RNA–Protein interactions for RNA: ENST00000486519.5

U2AF1-211, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 3

Gene U2AF1, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-211ENST00000486519 HOXB4P17483 251 aaPredicted RBP15.28■□□□□ 0.04
U2AF1-211ENST00000486519 PSMC2P35998 433 aaKnown RBP15.28■□□□□ 0.04
U2AF1-211ENST00000486519 ACVRL1P37023 503 aa15.28■□□□□ 0.04
U2AF1-211ENST00000486519 SETD3Q86TU7 594 aaPredicted RBP15.28■□□□□ 0.04
U2AF1-211ENST00000486519 LURAP1Q96LR2 239 aa15.28■□□□□ 0.04
U2AF1-211ENST00000486519 SLC2A13Q96QE2 648 aa15.28■□□□□ 0.04
U2AF1-211ENST00000486519 TEFMQ96QE5 360 aaKnown RBP15.28■□□□□ 0.04
U2AF1-211ENST00000486519 ATP13A1Q9HD20 1204 aa15.28■□□□□ 0.04
U2AF1-211ENST00000486519 DRGXA6NNA5 263 aa15.27■□□□□ 0.04
U2AF1-211ENST00000486519 SLC2A3P11169 496 aa15.27■□□□□ 0.04
U2AF1-211ENST00000486519 ENPEPQ07075 957 aa15.27■□□□□ 0.04
U2AF1-211ENST00000486519 STK38Q15208 465 aa15.27■□□□□ 0.04
U2AF1-211ENST00000486519 TESK1Q15569 626 aa15.27■□□□□ 0.04
U2AF1-211ENST00000486519 NFIL3Q16649 462 aa15.27■□□□□ 0.04
U2AF1-211ENST00000486519 CLPPQ16740 277 aaPredicted RBP15.27■□□□□ 0.04
U2AF1-211ENST00000486519 ZXDCQ2QGD7 858 aaPredicted RBP15.27■□□□□ 0.04
U2AF1-211ENST00000486519 TMEM52BQ4KMG9 183 aa15.27■□□□□ 0.04
U2AF1-211ENST00000486519 SLC6A19Q695T7 634 aa15.27■□□□□ 0.04
U2AF1-211ENST00000486519 TMEM71Q6P5X7 295 aa15.27■□□□□ 0.04
U2AF1-211ENST00000486519 CEACAM20Q6UY09 585 aa15.27■□□□□ 0.04
U2AF1-211ENST00000486519 MMP21Q8N119 569 aa15.27■□□□□ 0.04
U2AF1-211ENST00000486519 NAGSQ8N159 534 aa15.27■□□□□ 0.04
U2AF1-211ENST00000486519 SLC25A23Q9BV35 468 aa15.27■□□□□ 0.04
U2AF1-211ENST00000486519 SLC29A3Q9BZD2 475 aa15.27■□□□□ 0.04
U2AF1-211ENST00000486519 TWSG1Q9GZX9 223 aa15.27■□□□□ 0.04
U2AF1-211ENST00000486519 PIGVQ9NUD9 493 aa15.27■□□□□ 0.04
U2AF1-211ENST00000486519 ASF1BQ9NVP2 202 aa15.27■□□□□ 0.04
U2AF1-211ENST00000486519 TAAR2Q9P1P5 351 aa15.27■□□□□ 0.04
U2AF1-211ENST00000486519 PDP2Q9P2J9 529 aa15.27■□□□□ 0.04
U2AF1-211ENST00000486519 SERTAD1Q9UHV2 236 aa15.27■□□□□ 0.04
U2AF1-211ENST00000486519 MOSPD1Q9UJG1 213 aa15.27■□□□□ 0.04
U2AF1-211ENST00000486519 COQ4Q9Y3A0 265 aa15.27■□□□□ 0.04
U2AF1-211ENST00000486519 PCDHB3Q9Y5E6 796 aa15.27■□□□□ 0.04
U2AF1-211ENST00000486519 SART1O43290 800 aaKnown RBP15.26■□□□□ 0.03
U2AF1-211ENST00000486519 OR1E1P30953 314 aa15.26■□□□□ 0.03
U2AF1-211ENST00000486519 HNRNPH3P31942 346 aaKnown RBP15.26■□□□□ 0.03
U2AF1-211ENST00000486519 CDK17Q00537 523 aa15.26■□□□□ 0.03
U2AF1-211ENST00000486519 ADAM9Q13443 819 aa15.26■□□□□ 0.03
U2AF1-211ENST00000486519 SQSTM1Q13501 440 aa15.26■□□□□ 0.03
U2AF1-211ENST00000486519 MYLK3Q32MK0 819 aa15.26■□□□□ 0.03
U2AF1-211ENST00000486519 RETSATQ6NUM9 610 aa15.26■□□□□ 0.03
U2AF1-211ENST00000486519 ARHGAP22Q7Z5H3 698 aa15.26■□□□□ 0.03
U2AF1-211ENST00000486519 ESX1Q8N693 406 aa15.26■□□□□ 0.03
U2AF1-211ENST00000486519 RBMXL3Q8N7X1 1067 aaKnown RBP15.26■□□□□ 0.03
U2AF1-211ENST00000486519 GALNT6Q8NCL4 622 aa15.26■□□□□ 0.03
U2AF1-211ENST00000486519 KIAA1524Q8TCG1 905 aa15.26■□□□□ 0.03
U2AF1-211ENST00000486519 SNRNP40Q96DI7 357 aaKnown RBP15.26■□□□□ 0.03
U2AF1-211ENST00000486519 ARHGEF26Q96DR7 871 aa15.26■□□□□ 0.03
U2AF1-211ENST00000486519 MAGEF1Q9HAY2 307 aa15.26■□□□□ 0.03
U2AF1-211ENST00000486519 MDC1Q14676 2089 aaKnown RBP15.25■□□□□ 0.03
U2AF1-211ENST00000486519 INSIG1O15503 277 aa15.25■□□□□ 0.03
U2AF1-211ENST00000486519 MAP3K6O95382 1288 aa15.25■□□□□ 0.03
U2AF1-211ENST00000486519 CCNB1P14635 433 aa15.25■□□□□ 0.03
U2AF1-211ENST00000486519 GPR3P46089 330 aa15.25■□□□□ 0.03
U2AF1-211ENST00000486519 LEPRP48357 1165 aaKnown RBP15.25■□□□□ 0.03
U2AF1-211ENST00000486519 KIAA1024LP59773 190 aa15.25■□□□□ 0.03
U2AF1-211ENST00000486519 YWHAEP62258 255 aaKnown RBP15.25■□□□□ 0.03
U2AF1-211ENST00000486519 DNM1Q05193 864 aaKnown RBP15.25■□□□□ 0.03
U2AF1-211ENST00000486519 MTM1Q13496 603 aa15.25■□□□□ 0.03
U2AF1-211ENST00000486519 ZCWPW2Q504Y3 356 aa15.25■□□□□ 0.03
U2AF1-211ENST00000486519 ZRANB3Q5FWF4 1079 aa15.25■□□□□ 0.03
U2AF1-211ENST00000486519 GDPD4Q6W3E5 623 aa15.25■□□□□ 0.03
U2AF1-211ENST00000486519 OR2AP1Q8NGE2 309 aa15.25■□□□□ 0.03
U2AF1-211ENST00000486519 TRIT1Q9H3H1 467 aaKnown RBP15.25■□□□□ 0.03
U2AF1-211ENST00000486519 THAP9Q9H5L6 903 aa15.25■□□□□ 0.03
U2AF1-211ENST00000486519 FBXO8Q9NRD0 319 aa15.25■□□□□ 0.03
U2AF1-211ENST00000486519 NDFIP2Q9NV92 336 aa15.25■□□□□ 0.03
U2AF1-211ENST00000486519 PLEKHM1Q9Y4G2 1056 aa15.25■□□□□ 0.03
U2AF1-211ENST00000486519 ILVBLA1L0T0 632 aa15.24■□□□□ 0.03
U2AF1-211ENST00000486519 PRSS38A1L453 326 aa15.24■□□□□ 0.03
U2AF1-211ENST00000486519 PIPSLA2A3N6 862 aa15.24■□□□□ 0.03
U2AF1-211ENST00000486519 A6NCN8 305 aa15.24■□□□□ 0.03
U2AF1-211ENST00000486519 ACTN4O43707 911 aaKnown RBP15.24■□□□□ 0.03
U2AF1-211ENST00000486519 PPP6R2O75170 966 aa15.24■□□□□ 0.03
U2AF1-211ENST00000486519 CREG1O75629 220 aa15.24■□□□□ 0.03
U2AF1-211ENST00000486519 PIGNO95427 931 aa15.24■□□□□ 0.03
U2AF1-211ENST00000486519 GM2AP17900 193 aa15.24■□□□□ 0.03
U2AF1-211ENST00000486519 CCL11P51671 97 aa15.24■□□□□ 0.03
U2AF1-211ENST00000486519 RPS18P62269 152 aaKnown RBP15.24■□□□□ 0.03
U2AF1-211ENST00000486519 GNA12Q03113 381 aa15.24■□□□□ 0.03
U2AF1-211ENST00000486519 DCAF17Q5H9S7 520 aaPredicted RBP15.24■□□□□ 0.03
U2AF1-211ENST00000486519 PAPD7Q5XG87 772 aaKnown RBP15.24■□□□□ 0.03
U2AF1-211ENST00000486519 SLC30A9Q6PML9 568 aa15.24■□□□□ 0.03
U2AF1-211ENST00000486519 TMEM110Q86TL2 294 aa15.24■□□□□ 0.03
U2AF1-211ENST00000486519 PLPP6Q8IY26 295 aa15.24■□□□□ 0.03
U2AF1-211ENST00000486519 DRC7Q8IY82 874 aa15.24■□□□□ 0.03
U2AF1-211ENST00000486519 ARHGEF2Q92974 986 aaKnown RBP15.24■□□□□ 0.03
U2AF1-211ENST00000486519 ISG20Q96AZ6 181 aaKnown RBP15.24■□□□□ 0.03
U2AF1-211ENST00000486519 PAGE5Q96GU1 130 aa15.24■□□□□ 0.03
U2AF1-211ENST00000486519 TKTL2Q9H0I9 626 aa15.24■□□□□ 0.03
U2AF1-211ENST00000486519 ACP6Q9NPH0 428 aa15.24■□□□□ 0.03
U2AF1-211ENST00000486519 SLAMF7Q9NQ25 335 aa15.24■□□□□ 0.03
U2AF1-211ENST00000486519 ARHGEF38Q9NXL2 777 aa15.24■□□□□ 0.03
U2AF1-211ENST00000486519 SIDT1Q9NXL6 827 aaKnown RBP15.24■□□□□ 0.03
U2AF1-211ENST00000486519 TACC2O95359 2948 aa15.24■□□□□ 0.03
U2AF1-211ENST00000486519 SPG11Q96JI7 2443 aa15.23■□□□□ 0.03
U2AF1-211ENST00000486519 IGLV3-10A0A075B6K4 115 aa15.23■□□□□ 0.03
U2AF1-211ENST00000486519 GSRP00390 522 aa15.23■□□□□ 0.03
U2AF1-211ENST00000486519 ACADSBP45954 432 aa15.23■□□□□ 0.03
U2AF1-211ENST00000486519 LIG3P49916 1009 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms