RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 PRKCIP41743 596 aa18.11■□□□□ 0.49
ATG4B-221ENST00000483778 HCAR3P49019 387 aa18.11■□□□□ 0.49
ATG4B-221ENST00000483778 SCNN1BP51168 640 aa18.11■□□□□ 0.49
ATG4B-221ENST00000483778 PCBP4P57723 403 aaKnown RBP18.11■□□□□ 0.49
ATG4B-221ENST00000483778 CCL7P80098 99 aa18.11■□□□□ 0.49
ATG4B-221ENST00000483778 IL10RBQ08334 325 aa18.11■□□□□ 0.49
ATG4B-221ENST00000483778 GRM3Q14832 879 aa18.11■□□□□ 0.49
ATG4B-221ENST00000483778 IQCB1Q15051 598 aa18.11■□□□□ 0.49
ATG4B-221ENST00000483778 ERAP2Q6P179 960 aa18.11■□□□□ 0.49
ATG4B-221ENST00000483778 FOXR1Q6PIV2 292 aa18.11■□□□□ 0.49
ATG4B-221ENST00000483778 RBM44Q6ZP01 1051 aaKnown RBP18.11■□□□□ 0.49
ATG4B-221ENST00000483778 GPR155Q7Z3F1 870 aa18.11■□□□□ 0.49
ATG4B-221ENST00000483778 ZNF248Q8NDW4 579 aa18.11■□□□□ 0.49
ATG4B-221ENST00000483778 ZNF653Q96CK0 615 aa18.11■□□□□ 0.49
ATG4B-221ENST00000483778 BPIFA3Q9BQP9 254 aa18.11■□□□□ 0.49
ATG4B-221ENST00000483778 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.11■□□□□ 0.49
ATG4B-221ENST00000483778 CINPQ9BW66 212 aaPredicted RBP18.11■□□□□ 0.49
ATG4B-221ENST00000483778 ATP13A3Q9H7F0 1226 aa18.11■□□□□ 0.49
ATG4B-221ENST00000483778 GPR34Q9UPC5 381 aa18.11■□□□□ 0.49
ATG4B-221ENST00000483778 A0A0U1RQS6 177 aa18.1■□□□□ 0.49
ATG4B-221ENST00000483778 A0A1B0GTH6 734 aa18.1■□□□□ 0.49
ATG4B-221ENST00000483778 TMEM110-MUSTN1A8MSY1 372 aa18.1■□□□□ 0.49
ATG4B-221ENST00000483778 RASGRP1O95267 797 aa18.1■□□□□ 0.49
ATG4B-221ENST00000483778 MBD3O95983 291 aa18.1■□□□□ 0.49
ATG4B-221ENST00000483778 RPIAP49247 311 aa18.1■□□□□ 0.49
ATG4B-221ENST00000483778 ERVPABLB-1P60509 514 aa18.1■□□□□ 0.49
ATG4B-221ENST00000483778 BCL2L1Q07817 233 aa18.1■□□□□ 0.49
ATG4B-221ENST00000483778 NSUN2Q08J23 767 aaKnown RBP eCLIP18.1■□□□□ 0.49
ATG4B-221ENST00000483778 KLHL30Q0D2K2 578 aa18.1■□□□□ 0.49
ATG4B-221ENST00000483778 NR1I3Q14994 352 aa18.1■□□□□ 0.49
ATG4B-221ENST00000483778 SMTNL2Q2TAL5 461 aa18.1■□□□□ 0.49
ATG4B-221ENST00000483778 CFAP58Q5T655 872 aa18.1■□□□□ 0.49
ATG4B-221ENST00000483778 LSMEM2Q8N112 164 aa18.1■□□□□ 0.49
ATG4B-221ENST00000483778 CCL4L1Q8NHW4 92 aa18.1■□□□□ 0.49
ATG4B-221ENST00000483778 TPCN2Q8NHX9 752 aa18.1■□□□□ 0.49
ATG4B-221ENST00000483778 FNIP1Q8TF40 1166 aa18.1■□□□□ 0.49
ATG4B-221ENST00000483778 GLMNQ92990 594 aa18.1■□□□□ 0.49
ATG4B-221ENST00000483778 CCDC74AQ96AQ1 378 aa18.1■□□□□ 0.49
ATG4B-221ENST00000483778 BTBD6Q96KE9 485 aa18.1■□□□□ 0.49
ATG4B-221ENST00000483778 WDR92Q96MX6 357 aa18.1■□□□□ 0.49
ATG4B-221ENST00000483778 ISCUQ9H1K1 167 aa18.1■□□□□ 0.49
ATG4B-221ENST00000483778 SP110Q9HB58 689 aa18.1■□□□□ 0.49
ATG4B-221ENST00000483778 FGF22Q9HCT0 170 aa18.1■□□□□ 0.49
ATG4B-221ENST00000483778 KLQ9UEF7 1012 aa18.1■□□□□ 0.49
ATG4B-221ENST00000483778 DOLKQ9UPQ8 538 aa18.1■□□□□ 0.49
ATG4B-221ENST00000483778 PCDHGC4Q9Y5F7 938 aa18.1■□□□□ 0.49
ATG4B-221ENST00000483778 AHCTF1Q8WYP5 2266 aa18.1■□□□□ 0.49
ATG4B-221ENST00000483778 ZFC3H1O60293 1989 aaKnown RBP18.1■□□□□ 0.49
ATG4B-221ENST00000483778 A0A1W2PQC6 194 aa18.09■□□□□ 0.49
ATG4B-221ENST00000483778 A0A1W2PQM1 296 aa18.09■□□□□ 0.49
ATG4B-221ENST00000483778 EIF3CLB5ME19 914 aaKnown RBP18.09■□□□□ 0.49
ATG4B-221ENST00000483778 GOLGA6L22H0YM25 854 aa18.09■□□□□ 0.49
ATG4B-221ENST00000483778 KLK10O43240 276 aa18.09■□□□□ 0.49
ATG4B-221ENST00000483778 FUCA1P04066 466 aa18.09■□□□□ 0.49
ATG4B-221ENST00000483778 SERPINA4P29622 427 aa18.09■□□□□ 0.49
ATG4B-221ENST00000483778 SKOR1P84550 965 aa18.09■□□□□ 0.49
ATG4B-221ENST00000483778 MTM1Q13496 603 aa18.09■□□□□ 0.49
ATG4B-221ENST00000483778 ELOCQ15369 112 aa18.09■□□□□ 0.49
ATG4B-221ENST00000483778 ARHGAP40Q5TG30 622 aa18.09■□□□□ 0.49
ATG4B-221ENST00000483778 HGSNATQ68CP4 663 aa18.09■□□□□ 0.49
ATG4B-221ENST00000483778 ESRP1Q6NXG1 681 aaKnown RBP18.09■□□□□ 0.49
ATG4B-221ENST00000483778 LVRNQ6Q4G3 990 aa18.09■□□□□ 0.49
ATG4B-221ENST00000483778 DPPA4Q7L190 304 aa18.09■□□□□ 0.49
ATG4B-221ENST00000483778 POLNQ7Z5Q5 900 aa18.09■□□□□ 0.49
ATG4B-221ENST00000483778 FSTL5Q8N475 847 aaPredicted RBP18.09■□□□□ 0.49
ATG4B-221ENST00000483778 NAT6Q93015 286 aa18.09■□□□□ 0.49
ATG4B-221ENST00000483778 SMIM14Q96QK8 99 aa18.09■□□□□ 0.49
ATG4B-221ENST00000483778 PSKH2Q96QS6 385 aa18.09■□□□□ 0.49
ATG4B-221ENST00000483778 RBM15Q96T37 977 aaKnown RBP eCLIP18.09■□□□□ 0.49
ATG4B-221ENST00000483778 EIF3CQ99613 913 aaKnown RBP18.09■□□□□ 0.49
ATG4B-221ENST00000483778 FUCA2Q9BTY2 467 aa18.09■□□□□ 0.49
ATG4B-221ENST00000483778 FOXP3Q9BZS1 431 aa18.09■□□□□ 0.49
ATG4B-221ENST00000483778 NAT10Q9H0A0 1025 aaKnown RBP18.09■□□□□ 0.49
ATG4B-221ENST00000483778 TMEM168Q9H0V1 697 aa18.09■□□□□ 0.49
ATG4B-221ENST00000483778 SYNDIG1Q9H7V2 258 aa18.09■□□□□ 0.49
ATG4B-221ENST00000483778 ZWILCHQ9H900 591 aa18.09■□□□□ 0.49
ATG4B-221ENST00000483778 EIF4E1BA6NMX2 242 aaKnown RBP18.08■□□□□ 0.48
ATG4B-221ENST00000483778 SMTNL1A8MU46 457 aa18.08■□□□□ 0.48
ATG4B-221ENST00000483778 CDRT15L2A8MXV6 281 aa18.08■□□□□ 0.48
ATG4B-221ENST00000483778 AGRPO00253 132 aa18.08■□□□□ 0.48
ATG4B-221ENST00000483778 TNFP01375 233 aa18.08■□□□□ 0.48
ATG4B-221ENST00000483778 RARAP10276 462 aa18.08■□□□□ 0.48
ATG4B-221ENST00000483778 TRIM23P36406 574 aa18.08■□□□□ 0.48
ATG4B-221ENST00000483778 ZNF165P49910 485 aa18.08■□□□□ 0.48
ATG4B-221ENST00000483778 BLKP51451 505 aa18.08■□□□□ 0.48
ATG4B-221ENST00000483778 LBRQ14739 615 aaKnown RBP18.08■□□□□ 0.48
ATG4B-221ENST00000483778 PPP1R2P3Q6NXS1 205 aa18.08■□□□□ 0.48
ATG4B-221ENST00000483778 CAVIN1Q6NZI2 390 aaKnown RBP18.08■□□□□ 0.48
ATG4B-221ENST00000483778 IGF2-ASQ6U949 168 aa18.08■□□□□ 0.48
ATG4B-221ENST00000483778 CPNE8Q86YQ8 564 aa18.08■□□□□ 0.48
ATG4B-221ENST00000483778 PSTKQ8IV42 348 aaKnown RBP18.08■□□□□ 0.48
ATG4B-221ENST00000483778 SDR16C5Q8N3Y7 309 aa18.08■□□□□ 0.48
ATG4B-221ENST00000483778 ARL10Q8N8L6 244 aa18.08■□□□□ 0.48
ATG4B-221ENST00000483778 PTCD2Q8WV60 388 aaKnown RBP18.08■□□□□ 0.48
ATG4B-221ENST00000483778 KCNE4Q8WWG9 221 aa18.08■□□□□ 0.48
ATG4B-221ENST00000483778 HSPH1Q92598 858 aa18.08■□□□□ 0.48
ATG4B-221ENST00000483778 COQ10AQ96MF6 247 aa18.08■□□□□ 0.48
ATG4B-221ENST00000483778 NOD2Q9HC29 1040 aa18.08■□□□□ 0.48
ATG4B-221ENST00000483778 DONSONQ9NYP3 566 aa18.08■□□□□ 0.48
ATG4B-221ENST00000483778 B4GALT6Q9UBX8 382 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms