RNA–Protein interactions for RNA: ENST00000485407.1

NHLRC3-205, Transcript of NHL repeat containing 3, humanhuman

TSL 3

Gene NHLRC3, Length 623 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-205ENST00000485407 FUT10Q6P4F1 479 aa5.79□□□□□ -1.48
NHLRC3-205ENST00000485407 ZC3H14Q6PJT7 736 aaKnown RBP5.79□□□□□ -1.48
NHLRC3-205ENST00000485407 TMEM184AQ6ZMB5 413 aa5.79□□□□□ -1.48
NHLRC3-205ENST00000485407 RTL10Q7L3V2 364 aa5.79□□□□□ -1.48
NHLRC3-205ENST00000485407 SPRED2Q7Z698 418 aa5.79□□□□□ -1.48
NHLRC3-205ENST00000485407 CPLX4Q7Z7G2 160 aa5.79□□□□□ -1.48
NHLRC3-205ENST00000485407 ARMC8Q8IUR7 673 aa5.79□□□□□ -1.48
NHLRC3-205ENST00000485407 WDR49Q8IV35 697 aa5.79□□□□□ -1.48
NHLRC3-205ENST00000485407 NELFCDQ8IXH7 590 aa5.79□□□□□ -1.48
NHLRC3-205ENST00000485407 APPL2Q8NEU8 664 aa5.79□□□□□ -1.48
NHLRC3-205ENST00000485407 SPATA18Q8TC71 538 aa5.79□□□□□ -1.48
NHLRC3-205ENST00000485407 GDPD5Q8WTR4 605 aa5.79□□□□□ -1.48
NHLRC3-205ENST00000485407 GFM2Q969S9 779 aaKnown RBP5.79□□□□□ -1.48
NHLRC3-205ENST00000485407 GRAMD1AQ96CP6 724 aa5.79□□□□□ -1.48
NHLRC3-205ENST00000485407 PABPC5Q96DU9 382 aaKnown RBP5.79□□□□□ -1.48
NHLRC3-205ENST00000485407 RADILQ96JH8 1075 aa5.79□□□□□ -1.48
NHLRC3-205ENST00000485407 NAP1L5Q96NT1 182 aaPredicted RBP5.79□□□□□ -1.48
NHLRC3-205ENST00000485407 FNBP1Q96RU3 617 aa5.79□□□□□ -1.48
NHLRC3-205ENST00000485407 MYOCQ99972 504 aa5.79□□□□□ -1.48
NHLRC3-205ENST00000485407 TCF25Q9BQ70 676 aa5.79□□□□□ -1.48
NHLRC3-205ENST00000485407 FAM213AQ9BRX8 229 aa5.79□□□□□ -1.48
NHLRC3-205ENST00000485407 TTPALQ9BTX7 342 aa5.79□□□□□ -1.48
NHLRC3-205ENST00000485407 HERC2P3Q9BVR0 1158 aa5.79□□□□□ -1.48
NHLRC3-205ENST00000485407 CPEB1Q9BZB8 566 aaKnown RBP5.79□□□□□ -1.48
NHLRC3-205ENST00000485407 CLSTN2Q9H4D0 955 aa5.79□□□□□ -1.48
NHLRC3-205ENST00000485407 ZBTB26Q9HCK0 441 aa5.79□□□□□ -1.48
NHLRC3-205ENST00000485407 ENTPD7Q9NQZ7 604 aa5.79□□□□□ -1.48
NHLRC3-205ENST00000485407 EIF2B3Q9NR50 452 aaKnown RBP5.79□□□□□ -1.48
NHLRC3-205ENST00000485407 PLSCR4Q9NRQ2 329 aa5.79□□□□□ -1.48
NHLRC3-205ENST00000485407 MRPL17Q9NRX2 175 aaKnown RBP5.79□□□□□ -1.48
NHLRC3-205ENST00000485407 RLIMQ9NVW2 624 aa5.79□□□□□ -1.48
NHLRC3-205ENST00000485407 MARCH5Q9NX47 278 aa5.79□□□□□ -1.48
NHLRC3-205ENST00000485407 RBAKQ9NYW8 714 aaPredicted RBP5.79□□□□□ -1.48
NHLRC3-205ENST00000485407 GIMAP2Q9UG22 337 aa5.79□□□□□ -1.48
NHLRC3-205ENST00000485407 FRMD4BQ9Y2L6 1034 aa5.79□□□□□ -1.48
NHLRC3-205ENST00000485407 PRG3Q9Y2Y8 225 aaPredicted RBP5.79□□□□□ -1.48
NHLRC3-205ENST00000485407 HELZ2Q9BYK8 2649 aaKnown RBP5.79□□□□□ -1.48
NHLRC3-205ENST00000485407 SPEGQ15772 3267 aa5.79□□□□□ -1.48
NHLRC3-205ENST00000485407 COL4A4P53420 1690 aaPredicted RBP5.79□□□□□ -1.48
NHLRC3-205ENST00000485407 VWA8A3KMH1 1905 aa5.78□□□□□ -1.48
NHLRC3-205ENST00000485407 ATG2AQ2TAZ0 1938 aa5.78□□□□□ -1.48
NHLRC3-205ENST00000485407 ZZEF1O43149 2961 aa5.78□□□□□ -1.48
NHLRC3-205ENST00000485407 CASTOR2A6NHX0 329 aa5.78□□□□□ -1.48
NHLRC3-205ENST00000485407 CYSRT1A8MQ03 144 aa5.78□□□□□ -1.48
NHLRC3-205ENST00000485407 H3BQ06 376 aaPredicted RBP5.78□□□□□ -1.48
NHLRC3-205ENST00000485407 M0QZQ0 153 aa5.78□□□□□ -1.48
NHLRC3-205ENST00000485407 CETN3O15182 167 aa5.78□□□□□ -1.48
NHLRC3-205ENST00000485407 CLIC2O15247 247 aa5.78□□□□□ -1.48
NHLRC3-205ENST00000485407 PTP4A3O75365 173 aa5.78□□□□□ -1.48
NHLRC3-205ENST00000485407 FGFR1OPO95684 399 aaKnown RBP5.78□□□□□ -1.48
NHLRC3-205ENST00000485407 CXCL14O95715 111 aa5.78□□□□□ -1.48
NHLRC3-205ENST00000485407 HPXP02790 462 aa5.78□□□□□ -1.48
NHLRC3-205ENST00000485407 NR3C1P04150 777 aa5.78□□□□□ -1.48
NHLRC3-205ENST00000485407 URODP06132 367 aa5.78□□□□□ -1.48
NHLRC3-205ENST00000485407 ANXA6P08133 673 aa5.78□□□□□ -1.48
NHLRC3-205ENST00000485407 CD8BP10966 210 aa5.78□□□□□ -1.48
NHLRC3-205ENST00000485407 HOXB8P17481 243 aaPredicted RBP5.78□□□□□ -1.48
NHLRC3-205ENST00000485407 NR2F2P24468 414 aa5.78□□□□□ -1.48
NHLRC3-205ENST00000485407 CCNE1P24864 410 aa5.78□□□□□ -1.48
NHLRC3-205ENST00000485407 DNAJB1P25685 340 aa5.78□□□□□ -1.48
NHLRC3-205ENST00000485407 GTF2H1P32780 548 aa5.78□□□□□ -1.48
NHLRC3-205ENST00000485407 PSMC2P35998 433 aaKnown RBP5.78□□□□□ -1.48
NHLRC3-205ENST00000485407 PBX3P40426 434 aa5.78□□□□□ -1.48
NHLRC3-205ENST00000485407 PTDSS1P48651 473 aaKnown RBP5.78□□□□□ -1.48
NHLRC3-205ENST00000485407 GLUD2P49448 558 aa5.78□□□□□ -1.48
NHLRC3-205ENST00000485407 ZNF135P52742 658 aaPredicted RBP5.78□□□□□ -1.48
NHLRC3-205ENST00000485407 ERVFRD-1P60508 538 aa5.78□□□□□ -1.48
NHLRC3-205ENST00000485407 RBP5P82980 135 aa5.78□□□□□ -1.48
NHLRC3-205ENST00000485407 ZXDAP98168 799 aa5.78□□□□□ -1.48
NHLRC3-205ENST00000485407 CYP24A1Q07973 514 aa5.78□□□□□ -1.48
NHLRC3-205ENST00000485407 SIGLEC14Q08ET2 396 aa5.78□□□□□ -1.48
NHLRC3-205ENST00000485407 GALNT2Q10471 571 aa5.78□□□□□ -1.48
NHLRC3-205ENST00000485407 PTPN14Q15678 1187 aa5.78□□□□□ -1.48
NHLRC3-205ENST00000485407 DUSP6Q16828 381 aa5.78□□□□□ -1.48
NHLRC3-205ENST00000485407 PLEKHN1Q494U1 663 aaPredicted RBP5.78□□□□□ -1.48
NHLRC3-205ENST00000485407 ZCWPW2Q504Y3 356 aa5.78□□□□□ -1.48
NHLRC3-205ENST00000485407 CRB2Q5IJ48 1285 aa5.78□□□□□ -1.48
NHLRC3-205ENST00000485407 GLRA4Q5JXX5 417 aa5.78□□□□□ -1.48
NHLRC3-205ENST00000485407 JADE1Q6IE81 842 aa5.78□□□□□ -1.48
NHLRC3-205ENST00000485407 CD300LGQ6UXG3 332 aa5.78□□□□□ -1.48
NHLRC3-205ENST00000485407 RBM43Q6ZSC3 357 aaKnown RBP5.78□□□□□ -1.48
NHLRC3-205ENST00000485407 INTS8Q75QN2 995 aaKnown RBP5.78□□□□□ -1.48
NHLRC3-205ENST00000485407 ZNF572Q7Z3I7 529 aaPredicted RBP5.78□□□□□ -1.48
NHLRC3-205ENST00000485407 ANKS1BQ7Z6G8 1248 aa5.78□□□□□ -1.48
NHLRC3-205ENST00000485407 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.78□□□□□ -1.48
NHLRC3-205ENST00000485407 TMEM173Q86WV6 379 aaPredicted RBP5.78□□□□□ -1.48
NHLRC3-205ENST00000485407 SNX32Q86XE0 403 aa5.78□□□□□ -1.48
NHLRC3-205ENST00000485407 CBWD2Q8IUF1 395 aa5.78□□□□□ -1.48
NHLRC3-205ENST00000485407 ZC3H3Q8IXZ2 948 aaKnown RBP5.78□□□□□ -1.48
NHLRC3-205ENST00000485407 KIAA2013Q8IYS2 634 aa5.78□□□□□ -1.48
NHLRC3-205ENST00000485407 LILRA2Q8N149 483 aa5.78□□□□□ -1.48
NHLRC3-205ENST00000485407 LRRC52Q8N7C0 313 aa5.78□□□□□ -1.48
NHLRC3-205ENST00000485407 MLKLQ8NB16 471 aa5.78□□□□□ -1.48
NHLRC3-205ENST00000485407 HDAC7Q8WUI4 952 aa5.78□□□□□ -1.48
NHLRC3-205ENST00000485407 RSC1A1Q92681 617 aa5.78□□□□□ -1.48
NHLRC3-205ENST00000485407 SAAL1Q96ER3 474 aa5.78□□□□□ -1.48
NHLRC3-205ENST00000485407 ANKRD36BP1Q96IX9 119 aa5.78□□□□□ -1.48
NHLRC3-205ENST00000485407 ZSWIM3Q96MP5 696 aa5.78□□□□□ -1.48
NHLRC3-205ENST00000485407 ZNF560Q96MR9 790 aa5.78□□□□□ -1.48
NHLRC3-205ENST00000485407 TSG101Q99816 390 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms