RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 OSCP1Q8WVF1 389 aa26.34■■□□□ 1.81
SHOX2-204ENST00000483851 PITPNM3Q9BZ71 974 aa26.34■■□□□ 1.81
SHOX2-204ENST00000483851 GDE1Q9NZC3 331 aa26.34■■□□□ 1.81
SHOX2-204ENST00000483851 ANKRD6Q9Y2G4 727 aa26.34■■□□□ 1.81
SHOX2-204ENST00000483851 ARL5AQ9Y689 179 aa26.34■■□□□ 1.81
SHOX2-204ENST00000483851 WNT6Q9Y6F9 365 aa26.34■■□□□ 1.81
SHOX2-204ENST00000483851 LAMA2P24043 3122 aaKnown RBP26.34■■□□□ 1.81
SHOX2-204ENST00000483851 H0YHG0 523 aa26.34■■□□□ 1.81
SHOX2-204ENST00000483851 KLF11O14901 512 aa26.34■■□□□ 1.81
SHOX2-204ENST00000483851 SRCP12931 536 aa26.34■■□□□ 1.81
SHOX2-204ENST00000483851 FSHRP23945 695 aa26.34■■□□□ 1.81
SHOX2-204ENST00000483851 ZNF140P52738 457 aaPredicted RBP26.34■■□□□ 1.81
SHOX2-204ENST00000483851 GRM3Q14832 879 aa26.34■■□□□ 1.81
SHOX2-204ENST00000483851 ARMC12Q5T9G4 340 aa26.34■■□□□ 1.81
SHOX2-204ENST00000483851 GLT6D1Q7Z4J2 308 aa26.34■■□□□ 1.81
SHOX2-204ENST00000483851 GPR149Q86SP6 731 aa26.34■■□□□ 1.81
SHOX2-204ENST00000483851 CILP2Q8IUL8 1156 aa26.34■■□□□ 1.81
SHOX2-204ENST00000483851 OR2AP1Q8NGE2 309 aa26.34■■□□□ 1.81
SHOX2-204ENST00000483851 OR6P1Q8NGX9 317 aa26.34■■□□□ 1.81
SHOX2-204ENST00000483851 RAB3IL1Q8TBN0 382 aa26.34■■□□□ 1.81
SHOX2-204ENST00000483851 FBXO10Q9UK96 956 aa26.34■■□□□ 1.81
SHOX2-204ENST00000483851 CHD9Q3L8U1 2897 aa26.34■■□□□ 1.81
SHOX2-204ENST00000483851 C2orf16Q68DN1 1984 aa26.33■■□□□ 1.81
SHOX2-204ENST00000483851 HTRA2O43464 458 aaPredicted RBP26.33■■□□□ 1.81
SHOX2-204ENST00000483851 GSRP00390 522 aa26.33■■□□□ 1.81
SHOX2-204ENST00000483851 BCL2L1Q07817 233 aa26.33■■□□□ 1.81
SHOX2-204ENST00000483851 ATXN7L2Q5T6C5 722 aaPredicted RBP26.33■■□□□ 1.81
SHOX2-204ENST00000483851 NPAS3Q8IXF0 933 aa26.33■■□□□ 1.81
SHOX2-204ENST00000483851 AHI1Q8N157 1196 aa26.33■■□□□ 1.81
SHOX2-204ENST00000483851 TUBGCP5Q96RT8 1024 aa26.33■■□□□ 1.81
SHOX2-204ENST00000483851 ATP13A3Q9H7F0 1226 aa26.33■■□□□ 1.81
SHOX2-204ENST00000483851 TRPV4Q9HBA0 871 aa26.33■■□□□ 1.81
SHOX2-204ENST00000483851 SLC40A1Q9NP59 571 aa26.33■■□□□ 1.81
SHOX2-204ENST00000483851 SPO11Q9Y5K1 396 aa26.33■■□□□ 1.81
SHOX2-204ENST00000483851 CHD7Q9P2D1 2997 aa26.33■■□□□ 1.81
SHOX2-204ENST00000483851 MYOFQ9NZM1 2061 aa26.32■■□□□ 1.8
SHOX2-204ENST00000483851 ZNF821O75541 412 aaPredicted RBP26.32■■□□□ 1.8
SHOX2-204ENST00000483851 PGLSO95336 258 aa26.32■■□□□ 1.8
SHOX2-204ENST00000483851 COL6A2P12110 1019 aa26.32■■□□□ 1.8
SHOX2-204ENST00000483851 LPOP22079 712 aaPredicted RBP26.32■■□□□ 1.8
SHOX2-204ENST00000483851 VASPP50552 380 aaPredicted RBP26.32■■□□□ 1.8
SHOX2-204ENST00000483851 ARSDP51689 593 aa26.32■■□□□ 1.8
SHOX2-204ENST00000483851 CLCN5P51795 746 aa26.32■■□□□ 1.8
SHOX2-204ENST00000483851 ASTLQ6HA08 431 aaPredicted RBP26.32■■□□□ 1.8
SHOX2-204ENST00000483851 MRNIPQ6NTE8 343 aa26.32■■□□□ 1.8
SHOX2-204ENST00000483851 PLPP6Q8IY26 295 aa26.32■■□□□ 1.8
SHOX2-204ENST00000483851 PCDH20Q8N6Y1 951 aaKnown RBP26.32■■□□□ 1.8
SHOX2-204ENST00000483851 SMARCD2Q92925 531 aa26.32■■□□□ 1.8
SHOX2-204ENST00000483851 DNAJC1Q96KC8 554 aaKnown RBP26.32■■□□□ 1.8
SHOX2-204ENST00000483851 TM6SF2Q9BZW4 377 aa26.32■■□□□ 1.8
SHOX2-204ENST00000483851 MANSC1Q9H8J5 431 aa26.32■■□□□ 1.8
SHOX2-204ENST00000483851 MAGEE1Q9HCI5 957 aa26.32■■□□□ 1.8
SHOX2-204ENST00000483851 DUS2Q9NX74 493 aaKnown RBP26.32■■□□□ 1.8
SHOX2-204ENST00000483851 CORO1CQ9ULV4 474 aaPredicted RBP26.32■■□□□ 1.8
SHOX2-204ENST00000483851 A0A096LPK6 155 aa26.32■■□□□ 1.8
SHOX2-204ENST00000483851 EPOPA6NHQ4 379 aa26.32■■□□□ 1.8
SHOX2-204ENST00000483851 HOXC11O43248 304 aaPredicted RBP26.32■■□□□ 1.8
SHOX2-204ENST00000483851 EDF1O60869 148 aaKnown RBP26.32■■□□□ 1.8
SHOX2-204ENST00000483851 GLP2RO95838 553 aa26.32■■□□□ 1.8
SHOX2-204ENST00000483851 OGNP20774 298 aaKnown RBP26.32■■□□□ 1.8
SHOX2-204ENST00000483851 MPP1Q00013 466 aa26.32■■□□□ 1.8
SHOX2-204ENST00000483851 POU4F1Q01851 419 aa26.32■■□□□ 1.8
SHOX2-204ENST00000483851 CCDC153Q494R4 210 aa26.32■■□□□ 1.8
SHOX2-204ENST00000483851 CLEC14AQ86T13 490 aa26.32■■□□□ 1.8
SHOX2-204ENST00000483851 ATXN7L3BQ96GX2 97 aa26.32■■□□□ 1.8
SHOX2-204ENST00000483851 MYO19Q96H55 970 aa26.32■■□□□ 1.8
SHOX2-204ENST00000483851 CDKN2AIPNLQ96HQ2 116 aa26.32■■□□□ 1.8
SHOX2-204ENST00000483851 TBATAQ96M53 351 aa26.32■■□□□ 1.8
SHOX2-204ENST00000483851 ASB16Q96NS5 453 aa26.32■■□□□ 1.8
SHOX2-204ENST00000483851 C12orf65Q9H3J6 166 aaKnown RBP26.32■■□□□ 1.8
SHOX2-204ENST00000483851 CAMSAP3Q9P1Y5 1249 aaPredicted RBP26.32■■□□□ 1.8
SHOX2-204ENST00000483851 KCTD3Q9Y597 815 aa26.32■■□□□ 1.8
SHOX2-204ENST00000483851 CCDC85CA6NKD9 419 aa26.31■■□□□ 1.8
SHOX2-204ENST00000483851 TRAFD1O14545 582 aaPredicted RBP26.31■■□□□ 1.8
SHOX2-204ENST00000483851 UBOX5O94941 541 aa26.31■■□□□ 1.8
SHOX2-204ENST00000483851 ADH1CP00326 375 aa26.31■■□□□ 1.8
SHOX2-204ENST00000483851 C2P06681 752 aa26.31■■□□□ 1.8
SHOX2-204ENST00000483851 HOXB8P17481 243 aaPredicted RBP26.31■■□□□ 1.8
SHOX2-204ENST00000483851 CRABP2P29373 138 aa26.31■■□□□ 1.8
SHOX2-204ENST00000483851 HNRNPH1P31943 449 aaKnown RBP26.31■■□□□ 1.8
SHOX2-204ENST00000483851 ECT2LQ008S8 904 aa26.31■■□□□ 1.8
SHOX2-204ENST00000483851 USP10Q14694 798 aaKnown RBP26.31■■□□□ 1.8
SHOX2-204ENST00000483851 DHCR24Q15392 516 aa26.31■■□□□ 1.8
SHOX2-204ENST00000483851 DGKKQ5KSL6 1271 aa26.31■■□□□ 1.8
SHOX2-204ENST00000483851 C22orf39Q6P5X5 142 aa26.31■■□□□ 1.8
SHOX2-204ENST00000483851 FAM47EQ6ZV65 393 aa26.31■■□□□ 1.8
SHOX2-204ENST00000483851 CCDC91Q7Z6B0 441 aa26.31■■□□□ 1.8
SHOX2-204ENST00000483851 MDGA1Q8NFP4 955 aa26.31■■□□□ 1.8
SHOX2-204ENST00000483851 BPIFB1Q8TDL5 484 aa26.31■■□□□ 1.8
SHOX2-204ENST00000483851 RMDN2Q96LZ7 410 aa26.31■■□□□ 1.8
SHOX2-204ENST00000483851 TLK1Q9UKI8 766 aa26.31■■□□□ 1.8
SHOX2-204ENST00000483851 SLC39A10Q9ULF5 831 aa26.31■■□□□ 1.8
SHOX2-204ENST00000483851 PHTF1Q9UMS5 762 aa26.31■■□□□ 1.8
SHOX2-204ENST00000483851 PCDHB9Q9Y5E1 797 aa26.31■■□□□ 1.8
SHOX2-204ENST00000483851 FAM95CA0A1B0GW59 222 aa26.3■■□□□ 1.8
SHOX2-204ENST00000483851 IL1BP01584 269 aa26.3■■□□□ 1.8
SHOX2-204ENST00000483851 PRKCGP05129 697 aa26.3■■□□□ 1.8
SHOX2-204ENST00000483851 BMP8BP34820 402 aa26.3■■□□□ 1.8
SHOX2-204ENST00000483851 EPHB1P54762 984 aa26.3■■□□□ 1.8
SHOX2-204ENST00000483851 TAF1BQ53T94 588 aaPredicted RBP26.3■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms