RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 CCNYL1Q8N7R7 359 aa26.24■■□□□ 1.79
HLA-C-208ENST00000487245 C2orf15Q8WU43 125 aaKnown RBP26.24■■□□□ 1.79
HLA-C-208ENST00000487245 IGSF8Q969P0 613 aa26.24■■□□□ 1.79
HLA-C-208ENST00000487245 POMKQ9H5K3 350 aa26.24■■□□□ 1.79
HLA-C-208ENST00000487245 PAPOLBQ9NRJ5 636 aaKnown RBP26.24■■□□□ 1.79
HLA-C-208ENST00000487245 MIA3Q5JRA6 1907 aa26.24■■□□□ 1.79
HLA-C-208ENST00000487245 TCAF2A6NFQ2 919 aa26.23■■□□□ 1.79
HLA-C-208ENST00000487245 H7C4K7 107 aa26.23■■□□□ 1.79
HLA-C-208ENST00000487245 DENRO43583 198 aaKnown RBP26.23■■□□□ 1.79
HLA-C-208ENST00000487245 BCAS2O75934 225 aaPredicted RBP26.23■■□□□ 1.79
HLA-C-208ENST00000487245 XRCC1P18887 633 aaPredicted RBP26.23■■□□□ 1.79
HLA-C-208ENST00000487245 PBX3P40426 434 aa26.23■■□□□ 1.79
HLA-C-208ENST00000487245 PSMD8P48556 350 aa26.23■■□□□ 1.79
HLA-C-208ENST00000487245 CEACAM7Q14002 265 aa26.23■■□□□ 1.79
HLA-C-208ENST00000487245 PDCD2Q16342 344 aaPredicted RBP26.23■■□□□ 1.79
HLA-C-208ENST00000487245 LRRC36Q1X8D7 754 aa26.23■■□□□ 1.79
HLA-C-208ENST00000487245 AGAP9Q5VTM2 703 aa26.23■■□□□ 1.79
HLA-C-208ENST00000487245 AFAP1L2Q8N4X5 818 aa26.23■■□□□ 1.79
HLA-C-208ENST00000487245 PSMG2Q969U7 264 aa26.23■■□□□ 1.79
HLA-C-208ENST00000487245 KLHL5Q96PQ7 755 aa26.23■■□□□ 1.79
HLA-C-208ENST00000487245 RETREG1Q9H6L5 497 aa26.23■■□□□ 1.79
HLA-C-208ENST00000487245 MRPL42Q9Y6G3 142 aaKnown RBP26.23■■□□□ 1.79
HLA-C-208ENST00000487245 SELPP16109 830 aa26.23■■□□□ 1.79
HLA-C-208ENST00000487245 DSC2Q02487 901 aa26.23■■□□□ 1.79
HLA-C-208ENST00000487245 SERINC3Q13530 473 aa26.23■■□□□ 1.79
HLA-C-208ENST00000487245 ADGRE1Q14246 886 aa26.23■■□□□ 1.79
HLA-C-208ENST00000487245 MMEL1Q495T6 779 aa26.23■■□□□ 1.79
HLA-C-208ENST00000487245 LRRC8DQ7L1W4 858 aa26.23■■□□□ 1.79
HLA-C-208ENST00000487245 MIB1Q86YT6 1006 aa26.23■■□□□ 1.79
HLA-C-208ENST00000487245 SPDYE1Q8NFV5 336 aaPredicted RBP26.23■■□□□ 1.79
HLA-C-208ENST00000487245 PPP1R36Q96LQ0 422 aa26.23■■□□□ 1.79
HLA-C-208ENST00000487245 RPRD1AQ96P16 312 aaPredicted RBP26.23■■□□□ 1.79
HLA-C-208ENST00000487245 CENPKQ9BS16 269 aa26.23■■□□□ 1.79
HLA-C-208ENST00000487245 MFSD1Q9H3U5 465 aa26.23■■□□□ 1.79
HLA-C-208ENST00000487245 PIDD1Q9HB75 910 aa26.23■■□□□ 1.79
HLA-C-208ENST00000487245 STARD7Q9NQZ5 370 aa26.23■■□□□ 1.79
HLA-C-208ENST00000487245 MTMR11A4FU01 709 aa26.22■■□□□ 1.79
HLA-C-208ENST00000487245 MROH6A6NGR9 719 aa26.22■■□□□ 1.79
HLA-C-208ENST00000487245 TBX18O95935 607 aa26.22■■□□□ 1.79
HLA-C-208ENST00000487245 RBP1P09455 135 aa26.22■■□□□ 1.79
HLA-C-208ENST00000487245 ROR2Q01974 943 aaKnown RBP26.22■■□□□ 1.79
HLA-C-208ENST00000487245 SULT2A1Q06520 285 aa26.22■■□□□ 1.79
HLA-C-208ENST00000487245 ART3Q13508 389 aa26.22■■□□□ 1.79
HLA-C-208ENST00000487245 BTG3Q14201 252 aaPredicted RBP26.22■■□□□ 1.79
HLA-C-208ENST00000487245 KLC3Q6P597 504 aa26.22■■□□□ 1.79
HLA-C-208ENST00000487245 CNSTQ6PJW8 725 aa26.22■■□□□ 1.79
HLA-C-208ENST00000487245 MFN1Q8IWA4 741 aa26.22■■□□□ 1.79
HLA-C-208ENST00000487245 MARVELD2Q8N4S9 558 aa26.22■■□□□ 1.79
HLA-C-208ENST00000487245 TTC9BQ8N6N2 239 aa26.22■■□□□ 1.79
HLA-C-208ENST00000487245 GPR62Q9BZJ7 368 aa26.22■■□□□ 1.79
HLA-C-208ENST00000487245 EML4Q9HC35 981 aaKnown RBP26.22■■□□□ 1.79
HLA-C-208ENST00000487245 G3BP2Q9UN86 482 aaKnown RBP26.22■■□□□ 1.79
HLA-C-208ENST00000487245 VWA8A3KMH1 1905 aa26.22■■□□□ 1.79
HLA-C-208ENST00000487245 LOC285095A0A1B0GVY8 99 aa26.21■■□□□ 1.79
HLA-C-208ENST00000487245 A0A1W2PQ45 241 aaPredicted RBP26.21■■□□□ 1.79
HLA-C-208ENST00000487245 A0A1W2PQY0 241 aa26.21■■□□□ 1.79
HLA-C-208ENST00000487245 ENPP3O14638 875 aa26.21■■□□□ 1.79
HLA-C-208ENST00000487245 LTA4HP09960 611 aaKnown RBP26.21■■□□□ 1.79
HLA-C-208ENST00000487245 ARPP19P56211 112 aa26.21■■□□□ 1.79
HLA-C-208ENST00000487245 MAXP61244 160 aa26.21■■□□□ 1.79
HLA-C-208ENST00000487245 MGAT5BQ3V5L5 792 aa26.21■■□□□ 1.79
HLA-C-208ENST00000487245 LIN52Q52LA3 116 aa26.21■■□□□ 1.79
HLA-C-208ENST00000487245 RASIP1Q5U651 963 aa26.21■■□□□ 1.79
HLA-C-208ENST00000487245 TICAM1Q8IUC6 712 aa26.21■■□□□ 1.79
HLA-C-208ENST00000487245 ADCY4Q8NFM4 1077 aa26.21■■□□□ 1.79
HLA-C-208ENST00000487245 ARRDC2Q8TBH0 407 aa26.21■■□□□ 1.79
HLA-C-208ENST00000487245 GPR152Q8TDT2 470 aa26.21■■□□□ 1.79
HLA-C-208ENST00000487245 PEX13Q92968 403 aa26.21■■□□□ 1.79
HLA-C-208ENST00000487245 CDK5RAP1Q96SZ6 601 aaKnown RBP26.21■■□□□ 1.79
HLA-C-208ENST00000487245 MEAF6Q9HAF1 191 aa26.21■■□□□ 1.79
HLA-C-208ENST00000487245 MRPL40Q9NQ50 206 aaKnown RBP26.21■■□□□ 1.79
HLA-C-208ENST00000487245 RIMS3Q9UJD0 308 aa26.21■■□□□ 1.79
HLA-C-208ENST00000487245 WISP3O95389 354 aaPredicted RBP26.21■■□□□ 1.79
HLA-C-208ENST00000487245 PENKP01210 267 aaPredicted RBP26.21■■□□□ 1.79
HLA-C-208ENST00000487245 SLC26A3P40879 764 aa26.21■■□□□ 1.79
HLA-C-208ENST00000487245 INHBCP55103 352 aa26.21■■□□□ 1.79
HLA-C-208ENST00000487245 PDK3Q15120 406 aa26.21■■□□□ 1.79
HLA-C-208ENST00000487245 MAPRE2Q15555 327 aa26.21■■□□□ 1.79
HLA-C-208ENST00000487245 GRAMD1BQ3KR37 738 aa26.21■■□□□ 1.79
HLA-C-208ENST00000487245 RARS2Q5T160 578 aaKnown RBP26.21■■□□□ 1.79
HLA-C-208ENST00000487245 RBM20Q5T481 1227 aaKnown RBP26.21■■□□□ 1.79
HLA-C-208ENST00000487245 UGT2A3Q6UWM9 527 aa26.21■■□□□ 1.79
HLA-C-208ENST00000487245 ZNF599Q96NL3 588 aa26.21■■□□□ 1.79
HLA-C-208ENST00000487245 CASD1Q96PB1 797 aa26.21■■□□□ 1.79
HLA-C-208ENST00000487245 HACD3Q9P035 362 aa26.21■■□□□ 1.79
HLA-C-208ENST00000487245 RAB26Q9ULW5 256 aa26.21■■□□□ 1.79
HLA-C-208ENST00000487245 PRSS51A0A1B0GVH4 220 aa26.2■■□□□ 1.78
HLA-C-208ENST00000487245 ARVCFO00192 962 aa26.2■■□□□ 1.78
HLA-C-208ENST00000487245 ZDHHC11BP0C7U3 371 aa26.2■■□□□ 1.78
HLA-C-208ENST00000487245 DPP6P42658 865 aa26.2■■□□□ 1.78
HLA-C-208ENST00000487245 FOLH1Q04609 750 aa26.2■■□□□ 1.78
HLA-C-208ENST00000487245 SQLEQ14534 574 aa26.2■■□□□ 1.78
HLA-C-208ENST00000487245 SIRPB2Q5JXA9 342 aa26.2■■□□□ 1.78
HLA-C-208ENST00000487245 CWF19L1Q69YN2 538 aaKnown RBP26.2■■□□□ 1.78
HLA-C-208ENST00000487245 SLC22A9Q8IVM8 553 aa26.2■■□□□ 1.78
HLA-C-208ENST00000487245 OR13J1Q8NGT2 312 aa26.2■■□□□ 1.78
HLA-C-208ENST00000487245 PXYLP1Q8TE99 480 aa26.2■■□□□ 1.78
HLA-C-208ENST00000487245 NCSTNQ92542 709 aa26.2■■□□□ 1.78
HLA-C-208ENST00000487245 DCUN1D1Q96GG9 259 aa26.2■■□□□ 1.78
HLA-C-208ENST00000487245 UBXN10Q96LJ8 280 aa26.2■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms