RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 BLACEA4D250 179 aa16.18■□□□□ 0.18
DDX56-210ENST00000479440 TMEM202A6NGA9 273 aa16.18■□□□□ 0.18
DDX56-210ENST00000479440 LSM8O95777 96 aaKnown RBP16.18■□□□□ 0.18
DDX56-210ENST00000479440 UGT1A3P35503 534 aa16.18■□□□□ 0.18
DDX56-210ENST00000479440 CLCN1P35523 988 aa16.18■□□□□ 0.18
DDX56-210ENST00000479440 BIRC2Q13490 618 aa16.18■□□□□ 0.18
DDX56-210ENST00000479440 NR1D2Q14995 579 aa16.18■□□□□ 0.18
DDX56-210ENST00000479440 KCTD16Q68DU8 428 aa16.18■□□□□ 0.18
DDX56-210ENST00000479440 BRAT1Q6PJG6 821 aa16.18■□□□□ 0.18
DDX56-210ENST00000479440 ZNF438Q7Z4V0 828 aa16.18■□□□□ 0.18
DDX56-210ENST00000479440 ELOA2Q8IYF1 753 aaPredicted RBP16.18■□□□□ 0.18
DDX56-210ENST00000479440 AGBL5Q8NDL9 886 aa16.18■□□□□ 0.18
DDX56-210ENST00000479440 KIAA1143Q96AT1 154 aaPredicted RBP16.18■□□□□ 0.18
DDX56-210ENST00000479440 PSMG3-AS1Q96PY0 264 aa16.18■□□□□ 0.18
DDX56-210ENST00000479440 NUDT22Q9BRQ3 303 aa16.18■□□□□ 0.18
DDX56-210ENST00000479440 TMEM168Q9H0V1 697 aa16.18■□□□□ 0.18
DDX56-210ENST00000479440 MRPL40Q9NQ50 206 aaKnown RBP16.18■□□□□ 0.18
DDX56-210ENST00000479440 TMEM59LQ9UK28 342 aa16.18■□□□□ 0.18
DDX56-210ENST00000479440 DNAJC12Q9UKB3 198 aa16.18■□□□□ 0.18
DDX56-210ENST00000479440 ATP8A1Q9Y2Q0 1164 aa16.18■□□□□ 0.18
DDX56-210ENST00000479440 IGHV5-10-1A0A0J9YXX1 117 aa16.17■□□□□ 0.18
DDX56-210ENST00000479440 CFAP69A5D8W1 941 aa16.17■□□□□ 0.18
DDX56-210ENST00000479440 RAD1O60671 282 aa16.17■□□□□ 0.18
DDX56-210ENST00000479440 LRIG2O94898 1065 aa16.17■□□□□ 0.18
DDX56-210ENST00000479440 PNMA6AP0CW24 399 aaPredicted RBP16.17■□□□□ 0.18
DDX56-210ENST00000479440 FGF3P11487 239 aaPredicted RBP16.17■□□□□ 0.18
DDX56-210ENST00000479440 BMP6P22004 513 aa16.17■□□□□ 0.18
DDX56-210ENST00000479440 PON1P27169 355 aa16.17■□□□□ 0.18
DDX56-210ENST00000479440 ALDH4A1P30038 563 aa16.17■□□□□ 0.18
DDX56-210ENST00000479440 CSTF2P33240 577 aaKnown RBP eCLIP16.17■□□□□ 0.18
DDX56-210ENST00000479440 ADRA1BP35368 520 aa16.17■□□□□ 0.18
DDX56-210ENST00000479440 MAZP56270 477 aaKnown RBP16.17■□□□□ 0.18
DDX56-210ENST00000479440 RAB15P59190 212 aa16.17■□□□□ 0.18
DDX56-210ENST00000479440 CDO1Q16878 200 aa16.17■□□□□ 0.18
DDX56-210ENST00000479440 ATCAYQ86WG3 371 aa16.17■□□□□ 0.18
DDX56-210ENST00000479440 CREBRFQ8IUR6 639 aa16.17■□□□□ 0.18
DDX56-210ENST00000479440 SFTPA2Q8IWL1 248 aa16.17■□□□□ 0.18
DDX56-210ENST00000479440 ZDHHC1Q8WTX9 485 aa16.17■□□□□ 0.18
DDX56-210ENST00000479440 ART4Q93070 314 aa16.17■□□□□ 0.18
DDX56-210ENST00000479440 FUBP1Q96AE4 644 aaKnown RBP16.17■□□□□ 0.18
DDX56-210ENST00000479440 EXOC2Q96KP1 924 aa16.17■□□□□ 0.18
DDX56-210ENST00000479440 EFHD1Q9BUP0 239 aa16.17■□□□□ 0.18
DDX56-210ENST00000479440 ASPSCR1Q9BZE9 553 aa16.17■□□□□ 0.18
DDX56-210ENST00000479440 ZMYND15Q9H091 742 aa16.17■□□□□ 0.18
DDX56-210ENST00000479440 SUV39H2Q9H5I1 410 aa16.17■□□□□ 0.18
DDX56-210ENST00000479440 WDR26Q9H7D7 661 aa16.17■□□□□ 0.18
DDX56-210ENST00000479440 LRRC4CQ9HCJ2 640 aa16.17■□□□□ 0.18
DDX56-210ENST00000479440 CYP4F12Q9HCS2 524 aa16.17■□□□□ 0.18
DDX56-210ENST00000479440 METTL5Q9NRN9 209 aaKnown RBP16.17■□□□□ 0.18
DDX56-210ENST00000479440 MOSPD1Q9UJG1 213 aa16.17■□□□□ 0.18
DDX56-210ENST00000479440 AJAP1Q9UKB5 411 aaPredicted RBP16.17■□□□□ 0.18
DDX56-210ENST00000479440 B3GALT1Q9Y5Z6 326 aa16.17■□□□□ 0.18
DDX56-210ENST00000479440 PRSS38A1L453 326 aa16.16■□□□□ 0.18
DDX56-210ENST00000479440 PDE2AO00408 941 aaPredicted RBP16.16■□□□□ 0.18
DDX56-210ENST00000479440 FOXN3O00409 490 aaPredicted RBP16.16■□□□□ 0.18
DDX56-210ENST00000479440 INSIG1O15503 277 aa16.16■□□□□ 0.18
DDX56-210ENST00000479440 B4GAT1O43505 415 aa16.16■□□□□ 0.18
DDX56-210ENST00000479440 HOXC4P09017 264 aaPredicted RBP16.16■□□□□ 0.18
DDX56-210ENST00000479440 ELFN1P0C7U0 828 aa16.16■□□□□ 0.18
DDX56-210ENST00000479440 CCNB1P14635 433 aa16.16■□□□□ 0.18
DDX56-210ENST00000479440 SDC4P31431 198 aa16.16■□□□□ 0.18
DDX56-210ENST00000479440 STAT1P42224 750 aa16.16■□□□□ 0.18
DDX56-210ENST00000479440 GPR3P46089 330 aa16.16■□□□□ 0.18
DDX56-210ENST00000479440 ARSDP51689 593 aa16.16■□□□□ 0.18
DDX56-210ENST00000479440 LIMK2P53671 638 aa16.16■□□□□ 0.18
DDX56-210ENST00000479440 OR1D5P58170 312 aa16.16■□□□□ 0.18
DDX56-210ENST00000479440 CDC20Q12834 499 aa16.16■□□□□ 0.18
DDX56-210ENST00000479440 ILF3Q12906 894 aaKnown RBP eCLIP16.16■□□□□ 0.18
DDX56-210ENST00000479440 PEX6Q13608 980 aa16.16■□□□□ 0.18
DDX56-210ENST00000479440 SEPT6Q14141 434 aa16.16■□□□□ 0.18
DDX56-210ENST00000479440 LACTB2Q53H82 288 aaPredicted RBP16.16■□□□□ 0.18
DDX56-210ENST00000479440 FAM71AQ8IYT1 594 aa16.16■□□□□ 0.18
DDX56-210ENST00000479440 PLA2G15Q8NCC3 412 aa16.16■□□□□ 0.18
DDX56-210ENST00000479440 OR4D9Q8NGE8 314 aa16.16■□□□□ 0.18
DDX56-210ENST00000479440 PMEPA1Q969W9 287 aa16.16■□□□□ 0.18
DDX56-210ENST00000479440 SLC45A3Q96JT2 553 aa16.16■□□□□ 0.18
DDX56-210ENST00000479440 ZNF641Q96N77 438 aaPredicted RBP16.16■□□□□ 0.18
DDX56-210ENST00000479440 TUBGCP5Q96RT8 1024 aa16.16■□□□□ 0.18
DDX56-210ENST00000479440 DPYSL5Q9BPU6 564 aa16.16■□□□□ 0.18
DDX56-210ENST00000479440 GSDMCQ9BYG8 508 aa16.16■□□□□ 0.18
DDX56-210ENST00000479440 GPN2Q9H9Y4 310 aaPredicted RBP16.16■□□□□ 0.18
DDX56-210ENST00000479440 ZNF71Q9NQZ8 489 aaPredicted RBP16.16■□□□□ 0.18
DDX56-210ENST00000479440 SLC39A1Q9NY26 324 aa16.16■□□□□ 0.18
DDX56-210ENST00000479440 LHX3Q9UBR4 397 aa16.16■□□□□ 0.18
DDX56-210ENST00000479440 SDK2Q58EX2 2172 aa16.16■□□□□ 0.18
DDX56-210ENST00000479440 FAM72CH0Y354 149 aa16.15■□□□□ 0.18
DDX56-210ENST00000479440 BIN1O00499 593 aa16.15■□□□□ 0.18
DDX56-210ENST00000479440 RECQL5O94762 991 aaPredicted RBP16.15■□□□□ 0.18
DDX56-210ENST00000479440 PLEKP08567 350 aaPredicted RBP16.15■□□□□ 0.18
DDX56-210ENST00000479440 PRKAR1AP10644 381 aa16.15■□□□□ 0.18
DDX56-210ENST00000479440 CYP11B1P15538 503 aa16.15■□□□□ 0.18
DDX56-210ENST00000479440 MAN1A1P33908 653 aa16.15■□□□□ 0.18
DDX56-210ENST00000479440 YBEYP58557 167 aaPredicted RBP16.15■□□□□ 0.18
DDX56-210ENST00000479440 PARP15Q460N3 678 aa16.15■□□□□ 0.18
DDX56-210ENST00000479440 C2CD6Q53TS8 623 aa16.15■□□□□ 0.18
DDX56-210ENST00000479440 DCAF12Q5T6F0 453 aa16.15■□□□□ 0.18
DDX56-210ENST00000479440 FAM72AQ5TYM5 149 aa16.15■□□□□ 0.18
DDX56-210ENST00000479440 FAM72DQ6L9T8 149 aa16.15■□□□□ 0.18
DDX56-210ENST00000479440 STRADAQ7RTN6 431 aa16.15■□□□□ 0.18
DDX56-210ENST00000479440 C17orf82Q86X59 251 aaPredicted RBP16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms