RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 HNRNPA2B1P22626 353 aaKnown RBP6.93□□□□□ -1.3
BRCA1-215ENST00000478531 CES1P23141 567 aa6.93□□□□□ -1.3
BRCA1-215ENST00000478531 CD38P28907 300 aa6.93□□□□□ -1.3
BRCA1-215ENST00000478531 AKT2P31751 481 aa6.93□□□□□ -1.3
BRCA1-215ENST00000478531 GRIA4P48058 902 aa6.93□□□□□ -1.3
BRCA1-215ENST00000478531 LIG3P49916 1009 aa6.93□□□□□ -1.3
BRCA1-215ENST00000478531 CLDN2P57739 230 aa6.93□□□□□ -1.3
BRCA1-215ENST00000478531 WASHC5Q12768 1159 aa6.93□□□□□ -1.3
BRCA1-215ENST00000478531 KLF1Q13351 362 aaPredicted RBP6.93□□□□□ -1.3
BRCA1-215ENST00000478531 XRCC4Q13426 336 aa6.93□□□□□ -1.3
BRCA1-215ENST00000478531 GALNT3Q14435 633 aa6.93□□□□□ -1.3
BRCA1-215ENST00000478531 IHHQ14623 411 aa6.93□□□□□ -1.3
BRCA1-215ENST00000478531 PTPRRQ15256 657 aa6.93□□□□□ -1.3
BRCA1-215ENST00000478531 UAP1L1Q3KQV9 507 aa6.93□□□□□ -1.3
BRCA1-215ENST00000478531 TEX44Q53QW1 395 aa6.93□□□□□ -1.3
BRCA1-215ENST00000478531 KDM7AQ6ZMT4 941 aa6.93□□□□□ -1.3
BRCA1-215ENST00000478531 ZNF567Q8N184 647 aa6.93□□□□□ -1.3
BRCA1-215ENST00000478531 SLC35F6Q8N357 371 aa6.93□□□□□ -1.3
BRCA1-215ENST00000478531 SPATA22Q8NHS9 363 aa6.93□□□□□ -1.3
BRCA1-215ENST00000478531 HCAR2Q8TDS4 363 aa6.93□□□□□ -1.3
BRCA1-215ENST00000478531 SMIM14Q96QK8 99 aa6.93□□□□□ -1.3
BRCA1-215ENST00000478531 TLR10Q9BXR5 811 aa6.93□□□□□ -1.3
BRCA1-215ENST00000478531 TDRD1Q9BXT4 1180 aaKnown RBP6.93□□□□□ -1.3
BRCA1-215ENST00000478531 CARD9Q9H257 536 aa6.93□□□□□ -1.3
BRCA1-215ENST00000478531 GLOD4Q9HC38 313 aa6.93□□□□□ -1.3
BRCA1-215ENST00000478531 TMEM9BQ9NQ34 198 aa6.93□□□□□ -1.3
BRCA1-215ENST00000478531 B4GALT6Q9UBX8 382 aa6.93□□□□□ -1.3
BRCA1-215ENST00000478531 CDV3Q9UKY7 258 aaKnown RBP6.93□□□□□ -1.3
BRCA1-215ENST00000478531 TPX2Q9ULW0 747 aaKnown RBP6.93□□□□□ -1.3
BRCA1-215ENST00000478531 DMTF1Q9Y222 760 aa6.93□□□□□ -1.3
BRCA1-215ENST00000478531 ANKRD6Q9Y2G4 727 aa6.93□□□□□ -1.3
BRCA1-215ENST00000478531 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.93□□□□□ -1.3
BRCA1-215ENST00000478531 MYLKQ15746 1914 aa6.93□□□□□ -1.3
BRCA1-215ENST00000478531 SCN8AQ9UQD0 1980 aa6.93□□□□□ -1.3
BRCA1-215ENST00000478531 GOLGA4Q13439 2230 aaKnown RBP6.93□□□□□ -1.3
BRCA1-215ENST00000478531 ASPMQ8IZT6 3477 aa6.93□□□□□ -1.3
BRCA1-215ENST00000478531 NPIPB15A6NHN6 443 aaPredicted RBP6.93□□□□□ -1.3
BRCA1-215ENST00000478531 C4orf47A7E2U8 309 aa6.93□□□□□ -1.3
BRCA1-215ENST00000478531 PRAMEF26H0Y7S4 382 aa6.93□□□□□ -1.3
BRCA1-215ENST00000478531 RAD51BO15315 384 aa6.93□□□□□ -1.3
BRCA1-215ENST00000478531 KIF5CO60282 957 aa6.93□□□□□ -1.3
BRCA1-215ENST00000478531 LZTS3O60299 673 aaPredicted RBP6.93□□□□□ -1.3
BRCA1-215ENST00000478531 CEP104O60308 925 aa6.93□□□□□ -1.3
BRCA1-215ENST00000478531 FOXD2O60548 495 aaPredicted RBP6.93□□□□□ -1.3
BRCA1-215ENST00000478531 PMPCBO75439 489 aa6.93□□□□□ -1.3
BRCA1-215ENST00000478531 TM7SF2O76062 418 aa6.93□□□□□ -1.3
BRCA1-215ENST00000478531 STK10O94804 968 aaKnown RBP6.93□□□□□ -1.3
BRCA1-215ENST00000478531 FGGP02679 453 aa6.93□□□□□ -1.3
BRCA1-215ENST00000478531 SLC4A1P02730 911 aa6.93□□□□□ -1.3
BRCA1-215ENST00000478531 WNT1P04628 370 aa6.93□□□□□ -1.3
BRCA1-215ENST00000478531 NFKBIAP25963 317 aa6.93□□□□□ -1.3
BRCA1-215ENST00000478531 CD68P34810 354 aaPredicted RBP6.93□□□□□ -1.3
BRCA1-215ENST00000478531 NUDT1P36639 197 aa6.93□□□□□ -1.3
BRCA1-215ENST00000478531 SUOXP51687 545 aa6.93□□□□□ -1.3
BRCA1-215ENST00000478531 SKOR1P84550 965 aa6.93□□□□□ -1.3
BRCA1-215ENST00000478531 BNC1Q01954 994 aa6.93□□□□□ -1.3
BRCA1-215ENST00000478531 SNX1Q13596 522 aa6.93□□□□□ -1.3
BRCA1-215ENST00000478531 STAT4Q14765 748 aa6.93□□□□□ -1.3
BRCA1-215ENST00000478531 RSPO4Q2I0M5 234 aaPredicted RBP6.93□□□□□ -1.3
BRCA1-215ENST00000478531 KIF19Q2TAC6 998 aa6.93□□□□□ -1.3
BRCA1-215ENST00000478531 USP45Q70EL2 814 aa6.93□□□□□ -1.3
BRCA1-215ENST00000478531 DPPA4Q7L190 304 aa6.93□□□□□ -1.3
BRCA1-215ENST00000478531 PID1Q7Z2X4 250 aa6.93□□□□□ -1.3
BRCA1-215ENST00000478531 SLC13A5Q86YT5 568 aaPredicted RBP6.93□□□□□ -1.3
BRCA1-215ENST00000478531 MINDY1Q8N5J2 469 aa6.93□□□□□ -1.3
BRCA1-215ENST00000478531 TTC13Q8NBP0 860 aa6.93□□□□□ -1.3
BRCA1-215ENST00000478531 RMDN1Q96DB5 314 aa6.93□□□□□ -1.3
BRCA1-215ENST00000478531 IMP4Q96G21 291 aaKnown RBP6.93□□□□□ -1.3
BRCA1-215ENST00000478531 TEKT5Q96M29 485 aa6.93□□□□□ -1.3
BRCA1-215ENST00000478531 TMEM121Q9BTD3 319 aa6.93□□□□□ -1.3
BRCA1-215ENST00000478531 SLC25A51Q9H1U9 297 aa6.93□□□□□ -1.3
BRCA1-215ENST00000478531 PCDH9Q9HC56 1237 aa6.93□□□□□ -1.3
BRCA1-215ENST00000478531 RSPH14Q9UHP6 348 aa6.93□□□□□ -1.3
BRCA1-215ENST00000478531 PHTF1Q9UMS5 762 aa6.93□□□□□ -1.3
BRCA1-215ENST00000478531 SNX11Q9Y5W9 270 aa6.93□□□□□ -1.3
BRCA1-215ENST00000478531 NCOR2Q9Y618 2525 aa6.92□□□□□ -1.3
BRCA1-215ENST00000478531 A0A1W2PQ67 120 aa6.92□□□□□ -1.3
BRCA1-215ENST00000478531 GOLGA6CA6NDK9 693 aa6.92□□□□□ -1.3
BRCA1-215ENST00000478531 GOLGA6BA6NDN3 693 aa6.92□□□□□ -1.3
BRCA1-215ENST00000478531 POM121BA6NF01 834 aa6.92□□□□□ -1.3
BRCA1-215ENST00000478531 C10orf142B7Z368 130 aa6.92□□□□□ -1.3
BRCA1-215ENST00000478531 CER1O95813 267 aa6.92□□□□□ -1.3
BRCA1-215ENST00000478531 ATP1A1P05023 1023 aaKnown RBP6.92□□□□□ -1.3
BRCA1-215ENST00000478531 PCCBP05166 539 aa6.92□□□□□ -1.3
BRCA1-215ENST00000478531 GOLGA6DP0CG33 693 aa6.92□□□□□ -1.3
BRCA1-215ENST00000478531 THEGLP0DJG4 465 aa6.92□□□□□ -1.3
BRCA1-215ENST00000478531 CYP2A6P11509 494 aaPredicted RBP6.92□□□□□ -1.3
BRCA1-215ENST00000478531 MSNP26038 577 aaKnown RBP6.92□□□□□ -1.3
BRCA1-215ENST00000478531 VIPR1P32241 457 aa6.92□□□□□ -1.3
BRCA1-215ENST00000478531 TNNT3P45378 269 aaPredicted RBP6.92□□□□□ -1.3
BRCA1-215ENST00000478531 IL9RQ01113 521 aa6.92□□□□□ -1.3
BRCA1-215ENST00000478531 RALGDSQ12967 914 aa6.92□□□□□ -1.3
BRCA1-215ENST00000478531 ARHGEF7Q14155 803 aa6.92□□□□□ -1.3
BRCA1-215ENST00000478531 ACOX1Q15067 660 aa6.92□□□□□ -1.3
BRCA1-215ENST00000478531 IRF4Q15306 451 aa6.92□□□□□ -1.3
BRCA1-215ENST00000478531 CNGA3Q16281 694 aa6.92□□□□□ -1.3
BRCA1-215ENST00000478531 HLA-BQ31612 363 aa6.92□□□□□ -1.3
BRCA1-215ENST00000478531 TMEM52BQ4KMG9 183 aa6.92□□□□□ -1.3
BRCA1-215ENST00000478531 STPG1Q5TH74 334 aa6.92□□□□□ -1.3
BRCA1-215ENST00000478531 GCNT7Q6ZNI0 430 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms