RNA–Protein interactions for RNA: ENST00000482714.5

CCM2-215, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-215ENST00000482714 METAP1P53582 386 aa15.4■□□□□ 0.06
CCM2-215ENST00000482714 ADPRHP54922 357 aa15.4■□□□□ 0.06
CCM2-215ENST00000482714 TAS2R38P59533 333 aa15.4■□□□□ 0.06
CCM2-215ENST00000482714 RPS21P63220 83 aaKnown RBP15.4■□□□□ 0.06
CCM2-215ENST00000482714 KCNJ11Q14654 390 aa15.4■□□□□ 0.06
CCM2-215ENST00000482714 MORF4L2Q15014 288 aa15.4■□□□□ 0.06
CCM2-215ENST00000482714 POM121L1PQ3SYA9 428 aa15.4■□□□□ 0.06
CCM2-215ENST00000482714 KIAA1161Q6NSJ0 714 aa15.4■□□□□ 0.06
CCM2-215ENST00000482714 DPPA4Q7L190 304 aa15.4■□□□□ 0.06
CCM2-215ENST00000482714 LPCAT1Q8NF37 534 aa15.4■□□□□ 0.06
CCM2-215ENST00000482714 CPT1BQ92523 772 aa15.4■□□□□ 0.06
CCM2-215ENST00000482714 FOXJ1Q92949 421 aa15.4■□□□□ 0.06
CCM2-215ENST00000482714 TOE1Q96GM8 510 aaKnown RBP15.4■□□□□ 0.06
CCM2-215ENST00000482714 WHRNQ9P202 907 aa15.4■□□□□ 0.06
CCM2-215ENST00000482714 SERGEFQ9UGK8 458 aa15.4■□□□□ 0.06
CCM2-215ENST00000482714 CYP8B1Q9UNU6 501 aa15.4■□□□□ 0.06
CCM2-215ENST00000482714 TBC1D3DA0A087WVF3 549 aa15.4■□□□□ 0.06
CCM2-215ENST00000482714 TBC1D3IA0A087WXS9 549 aa15.4■□□□□ 0.06
CCM2-215ENST00000482714 TBC1D3EA0A087X179 549 aa15.4■□□□□ 0.06
CCM2-215ENST00000482714 TBC1D3KA0A087X1G2 549 aa15.4■□□□□ 0.06
CCM2-215ENST00000482714 TBC1D3FA6NER0 549 aaPredicted RBP15.4■□□□□ 0.06
CCM2-215ENST00000482714 CAPN8A6NHC0 703 aa15.4■□□□□ 0.06
CCM2-215ENST00000482714 TBC1D3LB9A6J9 549 aa15.4■□□□□ 0.06
CCM2-215ENST00000482714 MAP3K13O43283 966 aa15.4■□□□□ 0.06
CCM2-215ENST00000482714 LILRB5O75023 590 aa15.4■□□□□ 0.06
CCM2-215ENST00000482714 RPP40O75818 363 aaKnown RBP15.4■□□□□ 0.06
CCM2-215ENST00000482714 SEMA4FO95754 770 aa15.4■□□□□ 0.06
CCM2-215ENST00000482714 TBC1D3HP0C7X1 549 aa15.4■□□□□ 0.06
CCM2-215ENST00000482714 VIPR1P32241 457 aa15.4■□□□□ 0.06
CCM2-215ENST00000482714 ACSL1P33121 698 aa15.4■□□□□ 0.06
CCM2-215ENST00000482714 HNF1BP35680 557 aa15.4■□□□□ 0.06
CCM2-215ENST00000482714 ABL2P42684 1182 aa15.4■□□□□ 0.06
CCM2-215ENST00000482714 NPY2RP49146 381 aa15.4■□□□□ 0.06
CCM2-215ENST00000482714 VPS41P49754 854 aa15.4■□□□□ 0.06
CCM2-215ENST00000482714 FAM193AP78312 1265 aa15.4■□□□□ 0.06
CCM2-215ENST00000482714 PDE1BQ01064 536 aa15.4■□□□□ 0.06
CCM2-215ENST00000482714 CREB5Q02930 508 aa15.4■□□□□ 0.06
CCM2-215ENST00000482714 CAV1Q03135 178 aa15.4■□□□□ 0.06
CCM2-215ENST00000482714 CBLBQ13191 982 aa15.4■□□□□ 0.06
CCM2-215ENST00000482714 ARHGEF7Q14155 803 aa15.4■□□□□ 0.06
CCM2-215ENST00000482714 AGERQ15109 404 aa15.4■□□□□ 0.06
CCM2-215ENST00000482714 SIRPB2Q5JXA9 342 aa15.4■□□□□ 0.06
CCM2-215ENST00000482714 FAM182AQ5T1J6 154 aa15.4■□□□□ 0.06
CCM2-215ENST00000482714 FAXCQ5TGI0 409 aa15.4■□□□□ 0.06
CCM2-215ENST00000482714 DUPD1Q68J44 220 aa15.4■□□□□ 0.06
CCM2-215ENST00000482714 TBC1D3GQ6DHY5 549 aa15.4■□□□□ 0.06
CCM2-215ENST00000482714 TBC1D3CQ6IPX1 549 aa15.4■□□□□ 0.06
CCM2-215ENST00000482714 DENND5AQ6IQ26 1287 aa15.4■□□□□ 0.06
CCM2-215ENST00000482714 LRRC8BQ6P9F7 803 aa15.4■□□□□ 0.06
CCM2-215ENST00000482714 ZC3H14Q6PJT7 736 aaKnown RBP15.4■□□□□ 0.06
CCM2-215ENST00000482714 PPP1R21Q6ZMI0 780 aa15.4■□□□□ 0.06
CCM2-215ENST00000482714 NLRP8Q86W28 1048 aa15.4■□□□□ 0.06
CCM2-215ENST00000482714 TRIM69Q86WT6 500 aa15.4■□□□□ 0.06
CCM2-215ENST00000482714 TBC1D3Q8IZP1 549 aaPredicted RBP15.4■□□□□ 0.06
CCM2-215ENST00000482714 NAT8LQ8N9F0 302 aa15.4■□□□□ 0.06
CCM2-215ENST00000482714 BRSK1Q8TDC3 778 aa15.4■□□□□ 0.06
CCM2-215ENST00000482714 SNF8Q96H20 258 aa15.4■□□□□ 0.06
CCM2-215ENST00000482714 ZC3H10Q96K80 434 aaKnown RBP15.4■□□□□ 0.06
CCM2-215ENST00000482714 LRRC1Q9BTT6 524 aa15.4■□□□□ 0.06
CCM2-215ENST00000482714 FICDQ9BVA6 458 aa15.4■□□□□ 0.06
CCM2-215ENST00000482714 FAM129AQ9BZQ8 928 aa15.4■□□□□ 0.06
CCM2-215ENST00000482714 DUSP15Q9H1R2 295 aaPredicted RBP15.4■□□□□ 0.06
CCM2-215ENST00000482714 CASS4Q9NQ75 786 aa15.4■□□□□ 0.06
CCM2-215ENST00000482714 ZNF318Q5VUA4 2279 aa15.39■□□□□ 0.05
CCM2-215ENST00000482714 ANKRD36A6QL64 1941 aa15.39■□□□□ 0.05
CCM2-215ENST00000482714 MAGEB16A2A368 324 aa15.39■□□□□ 0.05
CCM2-215ENST00000482714 METTL12A8MUP2 240 aa15.39■□□□□ 0.05
CCM2-215ENST00000482714 PPFIA2O75334 1257 aa15.39■□□□□ 0.05
CCM2-215ENST00000482714 PCDH8O95206 1070 aa15.39■□□□□ 0.05
CCM2-215ENST00000482714 MMP12P39900 470 aa15.39■□□□□ 0.05
CCM2-215ENST00000482714 DMWDQ09019 674 aa15.39■□□□□ 0.05
CCM2-215ENST00000482714 CALCOCO2Q13137 446 aa15.39■□□□□ 0.05
CCM2-215ENST00000482714 MSLNQ13421 630 aaPredicted RBP15.39■□□□□ 0.05
CCM2-215ENST00000482714 RNASEH2BQ5TBB1 312 aaKnown RBP15.39■□□□□ 0.05
CCM2-215ENST00000482714 KDELC2Q7Z4H8 507 aa15.39■□□□□ 0.05
CCM2-215ENST00000482714 HORMAD1Q86X24 394 aa15.39■□□□□ 0.05
CCM2-215ENST00000482714 CACUL1Q86Y37 369 aa15.39■□□□□ 0.05
CCM2-215ENST00000482714 DNAAF3Q8N9W5 541 aa15.39■□□□□ 0.05
CCM2-215ENST00000482714 RLN3Q8WXF3 142 aa15.39■□□□□ 0.05
CCM2-215ENST00000482714 SEC14L1Q92503 715 aa15.39■□□□□ 0.05
CCM2-215ENST00000482714 CDH19Q9H159 772 aa15.39■□□□□ 0.05
CCM2-215ENST00000482714 XAB2Q9HCS7 855 aaKnown RBP15.39■□□□□ 0.05
CCM2-215ENST00000482714 RAD18Q9NS91 495 aa15.39■□□□□ 0.05
CCM2-215ENST00000482714 F5H423 210 aaPredicted RBP15.38■□□□□ 0.05
CCM2-215ENST00000482714 RNGTTO60942 597 aaKnown RBP15.38■□□□□ 0.05
CCM2-215ENST00000482714 RHOBTB1O94844 696 aa15.38■□□□□ 0.05
CCM2-215ENST00000482714 SEC31AO94979 1220 aaKnown RBP15.38■□□□□ 0.05
CCM2-215ENST00000482714 HEXIM1O94992 359 aaKnown RBP15.38■□□□□ 0.05
CCM2-215ENST00000482714 CRTAMO95727 393 aa15.38■□□□□ 0.05
CCM2-215ENST00000482714 HMGCLP35914 325 aa15.38■□□□□ 0.05
CCM2-215ENST00000482714 PTPN5P54829 565 aa15.38■□□□□ 0.05
CCM2-215ENST00000482714 GALNT3Q14435 633 aa15.38■□□□□ 0.05
CCM2-215ENST00000482714 CDKN3Q16667 212 aa15.38■□□□□ 0.05
CCM2-215ENST00000482714 HIBCHQ6NVY1 386 aaPredicted RBP15.38■□□□□ 0.05
CCM2-215ENST00000482714 CRTC1Q6UUV9 634 aa15.38■□□□□ 0.05
CCM2-215ENST00000482714 LIPIQ6XZB0 460 aa15.38■□□□□ 0.05
CCM2-215ENST00000482714 LPCAT2Q7L5N7 544 aa15.38■□□□□ 0.05
CCM2-215ENST00000482714 NLRP9Q7RTR0 991 aa15.38■□□□□ 0.05
CCM2-215ENST00000482714 TMC3Q7Z5M5 1100 aa15.38■□□□□ 0.05
CCM2-215ENST00000482714 FAM124AQ86V42 546 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms