RNA–Protein interactions for RNA: ENST00000487825.5

BRCA1-217, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-217ENST00000487825 KCNB1Q14721 858 aa5.08□□□□□ -1.6
BRCA1-217ENST00000487825 TMEM266Q2M3C6 531 aa5.08□□□□□ -1.6
BRCA1-217ENST00000487825 ZNF260Q3ZCT1 412 aa5.08□□□□□ -1.6
BRCA1-217ENST00000487825 USH1GQ495M9 461 aa5.08□□□□□ -1.6
BRCA1-217ENST00000487825 TMTC4Q5T4D3 741 aa5.08□□□□□ -1.6
BRCA1-217ENST00000487825 LCE1AQ5T7P2 110 aa5.08□□□□□ -1.6
BRCA1-217ENST00000487825 DAB2IPQ5VWQ8 1189 aa5.08□□□□□ -1.6
BRCA1-217ENST00000487825 AWAT2Q6E213 333 aa5.08□□□□□ -1.6
BRCA1-217ENST00000487825 PARM1Q6UWI2 310 aa5.08□□□□□ -1.6
BRCA1-217ENST00000487825 METTL7BQ6UX53 244 aa5.08□□□□□ -1.6
BRCA1-217ENST00000487825 ZNF852Q6ZMS4 543 aa5.08□□□□□ -1.6
BRCA1-217ENST00000487825 USP49Q70CQ1 688 aa5.08□□□□□ -1.6
BRCA1-217ENST00000487825 GET4Q7L5D6 327 aaPredicted RBP5.08□□□□□ -1.6
BRCA1-217ENST00000487825 CHST15Q7LFX5 561 aaPredicted RBP5.08□□□□□ -1.6
BRCA1-217ENST00000487825 TECPR1Q7Z6L1 1165 aa5.08□□□□□ -1.6
BRCA1-217ENST00000487825 TMEM173Q86WV6 379 aaPredicted RBP5.08□□□□□ -1.6
BRCA1-217ENST00000487825 NRACQ8N912 160 aa5.08□□□□□ -1.6
BRCA1-217ENST00000487825 CUL5Q93034 780 aa5.08□□□□□ -1.6
BRCA1-217ENST00000487825 TMEM79Q9BSE2 394 aa5.08□□□□□ -1.6
BRCA1-217ENST00000487825 EDEM2Q9BV94 578 aa5.08□□□□□ -1.6
BRCA1-217ENST00000487825 API5Q9BZZ5 524 aaKnown RBP5.08□□□□□ -1.6
BRCA1-217ENST00000487825 CLMPQ9H6B4 373 aa5.08□□□□□ -1.6
BRCA1-217ENST00000487825 USP29Q9HBJ7 922 aa5.08□□□□□ -1.6
BRCA1-217ENST00000487825 TRIM36Q9NQ86 728 aa5.08□□□□□ -1.6
BRCA1-217ENST00000487825 PCDHGB6Q9Y5F9 930 aa5.08□□□□□ -1.6
BRCA1-217ENST00000487825 PCDHGA5Q9Y5G8 931 aa5.08□□□□□ -1.6
BRCA1-217ENST00000487825 ZFP37Q9Y6Q3 630 aaPredicted RBP5.08□□□□□ -1.6
BRCA1-217ENST00000487825 MYO16Q9Y6X6 1858 aa5.08□□□□□ -1.6
BRCA1-217ENST00000487825 COL5A1P20908 1838 aaPredicted RBP5.08□□□□□ -1.6
BRCA1-217ENST00000487825 MGAQ8IWI9 3026 aa5.07□□□□□ -1.6
BRCA1-217ENST00000487825 CEP192Q8TEP8 1941 aa5.07□□□□□ -1.6
BRCA1-217ENST00000487825 NBPF19A0A087WUL8 3843 aa5.07□□□□□ -1.6
BRCA1-217ENST00000487825 PTPRQQ9UMZ3 2332 aa5.07□□□□□ -1.6
BRCA1-217ENST00000487825 ABCB11O95342 1321 aa5.07□□□□□ -1.6
BRCA1-217ENST00000487825 DENND3A2RUS2 1198 aa5.07□□□□□ -1.6
BRCA1-217ENST00000487825 C4orf47A7E2U8 309 aa5.07□□□□□ -1.6
BRCA1-217ENST00000487825 KRTAP29-1A8MX34 341 aaPredicted RBP5.07□□□□□ -1.6
BRCA1-217ENST00000487825 SNX2O60749 519 aa5.07□□□□□ -1.6
BRCA1-217ENST00000487825 CNPP09543 421 aaKnown RBP5.07□□□□□ -1.6
BRCA1-217ENST00000487825 HSPD1P10809 573 aaKnown RBP5.07□□□□□ -1.6
BRCA1-217ENST00000487825 CD19P15391 556 aa5.07□□□□□ -1.6
BRCA1-217ENST00000487825 METAP2P50579 478 aaKnown RBP eCLIP5.07□□□□□ -1.6
BRCA1-217ENST00000487825 FAM193AP78312 1265 aa5.07□□□□□ -1.6
BRCA1-217ENST00000487825 CFHR3Q02985 330 aa5.07□□□□□ -1.6
BRCA1-217ENST00000487825 MFSD13AQ14CX5 517 aa5.07□□□□□ -1.6
BRCA1-217ENST00000487825 TCEAL6Q6IPX3 200 aa5.07□□□□□ -1.6
BRCA1-217ENST00000487825 VSTM1Q6UX27 236 aa5.07□□□□□ -1.6
BRCA1-217ENST00000487825 MTSS1LQ765P7 747 aa5.07□□□□□ -1.6
BRCA1-217ENST00000487825 BHLHA9Q7RTU4 235 aa5.07□□□□□ -1.6
BRCA1-217ENST00000487825 C14orf80Q86SX3 495 aa5.07□□□□□ -1.6
BRCA1-217ENST00000487825 AACSQ86V21 672 aa5.07□□□□□ -1.6
BRCA1-217ENST00000487825 LIX1LQ8IVB5 337 aa5.07□□□□□ -1.6
BRCA1-217ENST00000487825 ZNF843Q8N446 348 aa5.07□□□□□ -1.6
BRCA1-217ENST00000487825 IPCEF1Q8WWN9 437 aaPredicted RBP5.07□□□□□ -1.6
BRCA1-217ENST00000487825 TCEAL3Q969E4 200 aa5.07□□□□□ -1.6
BRCA1-217ENST00000487825 ZNF707Q96C28 371 aaPredicted RBP5.07□□□□□ -1.6
BRCA1-217ENST00000487825 STRBPQ96SI9 672 aaKnown RBP5.07□□□□□ -1.6
BRCA1-217ENST00000487825 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.07□□□□□ -1.6
BRCA1-217ENST00000487825 FAM49AQ9H0Q0 323 aaPredicted RBP5.07□□□□□ -1.6
BRCA1-217ENST00000487825 FAM83DQ9H4H8 585 aa5.07□□□□□ -1.6
BRCA1-217ENST00000487825 VPS45Q9NRW7 570 aa5.07□□□□□ -1.6
BRCA1-217ENST00000487825 TMEM184CQ9NVA4 438 aa5.07□□□□□ -1.6
BRCA1-217ENST00000487825 DNAJB11Q9UBS4 358 aa5.07□□□□□ -1.6
BRCA1-217ENST00000487825 SLC27A6Q9Y2P4 619 aa5.07□□□□□ -1.6
BRCA1-217ENST00000487825 UBR5O95071 2799 aaPredicted RBP5.07□□□□□ -1.6
BRCA1-217ENST00000487825 PTPRDP23468 1912 aa5.07□□□□□ -1.6
BRCA1-217ENST00000487825 ABCA7Q8IZY2 2146 aa5.06□□□□□ -1.6
BRCA1-217ENST00000487825 LNP1A1A4G5 178 aa5.06□□□□□ -1.6
BRCA1-217ENST00000487825 GOLGA6CA6NDK9 693 aa5.06□□□□□ -1.6
BRCA1-217ENST00000487825 GOLGA6BA6NDN3 693 aa5.06□□□□□ -1.6
BRCA1-217ENST00000487825 F8W8V4 182 aa5.06□□□□□ -1.6
BRCA1-217ENST00000487825 NMT2O60551 498 aa5.06□□□□□ -1.6
BRCA1-217ENST00000487825 RFPL2O75678 378 aa5.06□□□□□ -1.6
BRCA1-217ENST00000487825 INMTO95050 263 aa5.06□□□□□ -1.6
BRCA1-217ENST00000487825 MT-ND5P03915 603 aa5.06□□□□□ -1.6
BRCA1-217ENST00000487825 HRGP04196 525 aa5.06□□□□□ -1.6
BRCA1-217ENST00000487825 GOLGA6DP0CG33 693 aa5.06□□□□□ -1.6
BRCA1-217ENST00000487825 PDHBP11177 359 aa5.06□□□□□ -1.6
BRCA1-217ENST00000487825 KLRC2P26717 231 aa5.06□□□□□ -1.6
BRCA1-217ENST00000487825 CXCL12P48061 93 aa5.06□□□□□ -1.6
BRCA1-217ENST00000487825 ALDH7A1P49419 539 aaKnown RBP5.06□□□□□ -1.6
BRCA1-217ENST00000487825 YPEL5P62699 121 aa5.06□□□□□ -1.6
BRCA1-217ENST00000487825 SLC14A1Q13336 389 aa5.06□□□□□ -1.6
BRCA1-217ENST00000487825 NEDD9Q14511 834 aa5.06□□□□□ -1.6
BRCA1-217ENST00000487825 PGM5Q15124 567 aa5.06□□□□□ -1.6
BRCA1-217ENST00000487825 RBMS2Q15434 407 aaKnown RBP5.06□□□□□ -1.6
BRCA1-217ENST00000487825 CCDC184Q52MB2 194 aa5.06□□□□□ -1.6
BRCA1-217ENST00000487825 MANEALQ5VSG8 457 aa5.06□□□□□ -1.6
BRCA1-217ENST00000487825 MRPL10Q7Z7H8 261 aaKnown RBP5.06□□□□□ -1.6
BRCA1-217ENST00000487825 WDR5BQ86VZ2 330 aa5.06□□□□□ -1.6
BRCA1-217ENST00000487825 KRT73Q86Y46 540 aa5.06□□□□□ -1.6
BRCA1-217ENST00000487825 LSM14AQ8ND56 463 aaKnown RBP5.06□□□□□ -1.6
BRCA1-217ENST00000487825 C16orf52Q8NHV5 167 aa5.06□□□□□ -1.6
BRCA1-217ENST00000487825 PHKBQ93100 1093 aa5.06□□□□□ -1.6
BRCA1-217ENST00000487825 COQ8BQ96D53 544 aa5.06□□□□□ -1.6
BRCA1-217ENST00000487825 ZBTB10Q96DT7 871 aa5.06□□□□□ -1.6
BRCA1-217ENST00000487825 IGSF21Q96ID5 467 aa5.06□□□□□ -1.6
BRCA1-217ENST00000487825 VPS50Q96JG6 964 aa5.06□□□□□ -1.6
BRCA1-217ENST00000487825 ZNF668Q96K58 619 aaPredicted RBP5.06□□□□□ -1.6
BRCA1-217ENST00000487825 MRPL9Q9BYD2 267 aaKnown RBP5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms