RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 ALPIP09923 528 aa9.17□□□□□ -0.94
HDAC6-232ENST00000489053 VIPR1P32241 457 aa9.17□□□□□ -0.94
HDAC6-232ENST00000489053 IGFALSP35858 605 aa9.17□□□□□ -0.94
HDAC6-232ENST00000489053 PEX5P50542 639 aa9.17□□□□□ -0.94
HDAC6-232ENST00000489053 PFN3P60673 137 aa9.17□□□□□ -0.94
HDAC6-232ENST00000489053 DYNLT1P63172 113 aa9.17□□□□□ -0.94
HDAC6-232ENST00000489053 AP1B1Q10567 949 aa9.17□□□□□ -0.94
HDAC6-232ENST00000489053 BIRC2Q13490 618 aa9.17□□□□□ -0.94
HDAC6-232ENST00000489053 MTM1Q13496 603 aa9.17□□□□□ -0.94
HDAC6-232ENST00000489053 NFATC4Q14934 902 aa9.17□□□□□ -0.94
HDAC6-232ENST00000489053 PDK1Q15118 436 aa9.17□□□□□ -0.94
HDAC6-232ENST00000489053 NR0B2Q15466 257 aa9.17□□□□□ -0.94
HDAC6-232ENST00000489053 ZCCHC8Q6NZY4 707 aaKnown RBP9.17□□□□□ -0.94
HDAC6-232ENST00000489053 ENPP7Q6UWV6 458 aa9.17□□□□□ -0.94
HDAC6-232ENST00000489053 CCNI2Q6ZMN8 369 aaPredicted RBP9.17□□□□□ -0.94
HDAC6-232ENST00000489053 BZW1Q7L1Q6 419 aaKnown RBP9.17□□□□□ -0.94
HDAC6-232ENST00000489053 GKN2Q86XP6 184 aa9.17□□□□□ -0.94
HDAC6-232ENST00000489053 CCDC50Q8IVM0 306 aa9.17□□□□□ -0.94
HDAC6-232ENST00000489053 CCDC170Q8IYT3 715 aa9.17□□□□□ -0.94
HDAC6-232ENST00000489053 TXLNBQ8N3L3 684 aa9.17□□□□□ -0.94
HDAC6-232ENST00000489053 SLC25A45Q8N413 288 aa9.17□□□□□ -0.94
HDAC6-232ENST00000489053 FSTL5Q8N475 847 aaPredicted RBP9.17□□□□□ -0.94
HDAC6-232ENST00000489053 PDCD7Q8N8D1 485 aaKnown RBP9.17□□□□□ -0.94
HDAC6-232ENST00000489053 MAPK15Q8TD08 544 aa9.17□□□□□ -0.94
HDAC6-232ENST00000489053 TSC1Q92574 1164 aa9.17□□□□□ -0.94
HDAC6-232ENST00000489053 CENPTQ96BT3 561 aa9.17□□□□□ -0.94
HDAC6-232ENST00000489053 NXPE2Q96DL1 559 aa9.17□□□□□ -0.94
HDAC6-232ENST00000489053 NUS1Q96E22 293 aa9.17□□□□□ -0.94
HDAC6-232ENST00000489053 KLF6Q99612 283 aaPredicted RBP9.17□□□□□ -0.94
HDAC6-232ENST00000489053 SEMA3CQ99985 751 aa9.17□□□□□ -0.94
HDAC6-232ENST00000489053 FERMT1Q9BQL6 677 aa9.17□□□□□ -0.94
HDAC6-232ENST00000489053 MGME1Q9BQP7 344 aa9.17□□□□□ -0.94
HDAC6-232ENST00000489053 NOD2Q9HC29 1040 aa9.17□□□□□ -0.94
HDAC6-232ENST00000489053 UCKL1Q9NWZ5 548 aa9.17□□□□□ -0.94
HDAC6-232ENST00000489053 B4GALT6Q9UBX8 382 aa9.17□□□□□ -0.94
HDAC6-232ENST00000489053 DNPEPQ9ULA0 475 aa9.17□□□□□ -0.94
HDAC6-232ENST00000489053 PHTF1Q9UMS5 762 aa9.17□□□□□ -0.94
HDAC6-232ENST00000489053 RAI2Q9Y5P3 530 aa9.17□□□□□ -0.94
HDAC6-232ENST00000489053 CSNK1G3Q9Y6M4 447 aa9.17□□□□□ -0.94
HDAC6-232ENST00000489053 DOCK4Q8N1I0 1966 aa9.17□□□□□ -0.94
HDAC6-232ENST00000489053 CHD6Q8TD26 2715 aa9.17□□□□□ -0.94
HDAC6-232ENST00000489053 ZZEF1O43149 2961 aa9.16□□□□□ -0.94
HDAC6-232ENST00000489053 CPED1A4D0V7 1026 aa9.16□□□□□ -0.94
HDAC6-232ENST00000489053 K7ESM1 405 aa9.16□□□□□ -0.94
HDAC6-232ENST00000489053 TRIM38O00635 465 aa9.16□□□□□ -0.94
HDAC6-232ENST00000489053 MUSKO15146 869 aa9.16□□□□□ -0.94
HDAC6-232ENST00000489053 SPINT1O43278 529 aa9.16□□□□□ -0.94
HDAC6-232ENST00000489053 MAP3K6O95382 1288 aa9.16□□□□□ -0.94
HDAC6-232ENST00000489053 TNFP01375 233 aa9.16□□□□□ -0.94
HDAC6-232ENST00000489053 CKMT1AP12532 417 aa9.16□□□□□ -0.94
HDAC6-232ENST00000489053 CCNB1P14635 433 aa9.16□□□□□ -0.94
HDAC6-232ENST00000489053 KDELR1P24390 212 aa9.16□□□□□ -0.94
HDAC6-232ENST00000489053 CCNCP24863 283 aa9.16□□□□□ -0.94
HDAC6-232ENST00000489053 CETN2P41208 172 aa9.16□□□□□ -0.94
HDAC6-232ENST00000489053 ACADVLP49748 655 aa9.16□□□□□ -0.94
HDAC6-232ENST00000489053 ZNF75DP51815 510 aa9.16□□□□□ -0.94
HDAC6-232ENST00000489053 TAS2R40P59535 323 aa9.16□□□□□ -0.94
HDAC6-232ENST00000489053 SRP54P61011 504 aaKnown RBP9.16□□□□□ -0.94
HDAC6-232ENST00000489053 GALNT2Q10471 571 aa9.16□□□□□ -0.94
HDAC6-232ENST00000489053 TFDP2Q14188 446 aa9.16□□□□□ -0.94
HDAC6-232ENST00000489053 INPP5AQ14642 412 aa9.16□□□□□ -0.94
HDAC6-232ENST00000489053 PAFAH1B3Q15102 231 aaKnown RBP9.16□□□□□ -0.94
HDAC6-232ENST00000489053 TCEA2Q15560 299 aa9.16□□□□□ -0.94
HDAC6-232ENST00000489053 SMAD1Q15797 465 aaKnown RBP9.16□□□□□ -0.94
HDAC6-232ENST00000489053 ASTE1Q2TB18 679 aaPredicted RBP9.16□□□□□ -0.94
HDAC6-232ENST00000489053 DEFB133Q30KQ1 61 aa9.16□□□□□ -0.94
HDAC6-232ENST00000489053 PROX2Q3B8N5 592 aa9.16□□□□□ -0.94
HDAC6-232ENST00000489053 ATP13A4Q4VNC1 1196 aa9.16□□□□□ -0.94
HDAC6-232ENST00000489053 HES3Q5TGS1 186 aa9.16□□□□□ -0.94
HDAC6-232ENST00000489053 NCBP2-AS2Q69YL0 99 aa9.16□□□□□ -0.94
HDAC6-232ENST00000489053 CCDC70Q6NSX1 233 aa9.16□□□□□ -0.94
HDAC6-232ENST00000489053 TP53INP2Q8IXH6 220 aa9.16□□□□□ -0.94
HDAC6-232ENST00000489053 CCDC13Q8IYE1 715 aa9.16□□□□□ -0.94
HDAC6-232ENST00000489053 TP53I13Q8NBR0 393 aaPredicted RBP9.16□□□□□ -0.94
HDAC6-232ENST00000489053 PCDH19Q8TAB3 1148 aa9.16□□□□□ -0.94
HDAC6-232ENST00000489053 GATA6Q92908 595 aa9.16□□□□□ -0.94
HDAC6-232ENST00000489053 APOLD1Q96LR9 279 aa9.16□□□□□ -0.94
HDAC6-232ENST00000489053 WDR92Q96MX6 357 aa9.16□□□□□ -0.94
HDAC6-232ENST00000489053 APOOQ9BUR5 198 aa9.16□□□□□ -0.94
HDAC6-232ENST00000489053 ADGRE3Q9BY15 652 aa9.16□□□□□ -0.94
HDAC6-232ENST00000489053 SUDS3Q9H7L9 328 aaPredicted RBP9.16□□□□□ -0.94
HDAC6-232ENST00000489053 MBNL1Q9NR56 388 aaKnown RBP9.16□□□□□ -0.94
HDAC6-232ENST00000489053 PHPT1Q9NRX4 125 aaPredicted RBP9.16□□□□□ -0.94
HDAC6-232ENST00000489053 TOR4AQ9NXH8 423 aa9.16□□□□□ -0.94
HDAC6-232ENST00000489053 AMACRQ9UHK6 382 aa9.16□□□□□ -0.94
HDAC6-232ENST00000489053 ZMIZ1Q9ULJ6 1067 aa9.16□□□□□ -0.94
HDAC6-232ENST00000489053 WASF3Q9UPY6 502 aa9.16□□□□□ -0.94
HDAC6-232ENST00000489053 CLCA2Q9UQC9 943 aa9.16□□□□□ -0.94
HDAC6-232ENST00000489053 OR1A2Q9Y585 309 aa9.16□□□□□ -0.94
HDAC6-232ENST00000489053 AK5Q9Y6K8 562 aa9.16□□□□□ -0.94
HDAC6-232ENST00000489053 NYNRINQ9P2P1 1898 aaKnown RBP9.16□□□□□ -0.94
HDAC6-232ENST00000489053 PCNX2A6NKB5 2137 aa9.16□□□□□ -0.94
HDAC6-232ENST00000489053 FREM2Q5SZK8 3169 aa9.16□□□□□ -0.94
HDAC6-232ENST00000489053 PLXNA2O75051 1894 aa9.15□□□□□ -0.94
HDAC6-232ENST00000489053 FAM221BA6H8Z2 402 aa9.15□□□□□ -0.94
HDAC6-232ENST00000489053 LMO7DNF2Z398 122 aa9.15□□□□□ -0.94
HDAC6-232ENST00000489053 TPP1O14773 563 aa9.15□□□□□ -0.94
HDAC6-232ENST00000489053 MTA2O94776 668 aa9.15□□□□□ -0.94
HDAC6-232ENST00000489053 PGLSO95336 258 aa9.15□□□□□ -0.94
HDAC6-232ENST00000489053 JCHAINP01591 159 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms