RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 OAZ1P54368 228 aa12.44□□□□□ -0.42
HSPG2-211ENST00000486901 SH3BGRP55822 239 aaPredicted RBP12.44□□□□□ -0.42
HSPG2-211ENST00000486901 STX1BP61266 288 aa12.44□□□□□ -0.42
HSPG2-211ENST00000486901 IL1RL1Q01638 556 aa12.44□□□□□ -0.42
HSPG2-211ENST00000486901 TNK2Q07912 1038 aa12.44□□□□□ -0.42
HSPG2-211ENST00000486901 GPR162Q16538 588 aa12.44□□□□□ -0.42
HSPG2-211ENST00000486901 PFKFB4Q16877 469 aa12.44□□□□□ -0.42
HSPG2-211ENST00000486901 KIAA0319Q5VV43 1072 aa12.44□□□□□ -0.42
HSPG2-211ENST00000486901 EGFLAMQ63HQ2 1017 aa12.44□□□□□ -0.42
HSPG2-211ENST00000486901 TBPL2Q6SJ96 375 aa12.44□□□□□ -0.42
HSPG2-211ENST00000486901 LYSMD3Q7Z3D4 306 aa12.44□□□□□ -0.42
HSPG2-211ENST00000486901 HS3ST5Q8IZT8 346 aa12.44□□□□□ -0.42
HSPG2-211ENST00000486901 BEST2Q8NFU1 509 aa12.44□□□□□ -0.42
HSPG2-211ENST00000486901 TRPC4APQ8TEL6 797 aa12.44□□□□□ -0.42
HSPG2-211ENST00000486901 HDAC10Q969S8 669 aa12.44□□□□□ -0.42
HSPG2-211ENST00000486901 RNF145Q96MT1 663 aa12.44□□□□□ -0.42
HSPG2-211ENST00000486901 EFHD1Q9BUP0 239 aa12.44□□□□□ -0.42
HSPG2-211ENST00000486901 PLGRKTQ9HBL7 147 aa12.44□□□□□ -0.42
HSPG2-211ENST00000486901 MID1IP1Q9NPA3 183 aa12.44□□□□□ -0.42
HSPG2-211ENST00000486901 SEMA4BQ9NPR2 832 aaPredicted RBP12.44□□□□□ -0.42
HSPG2-211ENST00000486901 COL2A1P02458 1487 aaPredicted RBP12.43□□□□□ -0.42
HSPG2-211ENST00000486901 A0A0U1RQS6 177 aa12.43□□□□□ -0.42
HSPG2-211ENST00000486901 XYLBO75191 536 aa12.43□□□□□ -0.42
HSPG2-211ENST00000486901 IL7RP16871 459 aa12.43□□□□□ -0.42
HSPG2-211ENST00000486901 CAPN3P20807 821 aa12.43□□□□□ -0.42
HSPG2-211ENST00000486901 MATN1P21941 496 aa12.43□□□□□ -0.42
HSPG2-211ENST00000486901 HSPA13P48723 471 aa12.43□□□□□ -0.42
HSPG2-211ENST00000486901 MERTKQ12866 999 aa12.43□□□□□ -0.42
HSPG2-211ENST00000486901 LAPTM5Q13571 262 aa12.43□□□□□ -0.42
HSPG2-211ENST00000486901 DPYSQ14117 519 aa12.43□□□□□ -0.42
HSPG2-211ENST00000486901 PYCR3Q53H96 274 aa12.43□□□□□ -0.42
HSPG2-211ENST00000486901 SLC15A4Q8N697 577 aa12.43□□□□□ -0.42
HSPG2-211ENST00000486901 NLGN2Q8NFZ4 835 aa12.43□□□□□ -0.42
HSPG2-211ENST00000486901 PABPC5Q96DU9 382 aaKnown RBP12.43□□□□□ -0.42
HSPG2-211ENST00000486901 CYP2S1Q96SQ9 504 aa12.43□□□□□ -0.42
HSPG2-211ENST00000486901 MPHOSPH6Q99547 160 aaKnown RBP12.43□□□□□ -0.42
HSPG2-211ENST00000486901 ZNF385DQ9H6B1 395 aa12.43□□□□□ -0.42
HSPG2-211ENST00000486901 AKTIPQ9H8T0 292 aa12.43□□□□□ -0.42
HSPG2-211ENST00000486901 FANCEQ9HB96 536 aa12.43□□□□□ -0.42
HSPG2-211ENST00000486901 UTP6Q9NYH9 597 aaKnown RBP12.43□□□□□ -0.42
HSPG2-211ENST00000486901 KIAA1257Q9ULG3 409 aa12.43□□□□□ -0.42
HSPG2-211ENST00000486901 STAP1Q9ULZ2 295 aa12.43□□□□□ -0.42
HSPG2-211ENST00000486901 SLC27A5Q9Y2P5 690 aa12.43□□□□□ -0.42
HSPG2-211ENST00000486901 COQ6Q9Y2Z9 468 aa12.43□□□□□ -0.42
HSPG2-211ENST00000486901 NUP214P35658 2090 aaPredicted RBP12.43□□□□□ -0.42
HSPG2-211ENST00000486901 ONECUT3O60422 494 aaPredicted RBP12.43□□□□□ -0.42
HSPG2-211ENST00000486901 SLC7A1P30825 629 aa12.43□□□□□ -0.42
HSPG2-211ENST00000486901 NOS2P35228 1153 aa12.43□□□□□ -0.42
HSPG2-211ENST00000486901 MAGEA12P43365 314 aa12.43□□□□□ -0.42
HSPG2-211ENST00000486901 BMXP51813 675 aa12.43□□□□□ -0.42
HSPG2-211ENST00000486901 NR1D2Q14995 579 aa12.43□□□□□ -0.42
HSPG2-211ENST00000486901 TGFBIQ15582 683 aa12.43□□□□□ -0.42
HSPG2-211ENST00000486901 TCF12Q99081 682 aa12.43□□□□□ -0.42
HSPG2-211ENST00000486901 IL22Q9GZX6 179 aa12.43□□□□□ -0.42
HSPG2-211ENST00000486901 GBA3Q9H227 469 aa12.43□□□□□ -0.42
HSPG2-211ENST00000486901 RPF2Q9H7B2 306 aaKnown RBP12.43□□□□□ -0.42
HSPG2-211ENST00000486901 POLE4Q9NR33 117 aa12.43□□□□□ -0.42
HSPG2-211ENST00000486901 TBC1D23Q9NUY8 699 aa12.43□□□□□ -0.42
HSPG2-211ENST00000486901 ADAM28Q9UKQ2 775 aa12.43□□□□□ -0.42
HSPG2-211ENST00000486901 GOLGA8CPA6NN73 597 aa12.43□□□□□ -0.42
HSPG2-211ENST00000486901 C19orf81C9J6K1 198 aa12.43□□□□□ -0.42
HSPG2-211ENST00000486901 DLGAP1O14490 977 aa12.43□□□□□ -0.42
HSPG2-211ENST00000486901 ANGPT2O15123 496 aa12.43□□□□□ -0.42
HSPG2-211ENST00000486901 HOXA11P31270 313 aaPredicted RBP12.43□□□□□ -0.42
HSPG2-211ENST00000486901 ALDH3B2P48448 385 aa12.43□□□□□ -0.42
HSPG2-211ENST00000486901 TXNL4AP83876 142 aaKnown RBP12.43□□□□□ -0.42
HSPG2-211ENST00000486901 POLD3Q15054 466 aaPredicted RBP12.43□□□□□ -0.42
HSPG2-211ENST00000486901 DNAJC14Q6Y2X3 702 aaPredicted RBP12.43□□□□□ -0.42
HSPG2-211ENST00000486901 CYS1Q717R9 158 aa12.43□□□□□ -0.42
HSPG2-211ENST00000486901 CENPSQ8N2Z9 138 aa12.43□□□□□ -0.42
HSPG2-211ENST00000486901 OR2T34Q8NGX1 318 aa12.43□□□□□ -0.42
HSPG2-211ENST00000486901 OR2T3Q8NH03 318 aa12.43□□□□□ -0.42
HSPG2-211ENST00000486901 TFAP2CQ92754 450 aa12.43□□□□□ -0.42
HSPG2-211ENST00000486901 PLEKHA8Q96JA3 519 aa12.43□□□□□ -0.42
HSPG2-211ENST00000486901 TEX37Q96LM6 180 aa12.43□□□□□ -0.42
HSPG2-211ENST00000486901 RBM22Q9NW64 420 aaKnown RBP eCLIP12.43□□□□□ -0.42
HSPG2-211ENST00000486901 PAIP2BQ9ULR5 123 aaKnown RBP12.43□□□□□ -0.42
HSPG2-211ENST00000486901 USP34Q70CQ2 3546 aa12.42□□□□□ -0.42
HSPG2-211ENST00000486901 SMIM28A0A1B0GU29 152 aa12.42□□□□□ -0.42
HSPG2-211ENST00000486901 TRPC5OSA6NMA1 111 aa12.42□□□□□ -0.42
HSPG2-211ENST00000486901 H3BRB1 525 aa12.42□□□□□ -0.42
HSPG2-211ENST00000486901 PIP5K1BO14986 540 aa12.42□□□□□ -0.42
HSPG2-211ENST00000486901 MLLT10P55197 1068 aa12.42□□□□□ -0.42
HSPG2-211ENST00000486901 TPD52P55327 224 aaPredicted RBP12.42□□□□□ -0.42
HSPG2-211ENST00000486901 NEPROQ6NW34 567 aa12.42□□□□□ -0.42
HSPG2-211ENST00000486901 CLEC20AQ6ZU45 233 aa12.42□□□□□ -0.42
HSPG2-211ENST00000486901 STRADAQ7RTN6 431 aa12.42□□□□□ -0.42
HSPG2-211ENST00000486901 RBM12BQ8IXT5 1001 aaKnown RBP12.42□□□□□ -0.42
HSPG2-211ENST00000486901 BBS5Q8N3I7 341 aa12.42□□□□□ -0.42
HSPG2-211ENST00000486901 ACOX2Q99424 681 aa12.42□□□□□ -0.42
HSPG2-211ENST00000486901 A0A087WXM4 84 aa12.42□□□□□ -0.42
HSPG2-211ENST00000486901 SH3PXD2BA1X283 911 aa12.42□□□□□ -0.42
HSPG2-211ENST00000486901 UBXN8O00124 270 aa12.42□□□□□ -0.42
HSPG2-211ENST00000486901 RSL1D1O76021 490 aaKnown RBP12.42□□□□□ -0.42
HSPG2-211ENST00000486901 CD151P48509 253 aa12.42□□□□□ -0.42
HSPG2-211ENST00000486901 CPSF7Q8N684 471 aaKnown RBP12.42□□□□□ -0.42
HSPG2-211ENST00000486901 SCAMP5Q8TAC9 235 aa12.42□□□□□ -0.42
HSPG2-211ENST00000486901 NPY6RQ99463 290 aa12.42□□□□□ -0.42
HSPG2-211ENST00000486901 TBL1YQ9BQ87 522 aa12.42□□□□□ -0.42
HSPG2-211ENST00000486901 YIPF2Q9BWQ6 316 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms