RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 ADGRE3Q9BY15 652 aa13.3□□□□□ -0.28
HDAC1-208ENST00000482310 LRRC40Q9H9A6 602 aa13.3□□□□□ -0.28
HDAC1-208ENST00000482310 VPS45Q9NRW7 570 aa13.3□□□□□ -0.28
HDAC1-208ENST00000482310 DKK3Q9UBP4 350 aa13.3□□□□□ -0.28
HDAC1-208ENST00000482310 B4GALT6Q9UBX8 382 aa13.3□□□□□ -0.28
HDAC1-208ENST00000482310 PHTF1Q9UMS5 762 aa13.3□□□□□ -0.28
HDAC1-208ENST00000482310 COQ6Q9Y2Z9 468 aa13.3□□□□□ -0.28
HDAC1-208ENST00000482310 NEU2Q9Y3R4 380 aa13.3□□□□□ -0.28
HDAC1-208ENST00000482310 R4GN57 208 aa13.3□□□□□ -0.28
HDAC1-208ENST00000482310 ZFHX2Q9C0A1 2572 aaPredicted RBP13.29□□□□□ -0.28
HDAC1-208ENST00000482310 TMEM131Q92545 1883 aa13.29□□□□□ -0.28
HDAC1-208ENST00000482310 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.29□□□□□ -0.28
HDAC1-208ENST00000482310 NPIPB15A6NHN6 443 aaPredicted RBP13.29□□□□□ -0.28
HDAC1-208ENST00000482310 EFCAB8A8MWE9 144 aa13.29□□□□□ -0.28
HDAC1-208ENST00000482310 SPINT1O43278 529 aa13.29□□□□□ -0.28
HDAC1-208ENST00000482310 PLRG1O43660 514 aaKnown RBP13.29□□□□□ -0.28
HDAC1-208ENST00000482310 FZD6O60353 706 aa13.29□□□□□ -0.28
HDAC1-208ENST00000482310 FSBPO95073 299 aa13.29□□□□□ -0.28
HDAC1-208ENST00000482310 AP2A1O95782 977 aa13.29□□□□□ -0.28
HDAC1-208ENST00000482310 NDST3O95803 873 aa13.29□□□□□ -0.28
HDAC1-208ENST00000482310 ATXN1LP0C7T5 689 aaKnown RBP13.29□□□□□ -0.28
HDAC1-208ENST00000482310 TPH1P17752 444 aa13.29□□□□□ -0.28
HDAC1-208ENST00000482310 HNF1BP35680 557 aa13.29□□□□□ -0.28
HDAC1-208ENST00000482310 GRIA1P42261 906 aa13.29□□□□□ -0.28
HDAC1-208ENST00000482310 POLR2LP62875 67 aaKnown RBP13.29□□□□□ -0.28
HDAC1-208ENST00000482310 SFSWAPQ12872 951 aaKnown RBP13.29□□□□□ -0.28
HDAC1-208ENST00000482310 SEMA5AQ13591 1074 aa13.29□□□□□ -0.28
HDAC1-208ENST00000482310 SLC1A5Q15758 541 aa13.29□□□□□ -0.28
HDAC1-208ENST00000482310 LPAL2Q16609 132 aa13.29□□□□□ -0.28
HDAC1-208ENST00000482310 IZUMO3Q5VZ72 239 aa13.29□□□□□ -0.28
HDAC1-208ENST00000482310 ERAP2Q6P179 960 aa13.29□□□□□ -0.28
HDAC1-208ENST00000482310 USP45Q70EL2 814 aa13.29□□□□□ -0.28
HDAC1-208ENST00000482310 TMEFF1Q8IYR6 380 aa13.29□□□□□ -0.28
HDAC1-208ENST00000482310 OR52K1Q8NGK4 314 aa13.29□□□□□ -0.28
HDAC1-208ENST00000482310 BLOC1S5Q8TDH9 187 aa13.29□□□□□ -0.28
HDAC1-208ENST00000482310 CXorf40AQ8TE69 158 aa13.29□□□□□ -0.28
HDAC1-208ENST00000482310 LRRC45Q96CN5 670 aa13.29□□□□□ -0.28
HDAC1-208ENST00000482310 PPP1R2P1Q96PQ5 205 aa13.29□□□□□ -0.28
HDAC1-208ENST00000482310 MYOCQ99972 504 aa13.29□□□□□ -0.28
HDAC1-208ENST00000482310 C6orf106Q9H6K1 298 aaPredicted RBP13.29□□□□□ -0.28
HDAC1-208ENST00000482310 ZSCAN32Q9NX65 697 aa13.29□□□□□ -0.28
HDAC1-208ENST00000482310 WSB2Q9NYS7 404 aaPredicted RBP13.29□□□□□ -0.28
HDAC1-208ENST00000482310 FZD4Q9ULV1 537 aa13.29□□□□□ -0.28
HDAC1-208ENST00000482310 SHOC2Q9UQ13 582 aa13.29□□□□□ -0.28
HDAC1-208ENST00000482310 SNX24Q9Y343 169 aa13.29□□□□□ -0.28
HDAC1-208ENST00000482310 FADS3Q9Y5Q0 445 aa13.29□□□□□ -0.28
HDAC1-208ENST00000482310 PLXNB3Q9ULL4 1909 aa13.29□□□□□ -0.28
HDAC1-208ENST00000482310 A0A0J9YYE9 177 aa13.28□□□□□ -0.28
HDAC1-208ENST00000482310 C1orf232A0A0U1RR37 186 aa13.28□□□□□ -0.28
HDAC1-208ENST00000482310 CCDC78A2IDD5 438 aa13.28□□□□□ -0.28
HDAC1-208ENST00000482310 LRRC72A6NJI9 287 aa13.28□□□□□ -0.28
HDAC1-208ENST00000482310 ANKRD66B4E2M5 251 aa13.28□□□□□ -0.28
HDAC1-208ENST00000482310 RIOK3O14730 519 aaKnown RBP13.28□□□□□ -0.28
HDAC1-208ENST00000482310 HRO43593 1189 aa13.28□□□□□ -0.28
HDAC1-208ENST00000482310 MMP20O60882 483 aa13.28□□□□□ -0.28
HDAC1-208ENST00000482310 RNGTTO60942 597 aaKnown RBP13.28□□□□□ -0.28
HDAC1-208ENST00000482310 TMEM63AO94886 807 aa13.28□□□□□ -0.28
HDAC1-208ENST00000482310 TRBC1P01850 177 aa13.28□□□□□ -0.28
HDAC1-208ENST00000482310 OXTRP30559 389 aa13.28□□□□□ -0.28
HDAC1-208ENST00000482310 VIPR1P32241 457 aa13.28□□□□□ -0.28
HDAC1-208ENST00000482310 ADRA1AP35348 466 aa13.28□□□□□ -0.28
HDAC1-208ENST00000482310 MMP12P39900 470 aa13.28□□□□□ -0.28
HDAC1-208ENST00000482310 GRIA4P48058 902 aa13.28□□□□□ -0.28
HDAC1-208ENST00000482310 CCDC15Q0P6D6 951 aa13.28□□□□□ -0.28
HDAC1-208ENST00000482310 ELP6Q0PNE2 266 aa13.28□□□□□ -0.28
HDAC1-208ENST00000482310 RALGDSQ12967 914 aa13.28□□□□□ -0.28
HDAC1-208ENST00000482310 SEPT6Q14141 434 aa13.28□□□□□ -0.28
HDAC1-208ENST00000482310 KCNJ11Q14654 390 aa13.28□□□□□ -0.28
HDAC1-208ENST00000482310 SLC14A2Q15849 920 aa13.28□□□□□ -0.28
HDAC1-208ENST00000482310 TEX35Q5T0J7 233 aa13.28□□□□□ -0.28
HDAC1-208ENST00000482310 SEL1L3Q68CR1 1132 aa13.28□□□□□ -0.28
HDAC1-208ENST00000482310 KCTD11Q693B1 232 aa13.28□□□□□ -0.28
HDAC1-208ENST00000482310 C4orf22Q6V702 233 aa13.28□□□□□ -0.28
HDAC1-208ENST00000482310 SYDE1Q6ZW31 735 aaPredicted RBP13.28□□□□□ -0.28
HDAC1-208ENST00000482310 MAATS1Q7Z4T9 603 aa13.28□□□□□ -0.28
HDAC1-208ENST00000482310 NDUFAF2Q8N183 169 aa13.28□□□□□ -0.28
HDAC1-208ENST00000482310 DNAAF3Q8N9W5 541 aa13.28□□□□□ -0.28
HDAC1-208ENST00000482310 CPT1BQ92523 772 aa13.28□□□□□ -0.28
HDAC1-208ENST00000482310 SLCO2A1Q92959 643 aa13.28□□□□□ -0.28
HDAC1-208ENST00000482310 SGK2Q9HBY8 427 aa13.28□□□□□ -0.28
HDAC1-208ENST00000482310 FNDC3AQ9Y2H6 1198 aaKnown RBP13.28□□□□□ -0.28
HDAC1-208ENST00000482310 SPO11Q9Y5K1 396 aa13.28□□□□□ -0.28
HDAC1-208ENST00000482310 TDRD6O60522 2096 aaKnown RBP13.28□□□□□ -0.28
HDAC1-208ENST00000482310 PI4KAP42356 2102 aa13.28□□□□□ -0.28
HDAC1-208ENST00000482310 DMDP11532 3685 aa13.27□□□□□ -0.29
HDAC1-208ENST00000482310 LOC285095A0A1B0GVY8 99 aa13.27□□□□□ -0.29
HDAC1-208ENST00000482310 A0A1W2PQ67 120 aa13.27□□□□□ -0.29
HDAC1-208ENST00000482310 A0A1W2PQU0 124 aa13.27□□□□□ -0.29
HDAC1-208ENST00000482310 ESYT3A0FGR9 886 aa13.27□□□□□ -0.29
HDAC1-208ENST00000482310 FAM187AA6NFU0 413 aa13.27□□□□□ -0.29
HDAC1-208ENST00000482310 IGLON5A6NGN9 336 aa13.27□□□□□ -0.29
HDAC1-208ENST00000482310 CAPN8A6NHC0 703 aa13.27□□□□□ -0.29
HDAC1-208ENST00000482310 MEI4A8MW99 385 aa13.27□□□□□ -0.29
HDAC1-208ENST00000482310 DNALI1O14645 258 aaPredicted RBP13.27□□□□□ -0.29
HDAC1-208ENST00000482310 PSMD3O43242 534 aa13.27□□□□□ -0.29
HDAC1-208ENST00000482310 SLC7A4O43246 635 aa13.27□□□□□ -0.29
HDAC1-208ENST00000482310 BUD23O43709 281 aaKnown RBP13.27□□□□□ -0.29
HDAC1-208ENST00000482310 GFRA3O60609 400 aa13.27□□□□□ -0.29
HDAC1-208ENST00000482310 HEXIM1O94992 359 aaKnown RBP13.27□□□□□ -0.29
HDAC1-208ENST00000482310 CLDN7O95471 211 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms