -0.52
ACTN4-206ENST00000489451 KRT10P13645 584 aa11.82□□□□□ -0.52
ACTN4-206ENST00000489451 HGFP14210 728 aa11.82□□□□□ -0.52
ACTN4-206ENST00000489451 RPIAP49247 311 aa11.82□□□□□ -0.52
ACTN4-206ENST00000489451 SUOXP51687 545 aa11.82□□□□□ -0.52
ACTN4-206ENST00000489451 UCNP55089 124 aa11.82□□□□□ -0.52
ACTN4-206ENST00000489451 RHDQ02161 417 aa11.82□□□□□ -0.52
ACTN4-206ENST00000489451 UBXN1Q04323 297 aa11.82□□□□□ -0.52
ACTN4-206ENST00000489451 MTM1Q13496 603 aa11.82□□□□□ -0.52
ACTN4-206ENST00000489451 SPIDRQ14159 915 aa11.82□□□□□ -0.52
ACTN4-206ENST00000489451 BROXQ5VW32 411 aa11.82□□□□□ -0.52
ACTN4-206ENST00000489451 KIAA1614Q5VZ46 1190 aa11.82□□□□□ -0.52
ACTN4-206ENST00000489451 FOXR1Q6PIV2 292 aa11.82□□□□□ -0.52
ACTN4-206ENST00000489451 LVRNQ6Q4G3 990 aa11.82□□□□□ -0.52
ACTN4-206ENST00000489451 LIPIQ6XZB0 460 aa11.82□□□□□ -0.52
ACTN4-206ENST00000489451 RD3Q7Z3Z2 195 aa11.82□□□□□ -0.52
ACTN4-206ENST00000489451 SRLQ86TD4 932 aa11.82□□□□□ -0.52
ACTN4-206ENST00000489451 FSTL5Q8N475 847 aaPredicted RBP11.82□□□□□ -0.52
ACTN4-206ENST00000489451 WDR36Q8NI36 951 aaKnown RBP11.82□□□□□ -0.52
ACTN4-206ENST00000489451 WBP1Q96G27 269 aa11.82□□□□□ -0.52
ACTN4-206ENST00000489451 ZNF641Q96N77 438 aaPredicted RBP11.82□□□□□ -0.52
ACTN4-206ENST00000489451 TUBGCP5Q96RT8 1024 aa11.82□□□□□ -0.52
ACTN4-206ENST00000489451 LGR4Q9BXB1 951 aa11.82□□□□□ -0.52
ACTN4-206ENST00000489451 TRIM4Q9C037 500 aa11.82□□□□□ -0.52
ACTN4-206ENST00000489451 SYNDIG1Q9H7V2 258 aa11.82□□□□□ -0.52
ACTN4-206ENST00000489451 GULP1Q9UBP9 304 aa11.82□□□□□ -0.52
ACTN4-206ENST00000489451 KLQ9UEF7 1012 aa11.82□□□□□ -0.52
ACTN4-206ENST00000489451 IL17BQ9UHF5 180 aa11.82□□□□□ -0.52
ACTN4-206ENST00000489451 DGKBQ9Y6T7 804 aa11.82□□□□□ -0.52
ACTN4-206ENST00000489451 ANKRD17O75179 2603 aaKnown RBP11.82□□□□□ -0.52
ACTN4-206ENST00000489451 FUCA1P04066 466 aa11.81□□□□□ -0.52
ACTN4-206ENST00000489451 ITGA2BP08514 1039 aa11.81□□□□□ -0.52
ACTN4-206ENST00000489451 GP1BBP13224 206 aa11.81□□□□□ -0.52
ACTN4-206ENST00000489451 TCF4P15884 667 aa11.81□□□□□ -0.52
ACTN4-206ENST00000489451 ERCC2P18074 760 aa11.81□□□□□ -0.52
ACTN4-206ENST00000489451 PSMA2P25787 234 aa11.81□□□□□ -0.52
ACTN4-206ENST00000489451 RBMS1P29558 406 aaKnown RBP11.81□□□□□ -0.52
ACTN4-206ENST00000489451 HTR7P34969 479 aa11.81□□□□□ -0.52
ACTN4-206ENST00000489451 CSNK1DP48730 415 aa11.81□□□□□ -0.52
ACTN4-206ENST00000489451 BLKP51451 505 aa11.81□□□□□ -0.52
ACTN4-206ENST00000489451 DPYSQ14117 519 aa11.81□□□□□ -0.52
ACTN4-206ENST00000489451 PTPRRQ15256 657 aa11.81□□□□□ -0.52
ACTN4-206ENST00000489451 ELOCQ15369 112 aa11.81□□□□□ -0.52
ACTN4-206ENST00000489451 ANO6Q4KMQ2 910 aa11.81□□□□□ -0.52
ACTN4-206ENST00000489451 ESRP1Q6NXG1 681 aaKnown RBP11.81□□□□□ -0.52
ACTN4-206ENST00000489451 BRAT1Q6PJG6 821 aa11.81□□□□□ -0.52
ACTN4-206ENST00000489451 OGFOD3Q6PK18 319 aa11.81□□□□□ -0.52
ACTN4-206ENST00000489451 RFX8Q6ZV50 586 aa11.81□□□□□ -0.52
ACTN4-206ENST00000489451 AOPEPQ8N6M6 819 aa11.81□□□□□ -0.52
ACTN4-206ENST00000489451 WDR48Q8TAF3 677 aa11.81□□□□□ -0.52
ACTN4-206ENST00000489451 PTCD2Q8WV60 388 aaKnown RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms