RNA–Protein interactions for RNA: ENST00000487244.5

UBE4B-209, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best)

Gene UBE4B, Length 818 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-209ENST00000487244 SPA17Q15506 151 aa7.22□□□□□ -1.25
UBE4B-209ENST00000487244 ZNF423Q2M1K9 1284 aa7.22□□□□□ -1.25
UBE4B-209ENST00000487244 KIAA1161Q6NSJ0 714 aa7.22□□□□□ -1.25
UBE4B-209ENST00000487244 NEK5Q6P3R8 708 aa7.22□□□□□ -1.25
UBE4B-209ENST00000487244 IL27RAQ6UWB1 636 aa7.22□□□□□ -1.25
UBE4B-209ENST00000487244 MFSD7Q6UXD7 560 aa7.22□□□□□ -1.25
UBE4B-209ENST00000487244 NPNTQ6UXI9 565 aa7.22□□□□□ -1.25
UBE4B-209ENST00000487244 TTC7BQ86TV6 843 aa7.22□□□□□ -1.25
UBE4B-209ENST00000487244 GATAD2AQ86YP4 633 aa7.22□□□□□ -1.25
UBE4B-209ENST00000487244 SLC22A18ASQ8N1D0 253 aa7.22□□□□□ -1.25
UBE4B-209ENST00000487244 DEPDC4Q8N2C3 294 aa7.22□□□□□ -1.25
UBE4B-209ENST00000487244 VWA5B2Q8N398 1253 aa7.22□□□□□ -1.25
UBE4B-209ENST00000487244 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.22□□□□□ -1.25
UBE4B-209ENST00000487244 MFSD2AQ8NA29 543 aa7.22□□□□□ -1.25
UBE4B-209ENST00000487244 OR13H1Q8NG92 308 aa7.22□□□□□ -1.25
UBE4B-209ENST00000487244 KRT35Q92764 455 aa7.22□□□□□ -1.25
UBE4B-209ENST00000487244 RNF157Q96PX1 679 aa7.22□□□□□ -1.25
UBE4B-209ENST00000487244 SMIM14Q96QK8 99 aa7.22□□□□□ -1.25
UBE4B-209ENST00000487244 PSKH2Q96QS6 385 aa7.22□□□□□ -1.25
UBE4B-209ENST00000487244 TUBGCP5Q96RT8 1024 aa7.22□□□□□ -1.25
UBE4B-209ENST00000487244 KLF6Q99612 283 aaPredicted RBP7.22□□□□□ -1.25
UBE4B-209ENST00000487244 MGME1Q9BQP7 344 aa7.22□□□□□ -1.25
UBE4B-209ENST00000487244 SLC17A9Q9BYT1 436 aa7.22□□□□□ -1.25
UBE4B-209ENST00000487244 SUV39H2Q9H5I1 410 aa7.22□□□□□ -1.25
UBE4B-209ENST00000487244 NOD2Q9HC29 1040 aa7.22□□□□□ -1.25
UBE4B-209ENST00000487244 NT5MQ9NPB1 228 aa7.22□□□□□ -1.25
UBE4B-209ENST00000487244 PCDH12Q9NPG4 1184 aa7.22□□□□□ -1.25
UBE4B-209ENST00000487244 DTLQ9NZJ0 730 aa7.22□□□□□ -1.25
UBE4B-209ENST00000487244 DKK3Q9UBP4 350 aa7.22□□□□□ -1.25
UBE4B-209ENST00000487244 TRIM10Q9UDY6 481 aa7.22□□□□□ -1.25
UBE4B-209ENST00000487244 SEPT3Q9UH03 358 aa7.22□□□□□ -1.25
UBE4B-209ENST00000487244 LCMT1Q9UIC8 334 aa7.22□□□□□ -1.25
UBE4B-209ENST00000487244 DMTF1Q9Y222 760 aa7.22□□□□□ -1.25
UBE4B-209ENST00000487244 COQ6Q9Y2Z9 468 aa7.22□□□□□ -1.25
UBE4B-209ENST00000487244 EPN1Q9Y6I3 576 aaPredicted RBP7.22□□□□□ -1.25
UBE4B-209ENST00000487244 EPG5Q9HCE0 2579 aa7.21□□□□□ -1.25
UBE4B-209ENST00000487244 A0A0U1RQS6 177 aa7.21□□□□□ -1.26
UBE4B-209ENST00000487244 A0A1B0GTQ1 180 aa7.21□□□□□ -1.26
UBE4B-209ENST00000487244 A8MX80 341 aa7.21□□□□□ -1.26
UBE4B-209ENST00000487244 TRAFD1O14545 582 aaPredicted RBP7.21□□□□□ -1.26
UBE4B-209ENST00000487244 TSPAN6O43657 245 aa7.21□□□□□ -1.26
UBE4B-209ENST00000487244 SDC3O75056 442 aa7.21□□□□□ -1.26
UBE4B-209ENST00000487244 CBFA2T3O75081 653 aa7.21□□□□□ -1.26
UBE4B-209ENST00000487244 HLA-DQB2P05538 268 aa7.21□□□□□ -1.26
UBE4B-209ENST00000487244 ADRB1P08588 477 aa7.21□□□□□ -1.26
UBE4B-209ENST00000487244 ZNF883P0CG24 379 aa7.21□□□□□ -1.26
UBE4B-209ENST00000487244 THEGLP0DJG4 465 aa7.21□□□□□ -1.26
UBE4B-209ENST00000487244 KRT10P13645 584 aa7.21□□□□□ -1.26
UBE4B-209ENST00000487244 CEACAM1P13688 526 aa7.21□□□□□ -1.26
UBE4B-209ENST00000487244 PECAM1P16284 738 aaPredicted RBP7.21□□□□□ -1.26
UBE4B-209ENST00000487244 SERPINA4P29622 427 aa7.21□□□□□ -1.26
UBE4B-209ENST00000487244 AKT2P31751 481 aa7.21□□□□□ -1.26
UBE4B-209ENST00000487244 IGFALSP35858 605 aa7.21□□□□□ -1.26
UBE4B-209ENST00000487244 MMP12P39900 470 aa7.21□□□□□ -1.26
UBE4B-209ENST00000487244 CDKN2BP42772 138 aa7.21□□□□□ -1.26
UBE4B-209ENST00000487244 MMP13P45452 471 aa7.21□□□□□ -1.26
UBE4B-209ENST00000487244 CSNK1DP48730 415 aa7.21□□□□□ -1.26
UBE4B-209ENST00000487244 CCT8P50990 548 aa7.21□□□□□ -1.26
UBE4B-209ENST00000487244 AP1S1P61966 158 aa7.21□□□□□ -1.26
UBE4B-209ENST00000487244 DYNLT1P63172 113 aa7.21□□□□□ -1.26
UBE4B-209ENST00000487244 DSC2Q02487 901 aa7.21□□□□□ -1.26
UBE4B-209ENST00000487244 RAD51Q06609 339 aa7.21□□□□□ -1.26
UBE4B-209ENST00000487244 CCDC15Q0P6D6 951 aa7.21□□□□□ -1.26
UBE4B-209ENST00000487244 TRAF2Q12933 501 aa7.21□□□□□ -1.26
UBE4B-209ENST00000487244 RALGDSQ12967 914 aa7.21□□□□□ -1.26
UBE4B-209ENST00000487244 ZBTB17Q13105 803 aa7.21□□□□□ -1.26
UBE4B-209ENST00000487244 SLC14A1Q13336 389 aa7.21□□□□□ -1.26
UBE4B-209ENST00000487244 RFTN1Q14699 578 aaPredicted RBP7.21□□□□□ -1.26
UBE4B-209ENST00000487244 STAT4Q14765 748 aa7.21□□□□□ -1.26
UBE4B-209ENST00000487244 UGP2Q16851 508 aa7.21□□□□□ -1.26
UBE4B-209ENST00000487244 MARC1Q5VT66 337 aa7.21□□□□□ -1.26
UBE4B-209ENST00000487244 LRRC38Q5VT99 294 aa7.21□□□□□ -1.26
UBE4B-209ENST00000487244 SLC9A4Q6AI14 798 aa7.21□□□□□ -1.26
UBE4B-209ENST00000487244 C11orf63Q6NUN7 778 aa7.21□□□□□ -1.26
UBE4B-209ENST00000487244 RIPOR1Q6ZS17 1223 aa7.21□□□□□ -1.26
UBE4B-209ENST00000487244 PTAR1Q7Z6K3 402 aaPredicted RBP7.21□□□□□ -1.26
UBE4B-209ENST00000487244 ABI3BPQ7Z7G0 1075 aa7.21□□□□□ -1.26
UBE4B-209ENST00000487244 TMTC1Q8IUR5 882 aa7.21□□□□□ -1.26
UBE4B-209ENST00000487244 MAP7D3Q8IWC1 876 aa7.21□□□□□ -1.26
UBE4B-209ENST00000487244 RHOT1Q8IXI2 618 aa7.21□□□□□ -1.26
UBE4B-209ENST00000487244 TEX26Q8N6G2 289 aa7.21□□□□□ -1.26
UBE4B-209ENST00000487244 TPCN2Q8NHX9 752 aa7.21□□□□□ -1.26
UBE4B-209ENST00000487244 SETD7Q8WTS6 366 aaKnown RBP7.21□□□□□ -1.26
UBE4B-209ENST00000487244 NANOS1Q8WY41 292 aaKnown RBP7.21□□□□□ -1.26
UBE4B-209ENST00000487244 MAML1Q92585 1016 aa7.21□□□□□ -1.26
UBE4B-209ENST00000487244 GLMNQ92990 594 aa7.21□□□□□ -1.26
UBE4B-209ENST00000487244 RAB7BQ96AH8 199 aa7.21□□□□□ -1.26
UBE4B-209ENST00000487244 ECHDC3Q96DC8 303 aa7.21□□□□□ -1.26
UBE4B-209ENST00000487244 FEM1CQ96JP0 617 aa7.21□□□□□ -1.26
UBE4B-209ENST00000487244 CALR3Q96L12 384 aaKnown RBP7.21□□□□□ -1.26
UBE4B-209ENST00000487244 BMFQ96LC9 184 aa7.21□□□□□ -1.26
UBE4B-209ENST00000487244 ZNF641Q96N77 438 aaPredicted RBP7.21□□□□□ -1.26
UBE4B-209ENST00000487244 ZNF599Q96NL3 588 aa7.21□□□□□ -1.26
UBE4B-209ENST00000487244 NUDCD1Q96RS6 583 aa7.21□□□□□ -1.26
UBE4B-209ENST00000487244 LGMNQ99538 433 aa7.21□□□□□ -1.26
UBE4B-209ENST00000487244 ELF4Q99607 663 aaPredicted RBP7.21□□□□□ -1.26
UBE4B-209ENST00000487244 BAG1Q99933 345 aaPredicted RBP7.21□□□□□ -1.26
UBE4B-209ENST00000487244 HERPUD2Q9BSE4 406 aa7.21□□□□□ -1.26
UBE4B-209ENST00000487244 CEP41Q9BYV8 373 aa7.21□□□□□ -1.26
UBE4B-209ENST00000487244 ATP13A3Q9H7F0 1226 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms