RNA–Protein interactions for RNA: ENST00000485867.5

SMC4-217, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-217ENST00000485867 DRAP1Q14919 205 aaPredicted RBP6.78□□□□□ -1.32
SMC4-217ENST00000485867 SETMARQ53H47 684 aaPredicted RBP6.78□□□□□ -1.32
SMC4-217ENST00000485867 CRYBG3Q68DQ2 2970 aa6.78□□□□□ -1.32
SMC4-217ENST00000485867 ZCCHC8Q6NZY4 707 aaKnown RBP6.78□□□□□ -1.32
SMC4-217ENST00000485867 TICAM1Q8IUC6 712 aa6.78□□□□□ -1.32
SMC4-217ENST00000485867 STK40Q8N2I9 435 aa6.78□□□□□ -1.32
SMC4-217ENST00000485867 C12orf29Q8N999 325 aa6.78□□□□□ -1.32
SMC4-217ENST00000485867 SYAP1Q96A49 352 aaPredicted RBP6.78□□□□□ -1.32
SMC4-217ENST00000485867 TTC17Q96AE7 1141 aa6.78□□□□□ -1.32
SMC4-217ENST00000485867 DNAJC19Q96DA6 116 aa6.78□□□□□ -1.32
SMC4-217ENST00000485867 LMLNQ96KR4 655 aa6.78□□□□□ -1.32
SMC4-217ENST00000485867 OLFML3Q9NRN5 406 aa6.78□□□□□ -1.32
SMC4-217ENST00000485867 TUBD1Q9UJT1 453 aa6.78□□□□□ -1.32
SMC4-217ENST00000485867 STOML2Q9UJZ1 356 aa6.78□□□□□ -1.32
SMC4-217ENST00000485867 INTS6Q9UL03 887 aaKnown RBP6.78□□□□□ -1.32
SMC4-217ENST00000485867 STRIP2Q9ULQ0 834 aa6.78□□□□□ -1.32
SMC4-217ENST00000485867 MED13LQ71F56 2210 aa6.78□□□□□ -1.32
SMC4-217ENST00000485867 CELSR2Q9HCU4 2923 aa6.78□□□□□ -1.32
SMC4-217ENST00000485867 ITIH6Q6UXX5 1313 aa6.77□□□□□ -1.32
SMC4-217ENST00000485867 ZFHX3Q15911 3703 aa6.77□□□□□ -1.33
SMC4-217ENST00000485867 EDDM13A0A1B0GTR0 161 aa6.77□□□□□ -1.33
SMC4-217ENST00000485867 TARSL2A2RTX5 802 aaKnown RBP6.77□□□□□ -1.33
SMC4-217ENST00000485867 TTC34A8MYJ7 566 aa6.77□□□□□ -1.33
SMC4-217ENST00000485867 SLC7A4O43246 635 aa6.77□□□□□ -1.33
SMC4-217ENST00000485867 PLRG1O43660 514 aaKnown RBP6.77□□□□□ -1.33
SMC4-217ENST00000485867 AGFG2O95081 481 aa6.77□□□□□ -1.33
SMC4-217ENST00000485867 RECKO95980 971 aa6.77□□□□□ -1.33
SMC4-217ENST00000485867 IL1BP01584 269 aa6.77□□□□□ -1.33
SMC4-217ENST00000485867 RNF224P0DH78 156 aa6.77□□□□□ -1.33
SMC4-217ENST00000485867 HGFP14210 728 aa6.77□□□□□ -1.33
SMC4-217ENST00000485867 PRLRP16471 622 aa6.77□□□□□ -1.33
SMC4-217ENST00000485867 CSKP41240 450 aa6.77□□□□□ -1.33
SMC4-217ENST00000485867 NDST1P52848 882 aa6.77□□□□□ -1.33
SMC4-217ENST00000485867 EIF3IQ13347 325 aaKnown RBP6.77□□□□□ -1.33
SMC4-217ENST00000485867 TRPC3Q13507 836 aa6.77□□□□□ -1.33
SMC4-217ENST00000485867 PSMD6Q15008 389 aa6.77□□□□□ -1.33
SMC4-217ENST00000485867 BMT2Q1RMZ1 405 aa6.77□□□□□ -1.33
SMC4-217ENST00000485867 ZNF699Q32M78 642 aa6.77□□□□□ -1.33
SMC4-217ENST00000485867 ZNF542PQ5EBM4 170 aa6.77□□□□□ -1.33
SMC4-217ENST00000485867 ZNF667Q5HYK9 610 aa6.77□□□□□ -1.33
SMC4-217ENST00000485867 BORAQ6PGQ7 559 aa6.77□□□□□ -1.33
SMC4-217ENST00000485867 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.77□□□□□ -1.33
SMC4-217ENST00000485867 CENPQQ7L2Z9 268 aaPredicted RBP6.77□□□□□ -1.33
SMC4-217ENST00000485867 RSRC2Q7L4I2 434 aaKnown RBP6.77□□□□□ -1.33
SMC4-217ENST00000485867 B3GNT8Q7Z7M8 397 aa6.77□□□□□ -1.33
SMC4-217ENST00000485867 DSG4Q86SJ6 1040 aa6.77□□□□□ -1.33
SMC4-217ENST00000485867 CRYBG2Q8N1P7 616 aa6.77□□□□□ -1.33
SMC4-217ENST00000485867 FBXO39Q8N4B4 442 aa6.77□□□□□ -1.33
SMC4-217ENST00000485867 C19orf47Q8N9M1 422 aaKnown RBP6.77□□□□□ -1.33
SMC4-217ENST00000485867 KDM1BQ8NB78 822 aa6.77□□□□□ -1.33
SMC4-217ENST00000485867 ZNF548Q8NEK5 533 aaPredicted RBP6.77□□□□□ -1.33
SMC4-217ENST00000485867 ADCY4Q8NFM4 1077 aa6.77□□□□□ -1.33
SMC4-217ENST00000485867 RASSF8Q8NHQ8 419 aa6.77□□□□□ -1.33
SMC4-217ENST00000485867 WDR48Q8TAF3 677 aa6.77□□□□□ -1.33
SMC4-217ENST00000485867 TMA16Q96EY4 203 aaKnown RBP6.77□□□□□ -1.33
SMC4-217ENST00000485867 MYOCQ99972 504 aa6.77□□□□□ -1.33
SMC4-217ENST00000485867 CALN1Q9BXU9 219 aa6.77□□□□□ -1.33
SMC4-217ENST00000485867 NCKIPSDQ9NZQ3 722 aa6.77□□□□□ -1.33
SMC4-217ENST00000485867 SEPT10Q9P0V9 454 aa6.77□□□□□ -1.33
SMC4-217ENST00000485867 FBLN5Q9UBX5 448 aa6.77□□□□□ -1.33
SMC4-217ENST00000485867 MTORP42345 2549 aa6.77□□□□□ -1.33
SMC4-217ENST00000485867 NTN3O00634 580 aaPredicted RBP6.76□□□□□ -1.33
SMC4-217ENST00000485867 MUSKO15146 869 aa6.76□□□□□ -1.33
SMC4-217ENST00000485867 NVLO15381 856 aaKnown RBP6.76□□□□□ -1.33
SMC4-217ENST00000485867 SLC31A1O15431 190 aa6.76□□□□□ -1.33
SMC4-217ENST00000485867 MTSS1O43312 755 aa6.76□□□□□ -1.33
SMC4-217ENST00000485867 LATS1O95835 1130 aa6.76□□□□□ -1.33
SMC4-217ENST00000485867 MC3RP41968 323 aa6.76□□□□□ -1.33
SMC4-217ENST00000485867 GIPRP48546 466 aa6.76□□□□□ -1.33
SMC4-217ENST00000485867 KCNC1P48547 511 aa6.76□□□□□ -1.33
SMC4-217ENST00000485867 ANAPC15P60006 121 aa6.76□□□□□ -1.33
SMC4-217ENST00000485867 HNRNPKP61978 463 aaKnown RBP eCLIP6.76□□□□□ -1.33
SMC4-217ENST00000485867 HMGN5P82970 282 aaKnown RBP6.76□□□□□ -1.33
SMC4-217ENST00000485867 CYP24A1Q07973 514 aa6.76□□□□□ -1.33
SMC4-217ENST00000485867 SPIDRQ14159 915 aa6.76□□□□□ -1.33
SMC4-217ENST00000485867 ELAVL3Q14576 367 aaKnown RBP6.76□□□□□ -1.33
SMC4-217ENST00000485867 SNRNP35Q16560 246 aaKnown RBP6.76□□□□□ -1.33
SMC4-217ENST00000485867 RILPL1Q5EBL4 403 aa6.76□□□□□ -1.33
SMC4-217ENST00000485867 MPP7Q5T2T1 576 aa6.76□□□□□ -1.33
SMC4-217ENST00000485867 AGBL4Q5VU57 503 aa6.76□□□□□ -1.33
SMC4-217ENST00000485867 ERICH6BQ5W0A0 696 aa6.76□□□□□ -1.33
SMC4-217ENST00000485867 LIPIQ6XZB0 460 aa6.76□□□□□ -1.33
SMC4-217ENST00000485867 RAB11FIP2Q7L804 512 aa6.76□□□□□ -1.33
SMC4-217ENST00000485867 ZFAND4Q86XD8 727 aa6.76□□□□□ -1.33
SMC4-217ENST00000485867 SLC22A18ASQ8N1D0 253 aa6.76□□□□□ -1.33
SMC4-217ENST00000485867 ZNF557Q8N988 423 aaPredicted RBP6.76□□□□□ -1.33
SMC4-217ENST00000485867 FAM184AQ8NB25 1140 aa6.76□□□□□ -1.33
SMC4-217ENST00000485867 SSC4DQ8WTU2 575 aa6.76□□□□□ -1.33
SMC4-217ENST00000485867 PTPRN2Q92932 1015 aa6.76□□□□□ -1.33
SMC4-217ENST00000485867 NAT6Q93015 286 aa6.76□□□□□ -1.33
SMC4-217ENST00000485867 CCDC127Q96BQ5 260 aa6.76□□□□□ -1.33
SMC4-217ENST00000485867 NOX5Q96PH1 765 aa6.76□□□□□ -1.33
SMC4-217ENST00000485867 LLPHQ9BRT6 129 aaKnown RBP6.76□□□□□ -1.33
SMC4-217ENST00000485867 ZNF768Q9H5H4 540 aaKnown RBP6.76□□□□□ -1.33
SMC4-217ENST00000485867 SYNDIG1Q9H7V2 258 aa6.76□□□□□ -1.33
SMC4-217ENST00000485867 KIAA1586Q9HCI6 787 aa6.76□□□□□ -1.33
SMC4-217ENST00000485867 EPB41L5Q9HCM4 733 aa6.76□□□□□ -1.33
SMC4-217ENST00000485867 FZD3Q9NPG1 666 aa6.76□□□□□ -1.33
SMC4-217ENST00000485867 DNAJC28Q9NX36 388 aa6.76□□□□□ -1.33
SMC4-217ENST00000485867 PISDQ9UG56 409 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms