RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 FAM71BQ8TC56 605 aa14.09□□□□□ -0.15
VTI1A-206ENST00000489142 SMIM14Q96QK8 99 aa14.09□□□□□ -0.15
VTI1A-206ENST00000489142 MGME1Q9BQP7 344 aa14.09□□□□□ -0.15
VTI1A-206ENST00000489142 LRRC61Q9BV99 259 aa14.09□□□□□ -0.15
VTI1A-206ENST00000489142 NHEJ1Q9H9Q4 299 aaPredicted RBP14.09□□□□□ -0.15
VTI1A-206ENST00000489142 B4GALT6Q9UBX8 382 aa14.09□□□□□ -0.15
VTI1A-206ENST00000489142 RAXQ9Y2V3 346 aa14.09□□□□□ -0.15
VTI1A-206ENST00000489142 DSPP15924 2871 aaKnown RBP14.09□□□□□ -0.15
VTI1A-206ENST00000489142 ANKRD11Q6UB99 2663 aaPredicted RBP14.08□□□□□ -0.15
VTI1A-206ENST00000489142 APC2O95996 2303 aa14.08□□□□□ -0.16
VTI1A-206ENST00000489142 SSU72P8A0A1W2PR75 194 aa14.08□□□□□ -0.16
VTI1A-206ENST00000489142 CPED1A4D0V7 1026 aa14.08□□□□□ -0.16
VTI1A-206ENST00000489142 CASC3O15234 703 aaKnown RBP14.08□□□□□ -0.16
VTI1A-206ENST00000489142 RECQL5O94762 991 aaPredicted RBP14.08□□□□□ -0.16
VTI1A-206ENST00000489142 CPP00450 1065 aa14.08□□□□□ -0.16
VTI1A-206ENST00000489142 TMEM253P0C7T8 217 aa14.08□□□□□ -0.16
VTI1A-206ENST00000489142 CKMT1AP12532 417 aa14.08□□□□□ -0.16
VTI1A-206ENST00000489142 YPEL5P62699 121 aa14.08□□□□□ -0.16
VTI1A-206ENST00000489142 PPARDQ03181 441 aa14.08□□□□□ -0.16
VTI1A-206ENST00000489142 GBE1Q04446 702 aa14.08□□□□□ -0.16
VTI1A-206ENST00000489142 ITKQ08881 620 aa14.08□□□□□ -0.16
VTI1A-206ENST00000489142 ACOX1Q15067 660 aa14.08□□□□□ -0.16
VTI1A-206ENST00000489142 TSR1Q2NL82 804 aaKnown RBP14.08□□□□□ -0.16
VTI1A-206ENST00000489142 ALG11Q2TAA5 492 aa14.08□□□□□ -0.16
VTI1A-206ENST00000489142 MARC1Q5VT66 337 aa14.08□□□□□ -0.16
VTI1A-206ENST00000489142 GUSBP11Q6P575 273 aa14.08□□□□□ -0.16
VTI1A-206ENST00000489142 CRTC1Q6UUV9 634 aa14.08□□□□□ -0.16
VTI1A-206ENST00000489142 ENPP7Q6UWV6 458 aa14.08□□□□□ -0.16
VTI1A-206ENST00000489142 DPPA4Q7L190 304 aa14.08□□□□□ -0.16
VTI1A-206ENST00000489142 SLC35G2Q8TBE7 412 aa14.08□□□□□ -0.16
VTI1A-206ENST00000489142 IFI44Q8TCB0 444 aa14.08□□□□□ -0.16
VTI1A-206ENST00000489142 NSMCE1Q8WV22 266 aa14.08□□□□□ -0.16
VTI1A-206ENST00000489142 RAPGEF5Q92565 580 aa14.08□□□□□ -0.16
VTI1A-206ENST00000489142 NUDCD1Q96RS6 583 aa14.08□□□□□ -0.16
VTI1A-206ENST00000489142 IL12RB2Q99665 862 aa14.08□□□□□ -0.16
VTI1A-206ENST00000489142 APOOQ9BUR5 198 aa14.08□□□□□ -0.16
VTI1A-206ENST00000489142 SLC13A1Q9BZW2 595 aa14.08□□□□□ -0.16
VTI1A-206ENST00000489142 CLPBQ9H078 707 aa14.08□□□□□ -0.16
VTI1A-206ENST00000489142 RCOR3Q9P2K3 495 aaPredicted RBP14.08□□□□□ -0.16
VTI1A-206ENST00000489142 SPASTQ9UBP0 616 aa14.08□□□□□ -0.16
VTI1A-206ENST00000489142 HYOU1Q9Y4L1 999 aa14.08□□□□□ -0.16
VTI1A-206ENST00000489142 TTLL3Q9Y4R7 772 aa14.08□□□□□ -0.16
VTI1A-206ENST00000489142 ASXL3Q9C0F0 2248 aa14.08□□□□□ -0.16
VTI1A-206ENST00000489142 CHD6Q8TD26 2715 aa14.08□□□□□ -0.16
VTI1A-206ENST00000489142 COL27A1Q8IZC6 1860 aaPredicted RBP14.08□□□□□ -0.16
VTI1A-206ENST00000489142 KNTC1P50748 2209 aa14.07□□□□□ -0.16
VTI1A-206ENST00000489142 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.07□□□□□ -0.16
VTI1A-206ENST00000489142 HTRA2O43464 458 aaPredicted RBP14.07□□□□□ -0.16
VTI1A-206ENST00000489142 TNNT1P13805 278 aa14.07□□□□□ -0.16
VTI1A-206ENST00000489142 TSHRP16473 764 aa14.07□□□□□ -0.16
VTI1A-206ENST00000489142 CTPS1P17812 591 aa14.07□□□□□ -0.16
VTI1A-206ENST00000489142 HSPA9P38646 679 aaKnown RBP14.07□□□□□ -0.16
VTI1A-206ENST00000489142 GARSP41250 739 aaKnown RBP14.07□□□□□ -0.16
VTI1A-206ENST00000489142 GALNT2Q10471 571 aa14.07□□□□□ -0.16
VTI1A-206ENST00000489142 ILKQ13418 452 aa14.07□□□□□ -0.16
VTI1A-206ENST00000489142 NFATC4Q14934 902 aa14.07□□□□□ -0.16
VTI1A-206ENST00000489142 PAFAH1B3Q15102 231 aaKnown RBP14.07□□□□□ -0.16
VTI1A-206ENST00000489142 ZCCHC8Q6NZY4 707 aaKnown RBP14.07□□□□□ -0.16
VTI1A-206ENST00000489142 C19orf48Q6RUI8 117 aa14.07□□□□□ -0.16
VTI1A-206ENST00000489142 TSPAN33Q86UF1 283 aa14.07□□□□□ -0.16
VTI1A-206ENST00000489142 BBS5Q8N3I7 341 aa14.07□□□□□ -0.16
VTI1A-206ENST00000489142 PQLC3Q8N755 202 aa14.07□□□□□ -0.16
VTI1A-206ENST00000489142 PDCD7Q8N8D1 485 aaKnown RBP14.07□□□□□ -0.16
VTI1A-206ENST00000489142 FAM181AQ8N9Y4 354 aa14.07□□□□□ -0.16
VTI1A-206ENST00000489142 BTN2A2Q8WVV5 523 aa14.07□□□□□ -0.16
VTI1A-206ENST00000489142 PDXPQ96GD0 296 aa14.07□□□□□ -0.16
VTI1A-206ENST00000489142 CCDC42Q96M95 316 aa14.07□□□□□ -0.16
VTI1A-206ENST00000489142 SEMA3CQ99985 751 aa14.07□□□□□ -0.16
VTI1A-206ENST00000489142 DUSP23Q9BVJ7 150 aa14.07□□□□□ -0.16
VTI1A-206ENST00000489142 MRPL40Q9NQ50 206 aaKnown RBP14.07□□□□□ -0.16
VTI1A-206ENST00000489142 SIRPGQ9P1W8 387 aa14.07□□□□□ -0.16
VTI1A-206ENST00000489142 CLCA2Q9UQC9 943 aa14.07□□□□□ -0.16
VTI1A-206ENST00000489142 PCDHB1Q9Y5F3 818 aa14.07□□□□□ -0.16
VTI1A-206ENST00000489142 RP1P56715 2156 aa14.07□□□□□ -0.16
VTI1A-206ENST00000489142 LAMA5O15230 3695 aa14.07□□□□□ -0.16
VTI1A-206ENST00000489142 ADAMTS20P59510 1910 aa14.07□□□□□ -0.16
VTI1A-206ENST00000489142 ACACAQ13085 2346 aa14.06□□□□□ -0.16
VTI1A-206ENST00000489142 LRRD1A4D1F6 860 aa14.06□□□□□ -0.16
VTI1A-206ENST00000489142 NPIPB15A6NHN6 443 aaPredicted RBP14.06□□□□□ -0.16
VTI1A-206ENST00000489142 OPA1O60313 960 aa14.06□□□□□ -0.16
VTI1A-206ENST00000489142 MT-CO3P00414 261 aa14.06□□□□□ -0.16
VTI1A-206ENST00000489142 ANXA6P08133 673 aa14.06□□□□□ -0.16
VTI1A-206ENST00000489142 KRT7P08729 469 aa14.06□□□□□ -0.16
VTI1A-206ENST00000489142 ALPIP09923 528 aa14.06□□□□□ -0.16
VTI1A-206ENST00000489142 CDK4P11802 303 aa14.06□□□□□ -0.16
VTI1A-206ENST00000489142 LHCGRP22888 699 aa14.06□□□□□ -0.16
VTI1A-206ENST00000489142 POLR2LP62875 67 aaKnown RBP14.06□□□□□ -0.16
VTI1A-206ENST00000489142 DSC2Q02487 901 aa14.06□□□□□ -0.16
VTI1A-206ENST00000489142 SLC10A2Q12908 348 aaPredicted RBP14.06□□□□□ -0.16
VTI1A-206ENST00000489142 IHHQ14623 411 aa14.06□□□□□ -0.16
VTI1A-206ENST00000489142 PDK2Q15119 407 aa14.06□□□□□ -0.16
VTI1A-206ENST00000489142 CNGA3Q16281 694 aa14.06□□□□□ -0.16
VTI1A-206ENST00000489142 EFL1Q7Z2Z2 1120 aaKnown RBP14.06□□□□□ -0.16
VTI1A-206ENST00000489142 FUBP1Q96AE4 644 aaKnown RBP14.06□□□□□ -0.16
VTI1A-206ENST00000489142 ZNF670Q9BS34 389 aa14.06□□□□□ -0.16
VTI1A-206ENST00000489142 SUDS3Q9H7L9 328 aaPredicted RBP14.06□□□□□ -0.16
VTI1A-206ENST00000489142 KLQ9UEF7 1012 aa14.06□□□□□ -0.16
VTI1A-206ENST00000489142 RAI2Q9Y5P3 530 aa14.06□□□□□ -0.16
VTI1A-206ENST00000489142 AK5Q9Y6K8 562 aa14.06□□□□□ -0.16
VTI1A-206ENST00000489142 CSNK1G3Q9Y6M4 447 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms