RNA–Protein interactions for RNA: ENST00000488733.1

ATP1A1-208, Transcript of ATPase Na+/K+ transporting subunit alpha 1, humanhuman

TSL 2

Gene ATP1A1, Length 1,728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A1-208ENST00000488733 NLE1Q9NVX2 485 aaPredicted RBP20.24■□□□□ 0.83
ATP1A1-208ENST00000488733 LMCD1Q9NZU5 365 aa20.24■□□□□ 0.83
ATP1A1-208ENST00000488733 KLHL14Q9P2G3 628 aa20.24■□□□□ 0.83
ATP1A1-208ENST00000488733 EMCNQ9ULC0 261 aa20.24■□□□□ 0.83
ATP1A1-208ENST00000488733 CLEC4EQ9ULY5 219 aa20.24■□□□□ 0.83
ATP1A1-208ENST00000488733 ARL5AQ9Y689 179 aa20.24■□□□□ 0.83
ATP1A1-208ENST00000488733 FAM95CA0A1B0GW59 222 aa20.23■□□□□ 0.83
ATP1A1-208ENST00000488733 PROCP04070 461 aa20.23■□□□□ 0.83
ATP1A1-208ENST00000488733 ABCG1P45844 678 aa20.23■□□□□ 0.83
ATP1A1-208ENST00000488733 CLCN5P51795 746 aa20.23■□□□□ 0.83
ATP1A1-208ENST00000488733 POU4F1Q01851 419 aa20.23■□□□□ 0.83
ATP1A1-208ENST00000488733 TRAF2Q12933 501 aa20.23■□□□□ 0.83
ATP1A1-208ENST00000488733 PITRM1Q5JRX3 1037 aa20.23■□□□□ 0.83
ATP1A1-208ENST00000488733 MRNIPQ6NTE8 343 aa20.23■□□□□ 0.83
ATP1A1-208ENST00000488733 SYCE2Q6PIF2 218 aa20.23■□□□□ 0.83
ATP1A1-208ENST00000488733 PTAR1Q7Z6K3 402 aaPredicted RBP20.23■□□□□ 0.83
ATP1A1-208ENST00000488733 TMEM25Q86YD3 366 aa20.23■□□□□ 0.83
ATP1A1-208ENST00000488733 CILP2Q8IUL8 1156 aa20.23■□□□□ 0.83
ATP1A1-208ENST00000488733 ARID3BQ8IVW6 561 aaPredicted RBP20.23■□□□□ 0.83
ATP1A1-208ENST00000488733 OTUD6BQ8N6M0 293 aa20.23■□□□□ 0.83
ATP1A1-208ENST00000488733 SCG3Q8WXD2 468 aaKnown RBP20.23■□□□□ 0.83
ATP1A1-208ENST00000488733 TBATAQ96M53 351 aa20.23■□□□□ 0.83
ATP1A1-208ENST00000488733 SPHK2Q9NRA0 654 aa20.23■□□□□ 0.83
ATP1A1-208ENST00000488733 KCTD3Q9Y597 815 aa20.23■□□□□ 0.83
ATP1A1-208ENST00000488733 HAUS5O94927 633 aa20.22■□□□□ 0.83
ATP1A1-208ENST00000488733 APOA4P06727 396 aa20.22■□□□□ 0.83
ATP1A1-208ENST00000488733 PDHA1P08559 390 aa20.22■□□□□ 0.83
ATP1A1-208ENST00000488733 TROVE2P10155 538 aaKnown RBP eCLIP20.22■□□□□ 0.83
ATP1A1-208ENST00000488733 STMN1P16949 149 aa20.22■□□□□ 0.83
ATP1A1-208ENST00000488733 FSHRP23945 695 aa20.22■□□□□ 0.83
ATP1A1-208ENST00000488733 WEE1P30291 646 aa20.22■□□□□ 0.83
ATP1A1-208ENST00000488733 ARSDP51689 593 aa20.22■□□□□ 0.83
ATP1A1-208ENST00000488733 SLC12A2P55011 1212 aa20.22■□□□□ 0.83
ATP1A1-208ENST00000488733 RAB10P61026 200 aa20.22■□□□□ 0.83
ATP1A1-208ENST00000488733 RPL26P61254 145 aaKnown RBP20.22■□□□□ 0.83
ATP1A1-208ENST00000488733 DMC1Q14565 340 aa20.22■□□□□ 0.83
ATP1A1-208ENST00000488733 CCDC121Q6ZUS5 278 aa20.22■□□□□ 0.83
ATP1A1-208ENST00000488733 GLT6D1Q7Z4J2 308 aa20.22■□□□□ 0.83
ATP1A1-208ENST00000488733 RIN3Q8TB24 985 aa20.22■□□□□ 0.83
ATP1A1-208ENST00000488733 DNAJC1Q96KC8 554 aaKnown RBP20.22■□□□□ 0.83
ATP1A1-208ENST00000488733 BBS2Q9BXC9 721 aa20.22■□□□□ 0.83
ATP1A1-208ENST00000488733 TMEM216Q9P0N5 145 aa20.22■□□□□ 0.83
ATP1A1-208ENST00000488733 MID2Q9UJV3 735 aa20.22■□□□□ 0.83
ATP1A1-208ENST00000488733 INTS6Q9UL03 887 aaKnown RBP20.22■□□□□ 0.83
ATP1A1-208ENST00000488733 RPL26L1Q9UNX3 145 aaKnown RBP20.22■□□□□ 0.83
ATP1A1-208ENST00000488733 TRIOBPQ9H2D6 2365 aa20.22■□□□□ 0.83
ATP1A1-208ENST00000488733 CCT8L1PA6NM43 557 aa20.22■□□□□ 0.83
ATP1A1-208ENST00000488733 FZD6O60353 706 aa20.22■□□□□ 0.83
ATP1A1-208ENST00000488733 TGDSO95455 350 aa20.22■□□□□ 0.83
ATP1A1-208ENST00000488733 IGSF6O95976 241 aa20.22■□□□□ 0.83
ATP1A1-208ENST00000488733 TOP3BO95985 862 aaKnown RBP20.22■□□□□ 0.83
ATP1A1-208ENST00000488733 PIRTP0C851 137 aa20.22■□□□□ 0.83
ATP1A1-208ENST00000488733 TMPRSS15P98073 1019 aa20.22■□□□□ 0.83
ATP1A1-208ENST00000488733 ADAM15Q13444 863 aa20.22■□□□□ 0.83
ATP1A1-208ENST00000488733 C16orf46Q6P387 395 aa20.22■□□□□ 0.83
ATP1A1-208ENST00000488733 SDCCAG8Q86SQ7 713 aaPredicted RBP20.22■□□□□ 0.83
ATP1A1-208ENST00000488733 ACVR1CQ8NER5 493 aa20.22■□□□□ 0.83
ATP1A1-208ENST00000488733 ZNF398Q8TD17 642 aa20.22■□□□□ 0.83
ATP1A1-208ENST00000488733 ISG20Q96AZ6 181 aaKnown RBP20.22■□□□□ 0.83
ATP1A1-208ENST00000488733 TSPAN17Q96FV3 270 aa20.22■□□□□ 0.83
ATP1A1-208ENST00000488733 CDKN2AIPNLQ96HQ2 116 aa20.22■□□□□ 0.83
ATP1A1-208ENST00000488733 TTYH1Q9H313 450 aaPredicted RBP20.22■□□□□ 0.83
ATP1A1-208ENST00000488733 CDH22Q9UJ99 828 aa20.22■□□□□ 0.83
ATP1A1-208ENST00000488733 ACOT9Q9Y305 439 aa20.22■□□□□ 0.83
ATP1A1-208ENST00000488733 SPO11Q9Y5K1 396 aa20.22■□□□□ 0.83
ATP1A1-208ENST00000488733 PRRC2BQ5JSZ5 2229 aaKnown RBP20.21■□□□□ 0.83
ATP1A1-208ENST00000488733 TMEM265A0A087WTH1 108 aa20.21■□□□□ 0.83
ATP1A1-208ENST00000488733 NEDD8-MDP1E9PL57 170 aa20.21■□□□□ 0.83
ATP1A1-208ENST00000488733 K7ERQ8 282 aa20.21■□□□□ 0.83
ATP1A1-208ENST00000488733 CD3EAPO15446 510 aaKnown RBP20.21■□□□□ 0.83
ATP1A1-208ENST00000488733 SMAD6O43541 496 aaKnown RBP20.21■□□□□ 0.83
ATP1A1-208ENST00000488733 PRKCGP05129 697 aa20.21■□□□□ 0.83
ATP1A1-208ENST00000488733 F7P08709 466 aaPredicted RBP20.21■□□□□ 0.83
ATP1A1-208ENST00000488733 HOXB8P17481 243 aaPredicted RBP20.21■□□□□ 0.83
ATP1A1-208ENST00000488733 OGNP20774 298 aaKnown RBP20.21■□□□□ 0.83
ATP1A1-208ENST00000488733 LPOP22079 712 aaPredicted RBP20.21■□□□□ 0.83
ATP1A1-208ENST00000488733 HLA-FP30511 346 aa20.21■□□□□ 0.83
ATP1A1-208ENST00000488733 GRIA4P48058 902 aa20.21■□□□□ 0.83
ATP1A1-208ENST00000488733 ZNF140P52738 457 aaPredicted RBP20.21■□□□□ 0.83
ATP1A1-208ENST00000488733 SULT2A1Q06520 285 aa20.21■□□□□ 0.83
ATP1A1-208ENST00000488733 DLG2Q15700 870 aa20.21■□□□□ 0.83
ATP1A1-208ENST00000488733 CHI3L2Q15782 390 aa20.21■□□□□ 0.83
ATP1A1-208ENST00000488733 FASTKD1Q53R41 847 aaKnown RBP20.21■□□□□ 0.83
ATP1A1-208ENST00000488733 ATXN7L2Q5T6C5 722 aaPredicted RBP20.21■□□□□ 0.83
ATP1A1-208ENST00000488733 ARMC12Q5T9G4 340 aa20.21■□□□□ 0.83
ATP1A1-208ENST00000488733 CCDC91Q7Z6B0 441 aa20.21■□□□□ 0.83
ATP1A1-208ENST00000488733 SLC41A1Q8IVJ1 513 aa20.21■□□□□ 0.83
ATP1A1-208ENST00000488733 NPAS3Q8IXF0 933 aa20.21■□□□□ 0.83
ATP1A1-208ENST00000488733 CELF5Q8N6W0 485 aaKnown RBP20.21■□□□□ 0.83
ATP1A1-208ENST00000488733 OR4L1Q8NH43 312 aa20.21■□□□□ 0.83
ATP1A1-208ENST00000488733 PDCD6IPQ8WUM4 868 aaKnown RBP20.21■□□□□ 0.83
ATP1A1-208ENST00000488733 ELMO2Q96JJ3 720 aa20.21■□□□□ 0.83
ATP1A1-208ENST00000488733 MECRQ9BV79 373 aa20.21■□□□□ 0.83
ATP1A1-208ENST00000488733 SLC2A11Q9BYW1 496 aa20.21■□□□□ 0.83
ATP1A1-208ENST00000488733 KDM4CQ9H3R0 1056 aa20.21■□□□□ 0.83
ATP1A1-208ENST00000488733 FBXO6Q9NRD1 293 aaPredicted RBP20.21■□□□□ 0.83
ATP1A1-208ENST00000488733 MARK1Q9P0L2 795 aa20.21■□□□□ 0.83
ATP1A1-208ENST00000488733 CAMSAP3Q9P1Y5 1249 aaPredicted RBP20.21■□□□□ 0.83
ATP1A1-208ENST00000488733 CORO1CQ9ULV4 474 aaPredicted RBP20.21■□□□□ 0.83
ATP1A1-208ENST00000488733 HS3ST2Q9Y278 367 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms