RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 UAP1L1Q3KQV9 507 aa20.59■□□□□ 0.89
VARS-224ENST00000479051 DARS2Q6PI48 645 aaKnown RBP20.59■□□□□ 0.89
VARS-224ENST00000479051 CARD9Q9H257 536 aa20.59■□□□□ 0.89
VARS-224ENST00000479051 GAREM1Q9H706 876 aa20.59■□□□□ 0.89
VARS-224ENST00000479051 GLOD4Q9HC38 313 aa20.59■□□□□ 0.89
VARS-224ENST00000479051 PCDH9Q9HC56 1237 aa20.59■□□□□ 0.89
VARS-224ENST00000479051 GDF3Q9NR23 364 aa20.59■□□□□ 0.89
VARS-224ENST00000479051 DNAAF2Q9NVR5 837 aaKnown RBP20.59■□□□□ 0.89
VARS-224ENST00000479051 B4GALT6Q9UBX8 382 aa20.59■□□□□ 0.89
VARS-224ENST00000479051 DNPEPQ9ULA0 475 aa20.59■□□□□ 0.89
VARS-224ENST00000479051 RPL26L1Q9UNX3 145 aaKnown RBP20.59■□□□□ 0.89
VARS-224ENST00000479051 SNX11Q9Y5W9 270 aa20.59■□□□□ 0.89
VARS-224ENST00000479051 KCNK3O14649 394 aa20.58■□□□□ 0.89
VARS-224ENST00000479051 FZD6O60353 706 aa20.58■□□□□ 0.89
VARS-224ENST00000479051 WNT1P04628 370 aa20.58■□□□□ 0.89
VARS-224ENST00000479051 C6P13671 934 aa20.58■□□□□ 0.89
VARS-224ENST00000479051 VIPR1P32241 457 aa20.58■□□□□ 0.89
VARS-224ENST00000479051 CTSKP43235 329 aa20.58■□□□□ 0.89
VARS-224ENST00000479051 TNNT3P45378 269 aaPredicted RBP20.58■□□□□ 0.89
VARS-224ENST00000479051 ID4P47928 161 aa20.58■□□□□ 0.89
VARS-224ENST00000479051 SKOR1P84550 965 aa20.58■□□□□ 0.89
VARS-224ENST00000479051 WASHC5Q12768 1159 aa20.58■□□□□ 0.89
VARS-224ENST00000479051 ARHGEF7Q14155 803 aa20.58■□□□□ 0.89
VARS-224ENST00000479051 PUM1Q14671 1186 aaKnown RBP eCLIP20.58■□□□□ 0.89
VARS-224ENST00000479051 SLC14A2Q15849 920 aa20.58■□□□□ 0.89
VARS-224ENST00000479051 HLA-BQ31612 363 aa20.58■□□□□ 0.89
VARS-224ENST00000479051 PID1Q7Z2X4 250 aa20.58■□□□□ 0.89
VARS-224ENST00000479051 OXR1Q8N573 874 aa20.58■□□□□ 0.89
VARS-224ENST00000479051 IMP4Q96G21 291 aaKnown RBP20.58■□□□□ 0.89
VARS-224ENST00000479051 ADGRE3Q9BY15 652 aa20.58■□□□□ 0.89
VARS-224ENST00000479051 CHKBQ9Y259 395 aa20.58■□□□□ 0.89
VARS-224ENST00000479051 CA5BQ9Y2D0 317 aa20.58■□□□□ 0.89
VARS-224ENST00000479051 ADAMTS9Q9P2N4 1935 aa20.57■□□□□ 0.88
VARS-224ENST00000479051 THEGLP0DJG4 465 aa20.57■□□□□ 0.88
VARS-224ENST00000479051 RBL1P28749 1068 aa20.57■□□□□ 0.88
VARS-224ENST00000479051 NXPH1P58417 271 aa20.57■□□□□ 0.88
VARS-224ENST00000479051 BNC1Q01954 994 aa20.57■□□□□ 0.88
VARS-224ENST00000479051 RALGDSQ12967 914 aa20.57■□□□□ 0.88
VARS-224ENST00000479051 ITPRIPL1Q6GPH6 555 aa20.57■□□□□ 0.88
VARS-224ENST00000479051 CCDC70Q6NSX1 233 aa20.57■□□□□ 0.88
VARS-224ENST00000479051 KYAT3Q6YP21 454 aaKnown RBP20.57■□□□□ 0.88
VARS-224ENST00000479051 GCNT7Q6ZNI0 430 aa20.57■□□□□ 0.88
VARS-224ENST00000479051 PTAR1Q7Z6K3 402 aaPredicted RBP20.57■□□□□ 0.88
VARS-224ENST00000479051 DCP2Q8IU60 420 aaKnown RBP20.57■□□□□ 0.88
VARS-224ENST00000479051 PIH1D2Q8WWB5 315 aa20.57■□□□□ 0.88
VARS-224ENST00000479051 RMDN1Q96DB5 314 aa20.57■□□□□ 0.88
VARS-224ENST00000479051 IFT43Q96FT9 208 aa20.57■□□□□ 0.88
VARS-224ENST00000479051 SCRN2Q96FV2 425 aa20.57■□□□□ 0.88
VARS-224ENST00000479051 RBM15Q96T37 977 aaKnown RBP eCLIP20.57■□□□□ 0.88
VARS-224ENST00000479051 KCTD5Q9NXV2 234 aa20.57■□□□□ 0.88
VARS-224ENST00000479051 DLL3Q9NYJ7 618 aa20.57■□□□□ 0.88
VARS-224ENST00000479051 PPIL1Q9Y3C6 166 aa20.57■□□□□ 0.88
VARS-224ENST00000479051 A0A0J9YYE9 177 aa20.56■□□□□ 0.88
VARS-224ENST00000479051 TOR1BO14657 336 aa20.56■□□□□ 0.88
VARS-224ENST00000479051 YKT6O15498 198 aa20.56■□□□□ 0.88
VARS-224ENST00000479051 TRBC1P01850 177 aa20.56■□□□□ 0.88
VARS-224ENST00000479051 MMP2P08253 660 aa20.56■□□□□ 0.88
VARS-224ENST00000479051 PDHA1P08559 390 aa20.56■□□□□ 0.88
VARS-224ENST00000479051 ZNF883P0CG24 379 aa20.56■□□□□ 0.88
VARS-224ENST00000479051 RABIFP47224 123 aa20.56■□□□□ 0.88
VARS-224ENST00000479051 ARRB1P49407 418 aaPredicted RBP20.56■□□□□ 0.88
VARS-224ENST00000479051 CCT8P50990 548 aa20.56■□□□□ 0.88
VARS-224ENST00000479051 CLDN2P57739 230 aa20.56■□□□□ 0.88
VARS-224ENST00000479051 SEMG2Q02383 582 aa20.56■□□□□ 0.88
VARS-224ENST00000479051 SLC14A1Q13336 389 aa20.56■□□□□ 0.88
VARS-224ENST00000479051 KLF1Q13351 362 aaPredicted RBP20.56■□□□□ 0.88
VARS-224ENST00000479051 LRRC14Q15048 493 aa20.56■□□□□ 0.88
VARS-224ENST00000479051 LIPIQ6XZB0 460 aa20.56■□□□□ 0.88
VARS-224ENST00000479051 ABI3BPQ7Z7G0 1075 aa20.56■□□□□ 0.88
VARS-224ENST00000479051 ZNF567Q8N184 647 aa20.56■□□□□ 0.88
VARS-224ENST00000479051 LPCAT1Q8NF37 534 aa20.56■□□□□ 0.88
VARS-224ENST00000479051 OR2I1PQ8NGU4 316 aa20.56■□□□□ 0.88
VARS-224ENST00000479051 MCCC1Q96RQ3 725 aaPredicted RBP20.56■□□□□ 0.88
VARS-224ENST00000479051 FAM118BQ9BPY3 351 aa20.56■□□□□ 0.88
VARS-224ENST00000479051 FRMD8P1Q9BZ68 369 aaPredicted RBP20.56■□□□□ 0.88
VARS-224ENST00000479051 ERVMER34-1Q9H9K5 563 aa20.56■□□□□ 0.88
VARS-224ENST00000479051 RSPH14Q9UHP6 348 aa20.56■□□□□ 0.88
VARS-224ENST00000479051 COQ6Q9Y2Z9 468 aa20.56■□□□□ 0.88
VARS-224ENST00000479051 CFAP54Q96N23 3096 aa20.55■□□□□ 0.88
VARS-224ENST00000479051 A8MX80 341 aa20.55■□□□□ 0.88
VARS-224ENST00000479051 PSMD11O00231 422 aa20.55■□□□□ 0.88
VARS-224ENST00000479051 RAD51BO15315 384 aa20.55■□□□□ 0.88
VARS-224ENST00000479051 KCNN4O15554 427 aa20.55■□□□□ 0.88
VARS-224ENST00000479051 KIF5CO60282 957 aa20.55■□□□□ 0.88
VARS-224ENST00000479051 HEXIM1O94992 359 aaKnown RBP20.55■□□□□ 0.88
VARS-224ENST00000479051 CTPS1P17812 591 aa20.55■□□□□ 0.88
VARS-224ENST00000479051 ACOX1Q15067 660 aa20.55■□□□□ 0.88
VARS-224ENST00000479051 AGERQ15109 404 aa20.55■□□□□ 0.88
VARS-224ENST00000479051 ZNF423Q2M1K9 1284 aa20.55■□□□□ 0.88
VARS-224ENST00000479051 Q6ZSR6 202 aa20.55■□□□□ 0.88
VARS-224ENST00000479051 SLC13A5Q86YT5 568 aaPredicted RBP20.55■□□□□ 0.88
VARS-224ENST00000479051 REXO1L1PQ8IX06 675 aa20.55■□□□□ 0.88
VARS-224ENST00000479051 CENPTQ96BT3 561 aa20.55■□□□□ 0.88
VARS-224ENST00000479051 ELF4Q99607 663 aaPredicted RBP20.55■□□□□ 0.88
VARS-224ENST00000479051 KLF6Q99612 283 aaPredicted RBP20.55■□□□□ 0.88
VARS-224ENST00000479051 FAM153AQ9UHL3 310 aa20.55■□□□□ 0.88
VARS-224ENST00000479051 JRKLQ9Y4A0 524 aa20.55■□□□□ 0.88
VARS-224ENST00000479051 DOCK9Q9BZ29 2069 aa20.55■□□□□ 0.88
VARS-224ENST00000479051 NPIPB15A6NHN6 443 aaPredicted RBP20.54■□□□□ 0.88
VARS-224ENST00000479051 H0Y8X5 98 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms