RNA–Protein interactions for RNA: ENST00000487481.1

NME1-208, Transcript of NME/NM23 nucleoside diphosphate kinase 1, humanhuman

TSL 2

Gene NME1, Length 987 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME1-208ENST00000487481 DOPEY1Q5JWR5 2465 aa15.31■□□□□ 0.04
NME1-208ENST00000487481 TMEM202A6NGA9 273 aa15.3■□□□□ 0.04
NME1-208ENST00000487481 ZSCAN5CA6NGD5 496 aaPredicted RBP15.3■□□□□ 0.04
NME1-208ENST00000487481 VPS4BO75351 444 aa15.3■□□□□ 0.04
NME1-208ENST00000487481 TMCC1O94876 653 aa15.3■□□□□ 0.04
NME1-208ENST00000487481 THRAP10827 490 aa15.3■□□□□ 0.04
NME1-208ENST00000487481 MAP4P27816 1152 aaKnown RBP15.3■□□□□ 0.04
NME1-208ENST00000487481 CD1CP29017 333 aa15.3■□□□□ 0.04
NME1-208ENST00000487481 GPR3P46089 330 aa15.3■□□□□ 0.04
NME1-208ENST00000487481 UQCRFS1P47985 274 aa15.3■□□□□ 0.04
NME1-208ENST00000487481 STIM1Q13586 685 aa15.3■□□□□ 0.04
NME1-208ENST00000487481 ESPL1Q14674 2120 aa15.3■□□□□ 0.04
NME1-208ENST00000487481 TSR1Q2NL82 804 aaKnown RBP15.3■□□□□ 0.04
NME1-208ENST00000487481 DEFB109BQ30KR1 87 aa15.3■□□□□ 0.04
NME1-208ENST00000487481 CAPRIN2Q6IMN6 1127 aaKnown RBP15.3■□□□□ 0.04
NME1-208ENST00000487481 CCL4L1Q8NHW4 92 aa15.3■□□□□ 0.04
NME1-208ENST00000487481 FUBP1Q96AE4 644 aaKnown RBP15.3■□□□□ 0.04
NME1-208ENST00000487481 HMCESQ96FZ2 354 aa15.3■□□□□ 0.04
NME1-208ENST00000487481 DPYSL5Q9BPU6 564 aa15.3■□□□□ 0.04
NME1-208ENST00000487481 MAGEH1Q9H213 219 aa15.3■□□□□ 0.04
NME1-208ENST00000487481 MRPL40Q9NQ50 206 aaKnown RBP15.3■□□□□ 0.04
NME1-208ENST00000487481 NDFIP2Q9NV92 336 aa15.3■□□□□ 0.04
NME1-208ENST00000487481 VPS4AQ9UN37 437 aa15.3■□□□□ 0.04
NME1-208ENST00000487481 LRBAP50851 2863 aa15.29■□□□□ 0.04
NME1-208ENST00000487481 TSPAN11A1L157 253 aa15.29■□□□□ 0.04
NME1-208ENST00000487481 EFCAB7A8K855 629 aa15.29■□□□□ 0.04
NME1-208ENST00000487481 RAMP2O60895 175 aa15.29■□□□□ 0.04
NME1-208ENST00000487481 HOXC4P09017 264 aaPredicted RBP15.29■□□□□ 0.04
NME1-208ENST00000487481 SCNN1AP37088 669 aa15.29■□□□□ 0.04
NME1-208ENST00000487481 USP8P40818 1118 aa15.29■□□□□ 0.04
NME1-208ENST00000487481 ERAP2Q6P179 960 aa15.29■□□□□ 0.04
NME1-208ENST00000487481 LEKR1Q6ZMV7 388 aa15.29■□□□□ 0.04
NME1-208ENST00000487481 NLRP14Q86W24 1093 aa15.29■□□□□ 0.04
NME1-208ENST00000487481 FAM129CQ86XR2 697 aa15.29■□□□□ 0.04
NME1-208ENST00000487481 TRIM59Q8IWR1 403 aa15.29■□□□□ 0.04
NME1-208ENST00000487481 GALNT11Q8NCW6 608 aa15.29■□□□□ 0.04
NME1-208ENST00000487481 HCAR2Q8TDS4 363 aa15.29■□□□□ 0.04
NME1-208ENST00000487481 CASKIN2Q8WXE0 1202 aa15.29■□□□□ 0.04
NME1-208ENST00000487481 STARD8Q92502 1023 aa15.29■□□□□ 0.04
NME1-208ENST00000487481 PCDH12Q9NPG4 1184 aa15.29■□□□□ 0.04
NME1-208ENST00000487481 TMEM248Q9NWD8 314 aa15.29■□□□□ 0.04
NME1-208ENST00000487481 CUEDC1Q9NWM3 386 aaPredicted RBP15.29■□□□□ 0.04
NME1-208ENST00000487481 DAAM1Q9Y4D1 1078 aa15.29■□□□□ 0.04
NME1-208ENST00000487481 KCTD3Q9Y597 815 aa15.29■□□□□ 0.04
NME1-208ENST00000487481 CRYBG3Q68DQ2 2970 aa15.29■□□□□ 0.04
NME1-208ENST00000487481 MED13Q9UHV7 2174 aa15.28■□□□□ 0.04
NME1-208ENST00000487481 LOC101059948A0A1B0GTJ6 334 aa15.28■□□□□ 0.04
NME1-208ENST00000487481 MKRN2OSH3BPM6 223 aa15.28■□□□□ 0.04
NME1-208ENST00000487481 HSP90AA1P07900 732 aaKnown RBP15.28■□□□□ 0.04
NME1-208ENST00000487481 CCNB1P14635 433 aa15.28■□□□□ 0.04
NME1-208ENST00000487481 RHOQP17081 205 aa15.28■□□□□ 0.04
NME1-208ENST00000487481 MAN1A1P33908 653 aa15.28■□□□□ 0.04
NME1-208ENST00000487481 MMP12P39900 470 aa15.28■□□□□ 0.04
NME1-208ENST00000487481 STAT1P42224 750 aa15.28■□□□□ 0.04
NME1-208ENST00000487481 LIG3P49916 1009 aa15.28■□□□□ 0.04
NME1-208ENST00000487481 COPB1P53618 953 aaKnown RBP15.28■□□□□ 0.04
NME1-208ENST00000487481 RHOAP61586 193 aa15.28■□□□□ 0.04
NME1-208ENST00000487481 NRG1Q02297 640 aaPredicted RBP15.28■□□□□ 0.04
NME1-208ENST00000487481 ABHD18Q0P651 414 aa15.28■□□□□ 0.04
NME1-208ENST00000487481 BIRC2Q13490 618 aa15.28■□□□□ 0.04
NME1-208ENST00000487481 SQSTM1Q13501 440 aa15.28■□□□□ 0.04
NME1-208ENST00000487481 UGP2Q16851 508 aa15.28■□□□□ 0.04
NME1-208ENST00000487481 MANEALQ5VSG8 457 aa15.28■□□□□ 0.04
NME1-208ENST00000487481 ANKS6Q68DC2 871 aa15.28■□□□□ 0.04
NME1-208ENST00000487481 TCTN3Q6NUS6 607 aa15.28■□□□□ 0.04
NME1-208ENST00000487481 BNIPLQ7Z465 357 aa15.28■□□□□ 0.04
NME1-208ENST00000487481 HEATR4Q86WZ0 1026 aa15.28■□□□□ 0.04
NME1-208ENST00000487481 FAM131BQ86XD5 332 aa15.28■□□□□ 0.04
NME1-208ENST00000487481 NRSN1Q8IZ57 195 aa15.28■□□□□ 0.04
NME1-208ENST00000487481 PLA2G15Q8NCC3 412 aa15.28■□□□□ 0.04
NME1-208ENST00000487481 ZDHHC1Q8WTX9 485 aa15.28■□□□□ 0.04
NME1-208ENST00000487481 DHTKD1Q96HY7 919 aaPredicted RBP15.28■□□□□ 0.04
NME1-208ENST00000487481 NCAPGQ9BPX3 1015 aa15.28■□□□□ 0.04
NME1-208ENST00000487481 CYP4F12Q9HCS2 524 aa15.28■□□□□ 0.04
NME1-208ENST00000487481 PRDM8Q9NQV8 689 aa15.28■□□□□ 0.04
NME1-208ENST00000487481 SPATS2LQ9NUQ6 558 aaKnown RBP15.28■□□□□ 0.04
NME1-208ENST00000487481 DNAI1Q9UI46 699 aa15.28■□□□□ 0.04
NME1-208ENST00000487481 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.28■□□□□ 0.04
NME1-208ENST00000487481 CELSR2Q9HCU4 2923 aa15.28■□□□□ 0.04
NME1-208ENST00000487481 HIVEP3Q5T1R4 2406 aa15.27■□□□□ 0.04
NME1-208ENST00000487481 PRSS38A1L453 326 aa15.27■□□□□ 0.04
NME1-208ENST00000487481 BUB1O43683 1085 aa15.27■□□□□ 0.04
NME1-208ENST00000487481 KDELR3O43731 214 aa15.27■□□□□ 0.04
NME1-208ENST00000487481 SMC2O95347 1197 aa15.27■□□□□ 0.04
NME1-208ENST00000487481 TCN2P20062 427 aa15.27■□□□□ 0.04
NME1-208ENST00000487481 NR1D1P20393 614 aa15.27■□□□□ 0.04
NME1-208ENST00000487481 GNLYP22749 145 aa15.27■□□□□ 0.04
NME1-208ENST00000487481 CSF2RBP32927 897 aa15.27■□□□□ 0.04
NME1-208ENST00000487481 KRT9P35527 623 aa15.27■□□□□ 0.04
NME1-208ENST00000487481 PPP1R2P41236 205 aa15.27■□□□□ 0.04
NME1-208ENST00000487481 MARSP56192 900 aaKnown RBP15.27■□□□□ 0.04
NME1-208ENST00000487481 PTK2Q05397 1052 aa15.27■□□□□ 0.04
NME1-208ENST00000487481 GRM3Q14832 879 aa15.27■□□□□ 0.04
NME1-208ENST00000487481 INO80DQ53TQ3 878 aaPredicted RBP15.27■□□□□ 0.04
NME1-208ENST00000487481 FAM102AQ5T9C2 384 aaPredicted RBP15.27■□□□□ 0.04
NME1-208ENST00000487481 SMYD5Q6GMV2 418 aa15.27■□□□□ 0.04
NME1-208ENST00000487481 RWDD4Q6NW29 188 aaKnown RBP15.27■□□□□ 0.04
NME1-208ENST00000487481 TTI2Q6NXR4 508 aa15.27■□□□□ 0.04
NME1-208ENST00000487481 GJB7Q6PEY0 223 aa15.27■□□□□ 0.04
NME1-208ENST00000487481 EFCAB3Q8N7B9 438 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms