RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 PSMB7Q99436 277 aa11.59□□□□□ -0.55
HDAC6-233ENST00000489352 SLC38A3Q99624 504 aa11.59□□□□□ -0.55
HDAC6-233ENST00000489352 SPON2Q9BUD6 331 aa11.59□□□□□ -0.55
HDAC6-233ENST00000489352 GSDMCQ9BYG8 508 aa11.59□□□□□ -0.55
HDAC6-233ENST00000489352 TNMDQ9H2S6 317 aa11.59□□□□□ -0.55
HDAC6-233ENST00000489352 ACTL8Q9H568 366 aa11.59□□□□□ -0.55
HDAC6-233ENST00000489352 SUDS3Q9H7L9 328 aaPredicted RBP11.59□□□□□ -0.55
HDAC6-233ENST00000489352 COX16Q9P0S2 106 aa11.59□□□□□ -0.55
HDAC6-233ENST00000489352 TMEM63CQ9P1W3 806 aa11.59□□□□□ -0.55
HDAC6-233ENST00000489352 B3GNT3Q9Y2A9 372 aa11.59□□□□□ -0.55
HDAC6-233ENST00000489352 COQ6Q9Y2Z9 468 aa11.59□□□□□ -0.55
HDAC6-233ENST00000489352 C21orf140B9A014 251 aa11.58□□□□□ -0.56
HDAC6-233ENST00000489352 F5H423 210 aaPredicted RBP11.58□□□□□ -0.56
HDAC6-233ENST00000489352 TRUB2O95900 331 aaKnown RBP11.58□□□□□ -0.56
HDAC6-233ENST00000489352 MT-ND3P03897 115 aa11.58□□□□□ -0.56
HDAC6-233ENST00000489352 UGT2B4P06133 528 aa11.58□□□□□ -0.56
HDAC6-233ENST00000489352 FYNP06241 537 aa11.58□□□□□ -0.56
HDAC6-233ENST00000489352 VDRP11473 427 aa11.58□□□□□ -0.56
HDAC6-233ENST00000489352 CCNB1P14635 433 aa11.58□□□□□ -0.56
HDAC6-233ENST00000489352 HTR1EP28566 365 aa11.58□□□□□ -0.56
HDAC6-233ENST00000489352 GARSP41250 739 aaKnown RBP11.58□□□□□ -0.56
HDAC6-233ENST00000489352 ART1P52961 327 aa11.58□□□□□ -0.56
HDAC6-233ENST00000489352 MTA1Q13330 715 aa11.58□□□□□ -0.56
HDAC6-233ENST00000489352 UGT8Q16880 541 aa11.58□□□□□ -0.56
HDAC6-233ENST00000489352 SYPL2Q5VXT5 272 aa11.58□□□□□ -0.56
HDAC6-233ENST00000489352 ARHGAP22Q7Z5H3 698 aa11.58□□□□□ -0.56
HDAC6-233ENST00000489352 PARP9Q8IXQ6 854 aa11.58□□□□□ -0.56
HDAC6-233ENST00000489352 OR6K2Q8NGY2 324 aa11.58□□□□□ -0.56
HDAC6-233ENST00000489352 NCSTNQ92542 709 aa11.58□□□□□ -0.56
HDAC6-233ENST00000489352 OSBPL1AQ9BXW6 950 aa11.58□□□□□ -0.56
HDAC6-233ENST00000489352 TRIM8Q9BZR9 551 aa11.58□□□□□ -0.56
HDAC6-233ENST00000489352 TM6SF2Q9BZW4 377 aa11.58□□□□□ -0.56
HDAC6-233ENST00000489352 FAM204AQ9H8W3 233 aa11.58□□□□□ -0.56
HDAC6-233ENST00000489352 SLC39A2Q9NP94 309 aa11.58□□□□□ -0.56
HDAC6-233ENST00000489352 GPR83Q9NYM4 423 aa11.58□□□□□ -0.56
HDAC6-233ENST00000489352 TAAR2Q9P1P5 351 aa11.58□□□□□ -0.56
HDAC6-233ENST00000489352 KLHL3Q9UH77 587 aa11.58□□□□□ -0.56
HDAC6-233ENST00000489352 LNPEPQ9UIQ6 1025 aa11.58□□□□□ -0.56
HDAC6-233ENST00000489352 KIAA1257Q9ULG3 409 aa11.58□□□□□ -0.56
HDAC6-233ENST00000489352 NBEAL1Q6ZS30 2694 aa11.58□□□□□ -0.56
HDAC6-233ENST00000489352 TMEM202A6NGA9 273 aa11.57□□□□□ -0.56
HDAC6-233ENST00000489352 TMEM200CA6NKL6 621 aa11.57□□□□□ -0.56
HDAC6-233ENST00000489352 TNFRSF10CO14798 259 aa11.57□□□□□ -0.56
HDAC6-233ENST00000489352 AREL1O15033 823 aa11.57□□□□□ -0.56
HDAC6-233ENST00000489352 ZNF185O15231 689 aa11.57□□□□□ -0.56
HDAC6-233ENST00000489352 PPM1DO15297 605 aa11.57□□□□□ -0.56
HDAC6-233ENST00000489352 KIAA0754O94854 1291 aa11.57□□□□□ -0.56
HDAC6-233ENST00000489352 C8BP07358 591 aa11.57□□□□□ -0.56
HDAC6-233ENST00000489352 KRT13P13646 458 aa11.57□□□□□ -0.56
HDAC6-233ENST00000489352 GKP32189 559 aa11.57□□□□□ -0.56
HDAC6-233ENST00000489352 SERPINH1P50454 418 aaKnown RBP11.57□□□□□ -0.56
HDAC6-233ENST00000489352 YWHAEP62258 255 aaKnown RBP11.57□□□□□ -0.56
HDAC6-233ENST00000489352 RPS15P62841 145 aaKnown RBP11.57□□□□□ -0.56
HDAC6-233ENST00000489352 MTM1Q13496 603 aa11.57□□□□□ -0.56
HDAC6-233ENST00000489352 POLD3Q15054 466 aaPredicted RBP11.57□□□□□ -0.56
HDAC6-233ENST00000489352 LYPLAL1Q5VWZ2 237 aa11.57□□□□□ -0.56
HDAC6-233ENST00000489352 WDR74Q6RFH5 385 aaPredicted RBP11.57□□□□□ -0.56
HDAC6-233ENST00000489352 SETD3Q86TU7 594 aaPredicted RBP11.57□□□□□ -0.56
HDAC6-233ENST00000489352 C17orf82Q86X59 251 aaPredicted RBP11.57□□□□□ -0.56
HDAC6-233ENST00000489352 FAM186BQ8IYM0 893 aa11.57□□□□□ -0.56
HDAC6-233ENST00000489352 FDCSPQ8NFU4 85 aa11.57□□□□□ -0.56
HDAC6-233ENST00000489352 SLC35F5Q8WV83 523 aa11.57□□□□□ -0.56
HDAC6-233ENST00000489352 CHTF18Q8WVB6 975 aa11.57□□□□□ -0.56
HDAC6-233ENST00000489352 HSFY1Q96LI6 401 aa11.57□□□□□ -0.56
HDAC6-233ENST00000489352 CLIC6Q96NY7 704 aa11.57□□□□□ -0.56
HDAC6-233ENST00000489352 SIK2Q9H0K1 926 aa11.57□□□□□ -0.56
HDAC6-233ENST00000489352 FGF22Q9HCT0 170 aa11.57□□□□□ -0.56
HDAC6-233ENST00000489352 ST7Q9NRC1 585 aa11.57□□□□□ -0.56
HDAC6-233ENST00000489352 PDP2Q9P2J9 529 aa11.57□□□□□ -0.56
HDAC6-233ENST00000489352 FCF1Q9Y324 198 aaKnown RBP11.57□□□□□ -0.56
HDAC6-233ENST00000489352 SRPRBQ9Y5M8 271 aaKnown RBP11.57□□□□□ -0.56
HDAC6-233ENST00000489352 A0A0D9SEW6 157 aa11.56□□□□□ -0.56
HDAC6-233ENST00000489352 SSU72P8A0A1W2PR75 194 aa11.56□□□□□ -0.56
HDAC6-233ENST00000489352 M0QYV0 167 aa11.56□□□□□ -0.56
HDAC6-233ENST00000489352 PDE2AO00408 941 aaPredicted RBP11.56□□□□□ -0.56
HDAC6-233ENST00000489352 GRID2O43424 1007 aa11.56□□□□□ -0.56
HDAC6-233ENST00000489352 ZNF821O75541 412 aaPredicted RBP11.56□□□□□ -0.56
HDAC6-233ENST00000489352 NDUFA10O95299 355 aa11.56□□□□□ -0.56
HDAC6-233ENST00000489352 POP4O95707 220 aaKnown RBP11.56□□□□□ -0.56
HDAC6-233ENST00000489352 ZNF28P17035 718 aa11.56□□□□□ -0.56
HDAC6-233ENST00000489352 BMP6P22004 513 aa11.56□□□□□ -0.56
HDAC6-233ENST00000489352 OR1E1P30953 314 aa11.56□□□□□ -0.56
HDAC6-233ENST00000489352 IRAK1P51617 712 aa11.56□□□□□ -0.56
HDAC6-233ENST00000489352 SNRPD1P62314 119 aaKnown RBP11.56□□□□□ -0.56
HDAC6-233ENST00000489352 PPP2R2AP63151 447 aa11.56□□□□□ -0.56
HDAC6-233ENST00000489352 ELP6Q0PNE2 266 aa11.56□□□□□ -0.56
HDAC6-233ENST00000489352 KCTD16Q68DU8 428 aa11.56□□□□□ -0.56
HDAC6-233ENST00000489352 SLC30A9Q6PML9 568 aa11.56□□□□□ -0.56
HDAC6-233ENST00000489352 LCLAT1Q6UWP7 414 aa11.56□□□□□ -0.56
HDAC6-233ENST00000489352 GDPD4Q6W3E5 623 aa11.56□□□□□ -0.56
HDAC6-233ENST00000489352 SLC9A9Q8IVB4 645 aa11.56□□□□□ -0.56
HDAC6-233ENST00000489352 CT55Q8WUE5 264 aa11.56□□□□□ -0.56
HDAC6-233ENST00000489352 PATE1Q8WXA2 126 aa11.56□□□□□ -0.56
HDAC6-233ENST00000489352 TMUB1Q9BVT8 246 aa11.56□□□□□ -0.56
HDAC6-233ENST00000489352 NUDT9Q9BW91 350 aa11.56□□□□□ -0.56
HDAC6-233ENST00000489352 GPR87Q9BY21 358 aa11.56□□□□□ -0.56
HDAC6-233ENST00000489352 CARS2Q9HA77 564 aaKnown RBP11.56□□□□□ -0.56
HDAC6-233ENST00000489352 POPDC2Q9HBU9 364 aa11.56□□□□□ -0.56
HDAC6-233ENST00000489352 USP25Q9UHP3 1055 aa11.56□□□□□ -0.56
HDAC6-233ENST00000489352 PRSS38A1L453 326 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms