RNA–Protein interactions for RNA: ENST00000483503.5

SND1-210, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 5

Gene SND1, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-210ENST00000483503 LPOP22079 712 aaPredicted RBP11.97□□□□□ -0.49
SND1-210ENST00000483503 ATP5F1P24539 256 aaPredicted RBP11.97□□□□□ -0.49
SND1-210ENST00000483503 TARSP26639 723 aaKnown RBP11.97□□□□□ -0.49
SND1-210ENST00000483503 PMLP29590 882 aa11.97□□□□□ -0.49
SND1-210ENST00000483503 AVPR1AP37288 418 aa11.97□□□□□ -0.49
SND1-210ENST00000483503 CSNK1DP48730 415 aa11.97□□□□□ -0.49
SND1-210ENST00000483503 RPL26P61254 145 aaKnown RBP11.97□□□□□ -0.49
SND1-210ENST00000483503 RHOAP61586 193 aa11.97□□□□□ -0.49
SND1-210ENST00000483503 SLC20A2Q08357 652 aa11.97□□□□□ -0.49
SND1-210ENST00000483503 PRKAA1Q13131 559 aa11.97□□□□□ -0.49
SND1-210ENST00000483503 RCN2Q14257 317 aa11.97□□□□□ -0.49
SND1-210ENST00000483503 GALNT3Q14435 633 aa11.97□□□□□ -0.49
SND1-210ENST00000483503 IHHQ14623 411 aa11.97□□□□□ -0.49
SND1-210ENST00000483503 ACAP2Q15057 778 aa11.97□□□□□ -0.49
SND1-210ENST00000483503 SNCBQ16143 134 aa11.97□□□□□ -0.49
SND1-210ENST00000483503 PPM1LQ5SGD2 360 aa11.97□□□□□ -0.49
SND1-210ENST00000483503 HECTD2Q5U5R9 776 aa11.97□□□□□ -0.49
SND1-210ENST00000483503 CES4AQ5XG92 561 aa11.97□□□□□ -0.49
SND1-210ENST00000483503 NCEH1Q6PIU2 408 aa11.97□□□□□ -0.49
SND1-210ENST00000483503 CNSTQ6PJW8 725 aa11.97□□□□□ -0.49
SND1-210ENST00000483503 GLT6D1Q7Z4J2 308 aa11.97□□□□□ -0.49
SND1-210ENST00000483503 PACS2Q86VP3 889 aa11.97□□□□□ -0.49
SND1-210ENST00000483503 TMC8Q8IU68 726 aa11.97□□□□□ -0.49
SND1-210ENST00000483503 SLC22A9Q8IVM8 553 aa11.97□□□□□ -0.49
SND1-210ENST00000483503 CEP97Q8IW35 865 aa11.97□□□□□ -0.49
SND1-210ENST00000483503 MFN1Q8IWA4 741 aa11.97□□□□□ -0.49
SND1-210ENST00000483503 CENPLQ8N0S6 344 aaPredicted RBP11.97□□□□□ -0.49
SND1-210ENST00000483503 ARHGAP24Q8N264 748 aa11.97□□□□□ -0.49
SND1-210ENST00000483503 FSTL5Q8N475 847 aaPredicted RBP11.97□□□□□ -0.49
SND1-210ENST00000483503 AFAP1L2Q8N4X5 818 aa11.97□□□□□ -0.49
SND1-210ENST00000483503 ZNF557Q8N988 423 aaPredicted RBP11.97□□□□□ -0.49
SND1-210ENST00000483503 TDRD5Q8NAT2 981 aaKnown RBP11.97□□□□□ -0.49
SND1-210ENST00000483503 KLHL23Q8NBE8 558 aa11.97□□□□□ -0.49
SND1-210ENST00000483503 ACVR1CQ8NER5 493 aa11.97□□□□□ -0.49
SND1-210ENST00000483503 PHOSPHO2Q8TCD6 241 aa11.97□□□□□ -0.49
SND1-210ENST00000483503 ADAMTS19Q8TE59 1207 aa11.97□□□□□ -0.49
SND1-210ENST00000483503 WBP2Q969T9 261 aa11.97□□□□□ -0.49
SND1-210ENST00000483503 ACDQ96AP0 544 aa11.97□□□□□ -0.49
SND1-210ENST00000483503 DNAJC1Q96KC8 554 aaKnown RBP11.97□□□□□ -0.49
SND1-210ENST00000483503 TBATAQ96M53 351 aa11.97□□□□□ -0.49
SND1-210ENST00000483503 CYP2S1Q96SQ9 504 aa11.97□□□□□ -0.49
SND1-210ENST00000483503 SORT1Q99523 831 aa11.97□□□□□ -0.49
SND1-210ENST00000483503 LRRC3Q9BY71 257 aa11.97□□□□□ -0.49
SND1-210ENST00000483503 DRC3Q9H069 523 aa11.97□□□□□ -0.49
SND1-210ENST00000483503 CDH19Q9H159 772 aa11.97□□□□□ -0.49
SND1-210ENST00000483503 GPAMQ9HCL2 828 aa11.97□□□□□ -0.49
SND1-210ENST00000483503 KIAA1522Q9P206 1035 aaPredicted RBP11.97□□□□□ -0.49
SND1-210ENST00000483503 VTI1BQ9UEU0 232 aa11.97□□□□□ -0.49
SND1-210ENST00000483503 RAP2CQ9Y3L5 183 aa11.97□□□□□ -0.49
SND1-210ENST00000483503 KIAA1671Q9BY89 1806 aa11.97□□□□□ -0.49
SND1-210ENST00000483503 CCDC162PA2VCL2 907 aa11.96□□□□□ -0.49
SND1-210ENST00000483503 LYPLA1O75608 230 aaPredicted RBP11.96□□□□□ -0.49
SND1-210ENST00000483503 T-ENOLP0DO92 83 aa11.96□□□□□ -0.49
SND1-210ENST00000483503 GLDCP23378 1020 aa11.96□□□□□ -0.49
SND1-210ENST00000483503 HNRNPH1P31943 449 aaKnown RBP11.96□□□□□ -0.49
SND1-210ENST00000483503 ARSDP51689 593 aa11.96□□□□□ -0.49
SND1-210ENST00000483503 MNAT1P51948 309 aa11.96□□□□□ -0.49
SND1-210ENST00000483503 ZNF140P52738 457 aaPredicted RBP11.96□□□□□ -0.49
SND1-210ENST00000483503 KCNJ2P63252 427 aa11.96□□□□□ -0.49
SND1-210ENST00000483503 ARF5P84085 180 aa11.96□□□□□ -0.49
SND1-210ENST00000483503 CYP4F8P98187 520 aa11.96□□□□□ -0.49
SND1-210ENST00000483503 UBE3AQ05086 875 aa11.96□□□□□ -0.49
SND1-210ENST00000483503 CTC1Q2NKJ3 1217 aa11.96□□□□□ -0.49
SND1-210ENST00000483503 TYSND1Q2T9J0 566 aa11.96□□□□□ -0.49
SND1-210ENST00000483503 ARHGAP15Q53QZ3 475 aa11.96□□□□□ -0.49
SND1-210ENST00000483503 FSCBQ5H9T9 825 aa11.96□□□□□ -0.49
SND1-210ENST00000483503 AARS2Q5JTZ9 985 aaKnown RBP11.96□□□□□ -0.49
SND1-210ENST00000483503 GAREM2Q75VX8 874 aa11.96□□□□□ -0.49
SND1-210ENST00000483503 PIWIL4Q7Z3Z4 852 aaKnown RBP11.96□□□□□ -0.49
SND1-210ENST00000483503 LEMD2Q8NC56 503 aa11.96□□□□□ -0.49
SND1-210ENST00000483503 LPCAT1Q8NF37 534 aa11.96□□□□□ -0.49
SND1-210ENST00000483503 SP7Q8TDD2 431 aaPredicted RBP11.96□□□□□ -0.49
SND1-210ENST00000483503 DDI1Q8WTU0 396 aa11.96□□□□□ -0.49
SND1-210ENST00000483503 NXNL1Q96CM4 212 aa11.96□□□□□ -0.49
SND1-210ENST00000483503 PTCD3Q96EY7 689 aaKnown RBP11.96□□□□□ -0.49
SND1-210ENST00000483503 CDKN2AIPNLQ96HQ2 116 aa11.96□□□□□ -0.49
SND1-210ENST00000483503 GPR78Q96P69 363 aa11.96□□□□□ -0.49
SND1-210ENST00000483503 SLC22A12Q96S37 553 aa11.96□□□□□ -0.49
SND1-210ENST00000483503 C19orf43Q9BQ61 176 aa11.96□□□□□ -0.49
SND1-210ENST00000483503 GATA5Q9BWX5 397 aaPredicted RBP11.96□□□□□ -0.49
SND1-210ENST00000483503 C20orf27Q9GZN8 174 aa11.96□□□□□ -0.49
SND1-210ENST00000483503 CCDC68Q9H2F9 335 aa11.96□□□□□ -0.49
SND1-210ENST00000483503 MTIF3Q9H2K0 278 aaKnown RBP11.96□□□□□ -0.49
SND1-210ENST00000483503 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.96□□□□□ -0.494e-6■□□□□ 9.5
SND1-210ENST00000483503 CFAP97Q9P2B7 532 aa11.96□□□□□ -0.49
SND1-210ENST00000483503 CPSF2Q9P2I0 782 aaKnown RBP11.96□□□□□ -0.49
SND1-210ENST00000483503 DNMT3BQ9UBC3 853 aaKnown RBP11.96□□□□□ -0.49
SND1-210ENST00000483503 LHX3Q9UBR4 397 aa11.96□□□□□ -0.49
SND1-210ENST00000483503 MARCOQ9UEW3 520 aaPredicted RBP11.96□□□□□ -0.49
SND1-210ENST00000483503 ZMYM5Q9UJ78 669 aa11.96□□□□□ -0.49
SND1-210ENST00000483503 OR51B4Q9Y5P0 310 aa11.96□□□□□ -0.49
SND1-210ENST00000483503 ARL5AQ9Y689 179 aa11.96□□□□□ -0.49
SND1-210ENST00000483503 DNAH12Q6ZR08 3092 aa11.96□□□□□ -0.5
SND1-210ENST00000483503 CCDC189A1A4V9 331 aa11.95□□□□□ -0.5
SND1-210ENST00000483503 GOLGA8CPA6NN73 597 aa11.95□□□□□ -0.5
SND1-210ENST00000483503 ANKRD66B4E2M5 251 aa11.95□□□□□ -0.5
SND1-210ENST00000483503 TARM1B6A8C7 271 aa11.95□□□□□ -0.5
SND1-210ENST00000483503 STX7O15400 261 aaKnown RBP11.95□□□□□ -0.5
SND1-210ENST00000483503 SNAP91O60641 907 aa11.95□□□□□ -0.5
SND1-210ENST00000483503 WFS1O76024 890 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms