RNA–Protein interactions for RNA: ENST00000488973.6

HMG20B-213, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 2,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-213ENST00000488973 SMUG1Q53HV7 270 aa19.61■□□□□ 0.73
HMG20B-213ENST00000488973 SLC2A7Q6PXP3 512 aa19.61■□□□□ 0.73
HMG20B-213ENST00000488973 CAMK1DQ8IU85 385 aa19.61■□□□□ 0.73
HMG20B-213ENST00000488973 CANT1Q8WVQ1 401 aa19.61■□□□□ 0.73
HMG20B-213ENST00000488973 CCM2LQ9NUG4 571 aaPredicted RBP19.61■□□□□ 0.73
HMG20B-213ENST00000488973 MTF2Q9Y483 593 aaPredicted RBP19.61■□□□□ 0.73
HMG20B-213ENST00000488973 A0A0G2JLL6 359 aaPredicted RBP19.6■□□□□ 0.73
HMG20B-213ENST00000488973 TRIM64A6NGJ6 449 aa19.6■□□□□ 0.73
HMG20B-213ENST00000488973 A8MT66 165 aa19.6■□□□□ 0.73
HMG20B-213ENST00000488973 CXCL11O14625 94 aa19.6■□□□□ 0.73
HMG20B-213ENST00000488973 STT3AP46977 705 aa19.6■□□□□ 0.73
HMG20B-213ENST00000488973 SLC7A2P52569 658 aa19.6■□□□□ 0.73
HMG20B-213ENST00000488973 NME5P56597 212 aa19.6■□□□□ 0.73
HMG20B-213ENST00000488973 DAOAP59103 153 aa19.6■□□□□ 0.73
HMG20B-213ENST00000488973 NEPROQ6NW34 567 aa19.6■□□□□ 0.73
HMG20B-213ENST00000488973 Q6ZNX1 250 aa19.6■□□□□ 0.73
HMG20B-213ENST00000488973 PRRT2Q7Z6L0 340 aaPredicted RBP19.6■□□□□ 0.73
HMG20B-213ENST00000488973 CLVS1Q8IUQ0 354 aaPredicted RBP19.6■□□□□ 0.73
HMG20B-213ENST00000488973 ANKRD13AQ8IZ07 590 aa19.6■□□□□ 0.73
HMG20B-213ENST00000488973 TOP6BLQ8N6T0 577 aa19.6■□□□□ 0.73
HMG20B-213ENST00000488973 LSM14AQ8ND56 463 aaKnown RBP19.6■□□□□ 0.73
HMG20B-213ENST00000488973 ULBP1Q9BZM6 244 aa19.6■□□□□ 0.73
HMG20B-213ENST00000488973 ADAMTS10Q9H324 1103 aa19.6■□□□□ 0.73
HMG20B-213ENST00000488973 TNFRSF12AQ9NP84 129 aa19.6■□□□□ 0.73
HMG20B-213ENST00000488973 RBPJLQ9UBG7 517 aa19.6■□□□□ 0.73
HMG20B-213ENST00000488973 CDH7Q9ULB5 785 aa19.6■□□□□ 0.73
HMG20B-213ENST00000488973 TCAF1Q9Y4C2 921 aa19.6■□□□□ 0.73
HMG20B-213ENST00000488973 SPO11Q9Y5K1 396 aa19.6■□□□□ 0.73
HMG20B-213ENST00000488973 YJEFN3A6XGL0 299 aa19.6■□□□□ 0.73
HMG20B-213ENST00000488973 H3BRB1 525 aa19.6■□□□□ 0.73
HMG20B-213ENST00000488973 MAGEB3O15480 346 aa19.6■□□□□ 0.73
HMG20B-213ENST00000488973 ANXA9O76027 345 aa19.6■□□□□ 0.73
HMG20B-213ENST00000488973 CPB1P15086 417 aa19.6■□□□□ 0.73
HMG20B-213ENST00000488973 ARSAP15289 507 aa19.6■□□□□ 0.73
HMG20B-213ENST00000488973 PAMP19021 973 aa19.6■□□□□ 0.73
HMG20B-213ENST00000488973 AKAP5P24588 427 aa19.6■□□□□ 0.73
HMG20B-213ENST00000488973 GRIA3P42263 894 aa19.6■□□□□ 0.73
HMG20B-213ENST00000488973 AGAP9Q5VTM2 703 aa19.6■□□□□ 0.73
HMG20B-213ENST00000488973 LZTR1Q8N653 840 aa19.6■□□□□ 0.73
HMG20B-213ENST00000488973 PCYOX1LQ8NBM8 494 aa19.6■□□□□ 0.73
HMG20B-213ENST00000488973 SPATA22Q8NHS9 363 aa19.6■□□□□ 0.73
HMG20B-213ENST00000488973 FCRL5Q96RD9 977 aa19.6■□□□□ 0.73
HMG20B-213ENST00000488973 COLEC11Q9BWP8 271 aa19.6■□□□□ 0.73
HMG20B-213ENST00000488973 TUT1Q9H6E5 874 aaKnown RBP19.6■□□□□ 0.73
HMG20B-213ENST00000488973 CHST12Q9NRB3 414 aa19.6■□□□□ 0.73
HMG20B-213ENST00000488973 DDIT4Q9NX09 232 aa19.6■□□□□ 0.73
HMG20B-213ENST00000488973 OR12D3Q9UGF7 316 aa19.6■□□□□ 0.73
HMG20B-213ENST00000488973 AQP12BA6NM10 295 aa19.59■□□□□ 0.73
HMG20B-213ENST00000488973 F9P00740 461 aa19.59■□□□□ 0.73
HMG20B-213ENST00000488973 S100A1P23297 94 aa19.59■□□□□ 0.73
HMG20B-213ENST00000488973 CSHL1Q14406 222 aa19.59■□□□□ 0.73
HMG20B-213ENST00000488973 BTBD8Q5XKL5 378 aa19.59■□□□□ 0.73
HMG20B-213ENST00000488973 DENND5AQ6IQ26 1287 aa19.59■□□□□ 0.73
HMG20B-213ENST00000488973 TTC33Q6PID6 262 aaPredicted RBP19.59■□□□□ 0.73
HMG20B-213ENST00000488973 LAYNQ6UX15 382 aa19.59■□□□□ 0.73
HMG20B-213ENST00000488973 AQP12AQ8IXF9 295 aa19.59■□□□□ 0.73
HMG20B-213ENST00000488973 SCAIQ8N9R8 606 aa19.59■□□□□ 0.73
HMG20B-213ENST00000488973 HIPK3Q9H422 1215 aa19.59■□□□□ 0.73
HMG20B-213ENST00000488973 CYP4F12Q9HCS2 524 aa19.59■□□□□ 0.73
HMG20B-213ENST00000488973 EBF1Q9UH73 591 aa19.59■□□□□ 0.73
HMG20B-213ENST00000488973 BBIP1A8MTZ0 92 aa19.59■□□□□ 0.73
HMG20B-213ENST00000488973 CBFA2T3O75081 653 aa19.59■□□□□ 0.73
HMG20B-213ENST00000488973 NCAM1P13591 858 aa19.59■□□□□ 0.73
HMG20B-213ENST00000488973 ATP6V1B2P21281 511 aa19.59■□□□□ 0.73
HMG20B-213ENST00000488973 KCNA5P22460 613 aa19.59■□□□□ 0.73
HMG20B-213ENST00000488973 ENTPD1P49961 510 aa19.59■□□□□ 0.73
HMG20B-213ENST00000488973 MAP3K7CLP57077 242 aa19.59■□□□□ 0.73
HMG20B-213ENST00000488973 RAB15P59190 212 aa19.59■□□□□ 0.73
HMG20B-213ENST00000488973 PRAMEP78395 509 aa19.59■□□□□ 0.73
HMG20B-213ENST00000488973 ZNF470Q6ECI4 717 aa19.59■□□□□ 0.73
HMG20B-213ENST00000488973 KIAA0930Q6ICG6 404 aaPredicted RBP19.59■□□□□ 0.73
HMG20B-213ENST00000488973 TAPT1Q6NXT6 567 aa19.59■□□□□ 0.73
HMG20B-213ENST00000488973 LARP4Q71RC2 724 aaKnown RBP eCLIP19.59■□□□□ 0.73
HMG20B-213ENST00000488973 EMID1Q96A84 441 aaPredicted RBP19.59■□□□□ 0.73
HMG20B-213ENST00000488973 C12orf43Q96C57 262 aaKnown RBP19.59■□□□□ 0.73
HMG20B-213ENST00000488973 CDCA5Q96FF9 252 aa19.59■□□□□ 0.73
HMG20B-213ENST00000488973 MED10Q9BTT4 135 aa19.59■□□□□ 0.73
HMG20B-213ENST00000488973 TRIM15Q9C019 465 aa19.59■□□□□ 0.73
HMG20B-213ENST00000488973 TREX1Q9NSU2 369 aa19.59■□□□□ 0.73
HMG20B-213ENST00000488973 SMOXQ9NWM0 555 aa19.59■□□□□ 0.73
HMG20B-213ENST00000488973 FBXO5Q9UKT4 447 aa19.59■□□□□ 0.73
HMG20B-213ENST00000488973 FAM32AQ9Y421 112 aaKnown RBP19.59■□□□□ 0.73
HMG20B-213ENST00000488973 TRAF6Q9Y4K3 522 aa19.59■□□□□ 0.73
HMG20B-213ENST00000488973 DLGAP1O14490 977 aa19.58■□□□□ 0.72
HMG20B-213ENST00000488973 NDUFB5O43674 189 aa19.58■□□□□ 0.72
HMG20B-213ENST00000488973 LRIG2O94898 1065 aa19.58■□□□□ 0.72
HMG20B-213ENST00000488973 RBP1P09455 135 aa19.58■□□□□ 0.72
HMG20B-213ENST00000488973 KCNE1P15382 129 aa19.58■□□□□ 0.72
HMG20B-213ENST00000488973 LILRA4P59901 499 aa19.58■□□□□ 0.72
HMG20B-213ENST00000488973 KIAA0408Q6ZU52 694 aa19.58■□□□□ 0.72
HMG20B-213ENST00000488973 SLC22A9Q8IVM8 553 aa19.58■□□□□ 0.72
HMG20B-213ENST00000488973 GOLM1Q8NBJ4 401 aa19.58■□□□□ 0.72
HMG20B-213ENST00000488973 SHCBP1Q8NEM2 672 aa19.58■□□□□ 0.72
HMG20B-213ENST00000488973 USP33Q8TEY7 942 aa19.58■□□□□ 0.72
HMG20B-213ENST00000488973 ITPKCQ96DU7 683 aa19.58■□□□□ 0.72
HMG20B-213ENST00000488973 GPATCH1Q9BRR8 931 aaKnown RBP19.58■□□□□ 0.72
HMG20B-213ENST00000488973 TRMOQ9BU70 441 aa19.58■□□□□ 0.72
HMG20B-213ENST00000488973 MROH8Q9H579 483 aa19.58■□□□□ 0.72
HMG20B-213ENST00000488973 WDCPQ9H6R7 721 aa19.58■□□□□ 0.72
HMG20B-213ENST00000488973 CNGB3Q9NQW8 809 aa19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms