RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 TPRG1LQ5T0D9 272 aa12.95□□□□□ -0.34
CHMP3-208ENST00000486404 ARMC12Q5T9G4 340 aa12.95□□□□□ -0.34
CHMP3-208ENST00000486404 USP45Q70EL2 814 aa12.95□□□□□ -0.34
CHMP3-208ENST00000486404 TMPRSS7Q7RTY8 843 aa12.95□□□□□ -0.34
CHMP3-208ENST00000486404 RHOT1Q8IXI2 618 aa12.95□□□□□ -0.34
CHMP3-208ENST00000486404 PHACTR4Q8IZ21 702 aa12.95□□□□□ -0.34
CHMP3-208ENST00000486404 RBFAQ8N0V3 343 aa12.95□□□□□ -0.34
CHMP3-208ENST00000486404 NDUFAF2Q8N183 169 aa12.95□□□□□ -0.34
CHMP3-208ENST00000486404 SLC25A45Q8N413 288 aa12.95□□□□□ -0.34
CHMP3-208ENST00000486404 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.95□□□□□ -0.34
CHMP3-208ENST00000486404 TC2NQ8N9U0 490 aa12.95□□□□□ -0.34
CHMP3-208ENST00000486404 CCNYQ8ND76 341 aa12.95□□□□□ -0.34
CHMP3-208ENST00000486404 LMX1AQ8TE12 382 aa12.95□□□□□ -0.34
CHMP3-208ENST00000486404 FAF2Q96CS3 445 aa12.95□□□□□ -0.34
CHMP3-208ENST00000486404 MRFAP1L1Q96HT8 127 aa12.95□□□□□ -0.34
CHMP3-208ENST00000486404 IL12RB2Q99665 862 aa12.95□□□□□ -0.34
CHMP3-208ENST00000486404 SEMA3CQ99985 751 aa12.95□□□□□ -0.34
CHMP3-208ENST00000486404 MBNL1Q9NR56 388 aaKnown RBP12.95□□□□□ -0.34
CHMP3-208ENST00000486404 DDX56Q9NY93 547 aaKnown RBP12.95□□□□□ -0.34
CHMP3-208ENST00000486404 SPASTQ9UBP0 616 aa12.95□□□□□ -0.34
CHMP3-208ENST00000486404 B4GALT6Q9UBX8 382 aa12.95□□□□□ -0.34
CHMP3-208ENST00000486404 CFAP69A5D8W1 941 aa12.94□□□□□ -0.34
CHMP3-208ENST00000486404 A8MX80 341 aa12.94□□□□□ -0.34
CHMP3-208ENST00000486404 CACNB4O00305 520 aaPredicted RBP12.94□□□□□ -0.34
CHMP3-208ENST00000486404 APOL1O14791 398 aa12.94□□□□□ -0.34
CHMP3-208ENST00000486404 MATN3O15232 486 aa12.94□□□□□ -0.34
CHMP3-208ENST00000486404 RECQL5O94762 991 aaPredicted RBP12.94□□□□□ -0.34
CHMP3-208ENST00000486404 CR2P20023 1033 aa12.94□□□□□ -0.34
CHMP3-208ENST00000486404 CCNCP24863 283 aa12.94□□□□□ -0.34
CHMP3-208ENST00000486404 VIPR1P32241 457 aa12.94□□□□□ -0.34
CHMP3-208ENST00000486404 BLKP51451 505 aa12.94□□□□□ -0.34
CHMP3-208ENST00000486404 EPHB1P54762 984 aa12.94□□□□□ -0.34
CHMP3-208ENST00000486404 PPARDQ03181 441 aa12.94□□□□□ -0.34
CHMP3-208ENST00000486404 GBE1Q04446 702 aa12.94□□□□□ -0.34
CHMP3-208ENST00000486404 TRAF2Q12933 501 aa12.94□□□□□ -0.34
CHMP3-208ENST00000486404 EIF2B5Q13144 721 aaKnown RBP12.94□□□□□ -0.34
CHMP3-208ENST00000486404 MTM1Q13496 603 aa12.94□□□□□ -0.34
CHMP3-208ENST00000486404 ARHGEF7Q14155 803 aa12.94□□□□□ -0.34
CHMP3-208ENST00000486404 INPP5AQ14642 412 aa12.94□□□□□ -0.34
CHMP3-208ENST00000486404 NFATC4Q14934 902 aa12.94□□□□□ -0.34
CHMP3-208ENST00000486404 WSCD2Q2TBF2 565 aa12.94□□□□□ -0.34
CHMP3-208ENST00000486404 PRRT3Q5FWE3 981 aa12.94□□□□□ -0.34
CHMP3-208ENST00000486404 FAXCQ5TGI0 409 aa12.94□□□□□ -0.34
CHMP3-208ENST00000486404 DENND2CQ68D51 928 aa12.94□□□□□ -0.34
CHMP3-208ENST00000486404 ZCCHC8Q6NZY4 707 aaKnown RBP12.94□□□□□ -0.34
CHMP3-208ENST00000486404 CCNI2Q6ZMN8 369 aaPredicted RBP12.94□□□□□ -0.34
CHMP3-208ENST00000486404 RFX6Q8HWS3 928 aa12.94□□□□□ -0.34
CHMP3-208ENST00000486404 CCDC13Q8IYE1 715 aa12.94□□□□□ -0.34
CHMP3-208ENST00000486404 CCDC170Q8IYT3 715 aa12.94□□□□□ -0.34
CHMP3-208ENST00000486404 PQLC3Q8N755 202 aa12.94□□□□□ -0.34
CHMP3-208ENST00000486404 RAPGEF5Q92565 580 aa12.94□□□□□ -0.34
CHMP3-208ENST00000486404 NUS1Q96E22 293 aa12.94□□□□□ -0.34
CHMP3-208ENST00000486404 TMEM121BQ9BXQ6 578 aaPredicted RBP12.94□□□□□ -0.34
CHMP3-208ENST00000486404 RBSNQ9H1K0 784 aa12.94□□□□□ -0.34
CHMP3-208ENST00000486404 RBM22Q9NW64 420 aaKnown RBP eCLIP12.94□□□□□ -0.34
CHMP3-208ENST00000486404 NCKIPSDQ9NZQ3 722 aa12.94□□□□□ -0.34
CHMP3-208ENST00000486404 KLQ9UEF7 1012 aa12.94□□□□□ -0.34
CHMP3-208ENST00000486404 PHTF1Q9UMS5 762 aa12.94□□□□□ -0.34
CHMP3-208ENST00000486404 DOLKQ9UPQ8 538 aa12.94□□□□□ -0.34
CHMP3-208ENST00000486404 OR1A2Q9Y585 309 aa12.94□□□□□ -0.34
CHMP3-208ENST00000486404 HEY1Q9Y5J3 304 aa12.94□□□□□ -0.34
CHMP3-208ENST00000486404 RAI2Q9Y5P3 530 aa12.94□□□□□ -0.34
CHMP3-208ENST00000486404 FAM149AA5PLN7 773 aa12.93□□□□□ -0.34
CHMP3-208ENST00000486404 FAM221BA6H8Z2 402 aa12.93□□□□□ -0.34
CHMP3-208ENST00000486404 GOLGA6CA6NDK9 693 aa12.93□□□□□ -0.34
CHMP3-208ENST00000486404 GOLGA6BA6NDN3 693 aa12.93□□□□□ -0.34
CHMP3-208ENST00000486404 ZNF487B1APH4 448 aa12.93□□□□□ -0.34
CHMP3-208ENST00000486404 K7ESM1 405 aa12.93□□□□□ -0.34
CHMP3-208ENST00000486404 PPP1R12AO14974 1030 aaPredicted RBP12.93□□□□□ -0.34
CHMP3-208ENST00000486404 SCAMP1O15126 338 aa12.93□□□□□ -0.34
CHMP3-208ENST00000486404 HTRA2O43464 458 aaPredicted RBP12.93□□□□□ -0.34
CHMP3-208ENST00000486404 PSTPIP1O43586 416 aa12.93□□□□□ -0.34
CHMP3-208ENST00000486404 RASGRP1O95267 797 aa12.93□□□□□ -0.34
CHMP3-208ENST00000486404 PGLSO95336 258 aa12.93□□□□□ -0.34
CHMP3-208ENST00000486404 ANXA6P08133 673 aa12.93□□□□□ -0.34
CHMP3-208ENST00000486404 GOLGA6DP0CG33 693 aa12.93□□□□□ -0.34
CHMP3-208ENST00000486404 CTSEP14091 401 aa12.93□□□□□ -0.34
CHMP3-208ENST00000486404 CCNB1P14635 433 aa12.93□□□□□ -0.34
CHMP3-208ENST00000486404 ZFXP17010 805 aaPredicted RBP12.93□□□□□ -0.34
CHMP3-208ENST00000486404 COMTP21964 271 aa12.93□□□□□ -0.34
CHMP3-208ENST00000486404 CES1P23141 567 aa12.93□□□□□ -0.34
CHMP3-208ENST00000486404 ACP1P24666 158 aa12.93□□□□□ -0.34
CHMP3-208ENST00000486404 PEX5P50542 639 aa12.93□□□□□ -0.34
CHMP3-208ENST00000486404 DUSP3P51452 185 aaPredicted RBP12.93□□□□□ -0.34
CHMP3-208ENST00000486404 DYNLT1P63172 113 aa12.93□□□□□ -0.34
CHMP3-208ENST00000486404 DSC2Q02487 901 aa12.93□□□□□ -0.34
CHMP3-208ENST00000486404 AGERQ15109 404 aa12.93□□□□□ -0.34
CHMP3-208ENST00000486404 SMAD1Q15797 465 aaKnown RBP12.93□□□□□ -0.34
CHMP3-208ENST00000486404 DEFB133Q30KQ1 61 aa12.93□□□□□ -0.34
CHMP3-208ENST00000486404 HES3Q5TGS1 186 aa12.93□□□□□ -0.34
CHMP3-208ENST00000486404 LRRC38Q5VT99 294 aa12.93□□□□□ -0.34
CHMP3-208ENST00000486404 LIPIQ6XZB0 460 aa12.93□□□□□ -0.34
CHMP3-208ENST00000486404 TMPRSS12Q86WS5 348 aa12.93□□□□□ -0.34
CHMP3-208ENST00000486404 VSIG1Q86XK7 387 aa12.93□□□□□ -0.34
CHMP3-208ENST00000486404 HID1Q8IV36 788 aa12.93□□□□□ -0.34
CHMP3-208ENST00000486404 FSTL5Q8N475 847 aaPredicted RBP12.93□□□□□ -0.34
CHMP3-208ENST00000486404 TEX26Q8N6G2 289 aa12.93□□□□□ -0.34
CHMP3-208ENST00000486404 MAML1Q92585 1016 aa12.93□□□□□ -0.34
CHMP3-208ENST00000486404 GLMNQ92990 594 aa12.93□□□□□ -0.34
CHMP3-208ENST00000486404 HDAC11Q96DB2 347 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms