RNA–Protein interactions for RNA: ENST00000485513.1

HLA-F-227, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-227ENST00000485513 ERVPABLB-1P60509 514 aa25.84■■□□□ 1.73
HLA-F-227ENST00000485513 SRP54P61011 504 aaKnown RBP25.84■■□□□ 1.73
HLA-F-227ENST00000485513 POLR2LP62875 67 aaKnown RBP25.84■■□□□ 1.73
HLA-F-227ENST00000485513 TLE3Q04726 772 aa25.84■■□□□ 1.73
HLA-F-227ENST00000485513 RALGDSQ12967 914 aa25.84■■□□□ 1.73
HLA-F-227ENST00000485513 NR1I3Q14994 352 aa25.84■■□□□ 1.73
HLA-F-227ENST00000485513 IQCB1Q15051 598 aa25.84■■□□□ 1.73
HLA-F-227ENST00000485513 TCEA2Q15560 299 aa25.84■■□□□ 1.73
HLA-F-227ENST00000485513 TMCO4Q5TGY1 634 aa25.84■■□□□ 1.73
HLA-F-227ENST00000485513 LVRNQ6Q4G3 990 aa25.84■■□□□ 1.73
HLA-F-227ENST00000485513 TP53INP2Q8IXH6 220 aa25.84■■□□□ 1.73
HLA-F-227ENST00000485513 SDR16C5Q8N3Y7 309 aa25.84■■□□□ 1.73
HLA-F-227ENST00000485513 WDR48Q8TAF3 677 aa25.84■■□□□ 1.73
HLA-F-227ENST00000485513 ATXN7L3BQ96GX2 97 aa25.84■■□□□ 1.73
HLA-F-227ENST00000485513 HIC2Q96JB3 615 aa25.84■■□□□ 1.73
HLA-F-227ENST00000485513 WDR92Q96MX6 357 aa25.84■■□□□ 1.73
HLA-F-227ENST00000485513 FCRL3Q96P31 734 aaPredicted RBP25.84■■□□□ 1.73
HLA-F-227ENST00000485513 PSKH2Q96QS6 385 aa25.84■■□□□ 1.73
HLA-F-227ENST00000485513 GULP1Q9UBP9 304 aa25.84■■□□□ 1.73
HLA-F-227ENST00000485513 SATB2Q9UPW6 733 aa25.84■■□□□ 1.73
HLA-F-227ENST00000485513 ENTPD2Q9Y5L3 495 aa25.84■■□□□ 1.73
HLA-F-227ENST00000485513 RECQL5O94762 991 aaPredicted RBP25.83■■□□□ 1.73
HLA-F-227ENST00000485513 ELFN1P0C7U0 828 aa25.83■■□□□ 1.73
HLA-F-227ENST00000485513 IL1R2P27930 398 aa25.83■■□□□ 1.73
HLA-F-227ENST00000485513 ARL4AP40617 200 aa25.83■■□□□ 1.73
HLA-F-227ENST00000485513 AP1S1P61966 158 aa25.83■■□□□ 1.73
HLA-F-227ENST00000485513 LBRQ14739 615 aaKnown RBP25.83■■□□□ 1.73
HLA-F-227ENST00000485513 DPYSL2Q16555 572 aa25.83■■□□□ 1.73
HLA-F-227ENST00000485513 SMTNL2Q2TAL5 461 aa25.83■■□□□ 1.73
HLA-F-227ENST00000485513 FIGNQ5HY92 759 aa25.83■■□□□ 1.73
HLA-F-227ENST00000485513 C3orf38Q5JPI3 329 aa25.83■■□□□ 1.73
HLA-F-227ENST00000485513 LIPIQ6XZB0 460 aa25.83■■□□□ 1.73
HLA-F-227ENST00000485513 ARL10Q8N8L6 244 aa25.83■■□□□ 1.73
HLA-F-227ENST00000485513 PLA2G15Q8NCC3 412 aa25.83■■□□□ 1.73
HLA-F-227ENST00000485513 PCDH19Q8TAB3 1148 aa25.83■■□□□ 1.73
HLA-F-227ENST00000485513 NAF1Q96HR8 494 aaKnown RBP25.83■■□□□ 1.73
HLA-F-227ENST00000485513 ZNF599Q96NL3 588 aa25.83■■□□□ 1.73
HLA-F-227ENST00000485513 CCDC3Q9BQI4 270 aa25.83■■□□□ 1.73
HLA-F-227ENST00000485513 SIRPGQ9P1W8 387 aa25.83■■□□□ 1.73
HLA-F-227ENST00000485513 SMG1Q96Q15 3661 aaKnown RBP25.82■■□□□ 1.72
HLA-F-227ENST00000485513 TRAFD1O14545 582 aaPredicted RBP25.82■■□□□ 1.72
HLA-F-227ENST00000485513 SLC10A7Q0GE19 358 aa25.82■■□□□ 1.72
HLA-F-227ENST00000485513 BOLA3Q53S33 107 aa25.82■■□□□ 1.72
HLA-F-227ENST00000485513 TDRD12Q587J7 1177 aaKnown RBP25.82■■□□□ 1.72
HLA-F-227ENST00000485513 NYAP1Q6ZVC0 841 aa25.82■■□□□ 1.72
HLA-F-227ENST00000485513 DPPA4Q7L190 304 aa25.82■■□□□ 1.72
HLA-F-227ENST00000485513 GKN2Q86XP6 184 aa25.82■■□□□ 1.72
HLA-F-227ENST00000485513 KYQ8NBH2 561 aa25.82■■□□□ 1.72
HLA-F-227ENST00000485513 HSPH1Q92598 858 aa25.82■■□□□ 1.72
HLA-F-227ENST00000485513 ASCL3Q9NQ33 180 aa25.82■■□□□ 1.72
HLA-F-227ENST00000485513 THSD1Q9NS62 852 aa25.82■■□□□ 1.72
HLA-F-227ENST00000485513 TNFP01375 233 aa25.81■■□□□ 1.72
HLA-F-227ENST00000485513 TCF4P15884 667 aa25.81■■□□□ 1.72
HLA-F-227ENST00000485513 AMPD1P23109 780 aa25.81■■□□□ 1.72
HLA-F-227ENST00000485513 ZNF235Q14590 738 aa25.81■■□□□ 1.72
HLA-F-227ENST00000485513 IGF2-ASQ6U949 168 aa25.81■■□□□ 1.72
HLA-F-227ENST00000485513 TMCO3Q6UWJ1 677 aa25.81■■□□□ 1.72
HLA-F-227ENST00000485513 POLNQ7Z5Q5 900 aa25.81■■□□□ 1.72
HLA-F-227ENST00000485513 NSMCE3Q96MG7 304 aa25.81■■□□□ 1.72
HLA-F-227ENST00000485513 FUCA2Q9BTY2 467 aa25.81■■□□□ 1.72
HLA-F-227ENST00000485513 SYNDIG1Q9H7V2 258 aa25.81■■□□□ 1.72
HLA-F-227ENST00000485513 STAU2Q9NUL3 570 aaKnown RBP eCLIP25.81■■□□□ 1.72
HLA-F-227ENST00000485513 ETNK2Q9NVF9 386 aa25.81■■□□□ 1.72
HLA-F-227ENST00000485513 GPR34Q9UPC5 381 aa25.81■■□□□ 1.72
HLA-F-227ENST00000485513 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP25.8■■□□□ 1.72
HLA-F-227ENST00000485513 A0A1W2PNU3 283 aaPredicted RBP25.8■■□□□ 1.72
HLA-F-227ENST00000485513 CACNB4O00305 520 aaPredicted RBP25.8■■□□□ 1.72
HLA-F-227ENST00000485513 CASC3O15234 703 aaKnown RBP25.8■■□□□ 1.72
HLA-F-227ENST00000485513 RBMS1P29558 406 aaKnown RBP25.8■■□□□ 1.72
HLA-F-227ENST00000485513 KIAA1024LP59773 190 aa25.8■■□□□ 1.72
HLA-F-227ENST00000485513 SPIDRQ14159 915 aa25.8■■□□□ 1.72
HLA-F-227ENST00000485513 PIGHQ14442 188 aaPredicted RBP25.8■■□□□ 1.72
HLA-F-227ENST00000485513 KIF26BQ2KJY2 2108 aa25.8■■□□□ 1.72
HLA-F-227ENST00000485513 HGSNATQ68CP4 663 aa25.8■■□□□ 1.72
HLA-F-227ENST00000485513 GPR155Q7Z3F1 870 aa25.8■■□□□ 1.72
HLA-F-227ENST00000485513 FUBP1Q96AE4 644 aaKnown RBP25.8■■□□□ 1.72
HLA-F-227ENST00000485513 PDXPQ96GD0 296 aa25.8■■□□□ 1.72
HLA-F-227ENST00000485513 CSPG4P5Q96PW8 444 aa25.8■■□□□ 1.72
HLA-F-227ENST00000485513 RBM15Q96T37 977 aaKnown RBP eCLIP25.8■■□□□ 1.72
HLA-F-227ENST00000485513 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP25.8■■□□□ 1.72
HLA-F-227ENST00000485513 BZW2Q9Y6E2 419 aaKnown RBP25.8■■□□□ 1.72
HLA-F-227ENST00000485513 DGKBQ9Y6T7 804 aa25.8■■□□□ 1.72
HLA-F-227ENST00000485513 TTC24A2A3L6 582 aaPredicted RBP25.79■■□□□ 1.72
HLA-F-227ENST00000485513 A8MX80 341 aa25.79■■□□□ 1.72
HLA-F-227ENST00000485513 RARAP10276 462 aa25.79■■□□□ 1.72
HLA-F-227ENST00000485513 HSPA9P38646 679 aaKnown RBP25.79■■□□□ 1.72
HLA-F-227ENST00000485513 BROXQ5VW32 411 aa25.79■■□□□ 1.72
HLA-F-227ENST00000485513 KCTD16Q68DU8 428 aa25.79■■□□□ 1.72
HLA-F-227ENST00000485513 OR56A4Q8NGH8 313 aa25.79■■□□□ 1.72
HLA-F-227ENST00000485513 OR1E3Q8WZA6 343 aa25.79■■□□□ 1.72
HLA-F-227ENST00000485513 CCDC74AQ96AQ1 378 aa25.79■■□□□ 1.72
HLA-F-227ENST00000485513 B4GALT6Q9UBX8 382 aa25.79■■□□□ 1.72
HLA-F-227ENST00000485513 PCDHGA8Q9Y5G5 932 aa25.79■■□□□ 1.72
HLA-F-227ENST00000485513 A0A1W2PQJ5 194 aa25.78■■□□□ 1.72
HLA-F-227ENST00000485513 TMEM202A6NGA9 273 aa25.78■■□□□ 1.72
HLA-F-227ENST00000485513 NTN3O00634 580 aaPredicted RBP25.78■■□□□ 1.72
HLA-F-227ENST00000485513 PEX11BO96011 259 aa25.78■■□□□ 1.72
HLA-F-227ENST00000485513 GM2AP17900 193 aa25.78■■□□□ 1.72
HLA-F-227ENST00000485513 KELP23276 732 aa25.78■■□□□ 1.72
HLA-F-227ENST00000485513 TPM4P67936 248 aa25.78■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms