RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 FASTKD3Q14CZ7 662 aaKnown RBP7.01□□□□□ -1.29
BRCA1-216ENST00000484087 TMED2Q15363 201 aa7.01□□□□□ -1.29
BRCA1-216ENST00000484087 MAP7D1Q3KQU3 841 aa7.01□□□□□ -1.29
BRCA1-216ENST00000484087 POM121L1PQ3SYA9 428 aa7.01□□□□□ -1.29
BRCA1-216ENST00000484087 TNFAIP8L3Q5GJ75 292 aa7.01□□□□□ -1.29
BRCA1-216ENST00000484087 PITRM1Q5JRX3 1037 aa7.01□□□□□ -1.29
BRCA1-216ENST00000484087 ARTNQ5T4W7 220 aa7.01□□□□□ -1.29
BRCA1-216ENST00000484087 FAXCQ5TGI0 409 aa7.01□□□□□ -1.29
BRCA1-216ENST00000484087 CXorf57Q6NSI4 855 aaKnown RBP7.01□□□□□ -1.29
BRCA1-216ENST00000484087 LRRC8BQ6P9F7 803 aa7.01□□□□□ -1.29
BRCA1-216ENST00000484087 SERPINA13PQ6UXR4 307 aa7.01□□□□□ -1.29
BRCA1-216ENST00000484087 EXOC3L1Q86VI1 746 aa7.01□□□□□ -1.29
BRCA1-216ENST00000484087 CAMKK1Q8N5S9 505 aa7.01□□□□□ -1.29
BRCA1-216ENST00000484087 NETO2Q8NC67 525 aa7.01□□□□□ -1.29
BRCA1-216ENST00000484087 BCAS4Q8TDM0 211 aa7.01□□□□□ -1.29
BRCA1-216ENST00000484087 FBF1Q8TES7 1133 aa7.01□□□□□ -1.29
BRCA1-216ENST00000484087 NSMCE1Q8WV22 266 aa7.01□□□□□ -1.29
BRCA1-216ENST00000484087 CENPTQ96BT3 561 aa7.01□□□□□ -1.29
BRCA1-216ENST00000484087 CFAP36Q96G28 342 aa7.01□□□□□ -1.29
BRCA1-216ENST00000484087 BTN2A3PQ96KV6 586 aa7.01□□□□□ -1.29
BRCA1-216ENST00000484087 MRGPRX1Q96LB2 322 aa7.01□□□□□ -1.29
BRCA1-216ENST00000484087 RPRD1AQ96P16 312 aaPredicted RBP7.01□□□□□ -1.29
BRCA1-216ENST00000484087 SMC6Q96SB8 1091 aa7.01□□□□□ -1.29
BRCA1-216ENST00000484087 EPN3Q9H201 632 aa7.01□□□□□ -1.29
BRCA1-216ENST00000484087 ACSS3Q9H6R3 686 aa7.01□□□□□ -1.29
BRCA1-216ENST00000484087 POLMQ9NP87 494 aaPredicted RBP7.01□□□□□ -1.29
BRCA1-216ENST00000484087 KCNK9Q9NPC2 374 aa7.01□□□□□ -1.29
BRCA1-216ENST00000484087 SEMA4GQ9NTN9 838 aa7.01□□□□□ -1.29
BRCA1-216ENST00000484087 TMEM74BQ9NUR3 256 aa7.01□□□□□ -1.29
BRCA1-216ENST00000484087 INTS9Q9NV88 658 aaKnown RBP7.01□□□□□ -1.29
BRCA1-216ENST00000484087 NKIRAS1Q9NYS0 192 aa7.01□□□□□ -1.29
BRCA1-216ENST00000484087 THAP10Q9P2Z0 257 aaPredicted RBP7.01□□□□□ -1.29
BRCA1-216ENST00000484087 ZC3H7BQ9UGR2 993 aaKnown RBP7.01□□□□□ -1.29
BRCA1-216ENST00000484087 TBK1Q9UHD2 729 aa7.01□□□□□ -1.29
BRCA1-216ENST00000484087 RSPH14Q9UHP6 348 aa7.01□□□□□ -1.29
BRCA1-216ENST00000484087 GMEB2Q9UKD1 530 aa7.01□□□□□ -1.29
BRCA1-216ENST00000484087 RAB23Q9ULC3 237 aa7.01□□□□□ -1.29
BRCA1-216ENST00000484087 STARD13Q9Y3M8 1113 aa7.01□□□□□ -1.29
BRCA1-216ENST00000484087 MFHAS1Q9Y4C4 1052 aa7.01□□□□□ -1.29
BRCA1-216ENST00000484087 TEX264Q9Y6I9 313 aa7.01□□□□□ -1.29
BRCA1-216ENST00000484087 ASPMQ8IZT6 3477 aa7.01□□□□□ -1.29
BRCA1-216ENST00000484087 IGHV1OR15-9A0A0B4J2B8 117 aa7□□□□□ -1.29
BRCA1-216ENST00000484087 SDR42E2A6NKP2 422 aa7□□□□□ -1.29
BRCA1-216ENST00000484087 KCNK1O00180 336 aa7□□□□□ -1.29
BRCA1-216ENST00000484087 PLK4O00444 970 aa7□□□□□ -1.29
BRCA1-216ENST00000484087 NDUFAB1O14561 156 aa7□□□□□ -1.29
BRCA1-216ENST00000484087 SNAP91O60641 907 aa7□□□□□ -1.29
BRCA1-216ENST00000484087 EPN2O95208 641 aa7□□□□□ -1.29
BRCA1-216ENST00000484087 BRAFP15056 766 aa7□□□□□ -1.29
BRCA1-216ENST00000484087 RHOQP17081 205 aa7□□□□□ -1.29
BRCA1-216ENST00000484087 ITPKAP23677 461 aa7□□□□□ -1.29
BRCA1-216ENST00000484087 PTPN3P26045 913 aa7□□□□□ -1.29
BRCA1-216ENST00000484087 MAOBP27338 520 aa7□□□□□ -1.29
BRCA1-216ENST00000484087 SSTR1P30872 391 aa7□□□□□ -1.29
BRCA1-216ENST00000484087 HOXA6P31267 233 aa7□□□□□ -1.29
BRCA1-216ENST00000484087 MPLP40238 635 aa7□□□□□ -1.29
BRCA1-216ENST00000484087 PI4KAP42356 2102 aa7□□□□□ -1.29
BRCA1-216ENST00000484087 GPX6P59796 221 aa7□□□□□ -1.29
BRCA1-216ENST00000484087 WASHC5Q12768 1159 aa7□□□□□ -1.29
BRCA1-216ENST00000484087 SEPT7Q16181 437 aaKnown RBP7□□□□□ -1.29
BRCA1-216ENST00000484087 ZSCAN26Q16670 478 aa7□□□□□ -1.29
BRCA1-216ENST00000484087 PLEKHG6Q3KR16 790 aa7□□□□□ -1.29
BRCA1-216ENST00000484087 MSS51Q4VC12 460 aa7□□□□□ -1.29
BRCA1-216ENST00000484087 TEX44Q53QW1 395 aa7□□□□□ -1.29
BRCA1-216ENST00000484087 SYCP2LQ5T4T6 812 aa7□□□□□ -1.29
BRCA1-216ENST00000484087 UBAP2Q5T6F2 1119 aaKnown RBP7□□□□□ -1.29
BRCA1-216ENST00000484087 PMS2CLQ68D20 193 aa7□□□□□ -1.29
BRCA1-216ENST00000484087 RNF43Q68DV7 783 aa7□□□□□ -1.29
BRCA1-216ENST00000484087 TTC19Q6DKK2 380 aaPredicted RBP7□□□□□ -1.29
BRCA1-216ENST00000484087 LAIR1Q6GTX8 287 aa7□□□□□ -1.29
BRCA1-216ENST00000484087 CASC4Q6P4E1 433 aa7□□□□□ -1.29
BRCA1-216ENST00000484087 LINC00523Q86TU6 105 aa7□□□□□ -1.29
BRCA1-216ENST00000484087 SLC41A1Q8IVJ1 513 aa7□□□□□ -1.29
BRCA1-216ENST00000484087 SRRM1Q8IYB3 904 aaKnown RBP7□□□□□ -1.29
BRCA1-216ENST00000484087 ZNF683Q8IZ20 524 aa7□□□□□ -1.29
BRCA1-216ENST00000484087 AHI1Q8N157 1196 aa7□□□□□ -1.29
BRCA1-216ENST00000484087 ZNF567Q8N184 647 aa7□□□□□ -1.29
BRCA1-216ENST00000484087 DDX51Q8N8A6 666 aaKnown RBP eCLIP7□□□□□ -1.29
BRCA1-216ENST00000484087 RTL3Q8N8U3 475 aaKnown RBP7□□□□□ -1.29
BRCA1-216ENST00000484087 OR2I1PQ8NGU4 316 aa7□□□□□ -1.29
BRCA1-216ENST00000484087 LRRN4Q8WUT4 740 aa7□□□□□ -1.29
BRCA1-216ENST00000484087 CDKL2Q92772 493 aa7□□□□□ -1.29
BRCA1-216ENST00000484087 CELF6Q96J87 481 aaKnown RBP7□□□□□ -1.29
BRCA1-216ENST00000484087 MRGPRX3Q96LB0 322 aa7□□□□□ -1.29
BRCA1-216ENST00000484087 TSGA13Q96PP4 275 aa7□□□□□ -1.29
BRCA1-216ENST00000484087 PAFAH2Q99487 392 aa7□□□□□ -1.29
BRCA1-216ENST00000484087 EBNA1BP2Q99848 306 aaKnown RBP7□□□□□ -1.29
BRCA1-216ENST00000484087 ZYG11BQ9C0D3 744 aa7□□□□□ -1.29
BRCA1-216ENST00000484087 ALG2Q9H553 416 aa7□□□□□ -1.29
BRCA1-216ENST00000484087 PPANQ9NQ55 473 aaKnown RBP7□□□□□ -1.29
BRCA1-216ENST00000484087 NDFIP2Q9NV92 336 aa7□□□□□ -1.29
BRCA1-216ENST00000484087 HAUS2Q9NVX0 235 aa7□□□□□ -1.29
BRCA1-216ENST00000484087 BFARQ9NZS9 450 aa7□□□□□ -1.29
BRCA1-216ENST00000484087 SAMD15Q9P1V8 674 aa7□□□□□ -1.29
BRCA1-216ENST00000484087 PPARGC1AQ9UBK2 798 aaKnown RBP7□□□□□ -1.29
BRCA1-216ENST00000484087 SERGEFQ9UGK8 458 aa7□□□□□ -1.29
BRCA1-216ENST00000484087 SLCO3A1Q9UIG8 710 aa7□□□□□ -1.29
BRCA1-216ENST00000484087 AAR2Q9Y312 384 aaKnown RBP7□□□□□ -1.29
BRCA1-216ENST00000484087 MAD1L1Q9Y6D9 718 aa7□□□□□ -1.29
BRCA1-216ENST00000484087 CHD5Q8TDI0 1954 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms