RNA–Protein interactions for RNA: ENST00000478214.1

HMGA1-206, Transcript of high mobility group AT-hook 1, humanhuman

TSL 1 (best)

Gene HMGA1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-206ENST00000478214 TP53I13Q8NBR0 393 aaPredicted RBP15.67■□□□□ 0.1
HMGA1-206ENST00000478214 ARRDC2Q8TBH0 407 aa15.67■□□□□ 0.1
HMGA1-206ENST00000478214 FAM174AQ8TBP5 190 aa15.67■□□□□ 0.1
HMGA1-206ENST00000478214 RHBDD1Q8TEB9 315 aa15.67■□□□□ 0.1
HMGA1-206ENST00000478214 SAP25Q8TEE9 199 aa15.67■□□□□ 0.1
HMGA1-206ENST00000478214 IL12RB2Q99665 862 aa15.67■□□□□ 0.1
HMGA1-206ENST00000478214 C1QTNF7Q9BXJ2 289 aa15.67■□□□□ 0.1
HMGA1-206ENST00000478214 HEMGNQ9BXL5 484 aa15.67■□□□□ 0.1
HMGA1-206ENST00000478214 CEP41Q9BYV8 373 aa15.67■□□□□ 0.1
HMGA1-206ENST00000478214 GPR27Q9NS67 375 aa15.67■□□□□ 0.1
HMGA1-206ENST00000478214 SEPT10Q9P0V9 454 aa15.67■□□□□ 0.1
HMGA1-206ENST00000478214 B4GALT6Q9UBX8 382 aa15.67■□□□□ 0.1
HMGA1-206ENST00000478214 PHTF1Q9UMS5 762 aa15.67■□□□□ 0.1
HMGA1-206ENST00000478214 TMEM131Q92545 1883 aa15.66■□□□□ 0.1
HMGA1-206ENST00000478214 YKT6O15498 198 aa15.66■□□□□ 0.1
HMGA1-206ENST00000478214 ITGAVP06756 1048 aa15.66■□□□□ 0.1
HMGA1-206ENST00000478214 PDHA1P08559 390 aa15.66■□□□□ 0.1
HMGA1-206ENST00000478214 ELFN1P0C7U0 828 aa15.66■□□□□ 0.1
HMGA1-206ENST00000478214 TGM2P21980 687 aa15.66■□□□□ 0.1
HMGA1-206ENST00000478214 CES1P23141 567 aa15.66■□□□□ 0.1
HMGA1-206ENST00000478214 CTNNA2P26232 953 aa15.66■□□□□ 0.1
HMGA1-206ENST00000478214 GRK6P43250 576 aa15.66■□□□□ 0.1
HMGA1-206ENST00000478214 PEX5P50542 639 aa15.66■□□□□ 0.1
HMGA1-206ENST00000478214 PFN3P60673 137 aa15.66■□□□□ 0.1
HMGA1-206ENST00000478214 LRRC14Q15048 493 aa15.66■□□□□ 0.1
HMGA1-206ENST00000478214 IRF4Q15306 451 aa15.66■□□□□ 0.1
HMGA1-206ENST00000478214 TRIP6Q15654 476 aaKnown RBP15.66■□□□□ 0.1
HMGA1-206ENST00000478214 PPP2R5EQ16537 467 aa15.66■□□□□ 0.1
HMGA1-206ENST00000478214 WSCD2Q2TBF2 565 aa15.66■□□□□ 0.1
HMGA1-206ENST00000478214 NT5DC3Q86UY8 548 aa15.66■□□□□ 0.1
HMGA1-206ENST00000478214 DCP2Q8IU60 420 aaKnown RBP15.66■□□□□ 0.1
HMGA1-206ENST00000478214 BAHD1Q8TBE0 780 aaPredicted RBP15.66■□□□□ 0.1
HMGA1-206ENST00000478214 ALG3Q92685 438 aa15.66■□□□□ 0.1
HMGA1-206ENST00000478214 HAUS1Q96CS2 278 aa15.66■□□□□ 0.1
HMGA1-206ENST00000478214 HERPUD2Q9BSE4 406 aa15.66■□□□□ 0.1
HMGA1-206ENST00000478214 BRD8Q9H0E9 1235 aa15.66■□□□□ 0.1
HMGA1-206ENST00000478214 HAUS2Q9NVX0 235 aa15.66■□□□□ 0.1
HMGA1-206ENST00000478214 ADGRG1Q9Y653 693 aa15.66■□□□□ 0.1
HMGA1-206ENST00000478214 CCDC66A2RUB6 948 aa15.65■□□□□ 0.1
HMGA1-206ENST00000478214 CFAP69A5D8W1 941 aa15.65■□□□□ 0.1
HMGA1-206ENST00000478214 GOLGA8CPA6NN73 597 aa15.65■□□□□ 0.1
HMGA1-206ENST00000478214 FZD6O60353 706 aa15.65■□□□□ 0.1
HMGA1-206ENST00000478214 SDC3O75056 442 aa15.65■□□□□ 0.1
HMGA1-206ENST00000478214 RECQL5O94762 991 aaPredicted RBP15.65■□□□□ 0.1
HMGA1-206ENST00000478214 CTPS1P17812 591 aa15.65■□□□□ 0.1
HMGA1-206ENST00000478214 PDE1CQ14123 709 aaPredicted RBP15.65■□□□□ 0.1
HMGA1-206ENST00000478214 FZD2Q14332 565 aa15.65■□□□□ 0.1
HMGA1-206ENST00000478214 ZNF542PQ5EBM4 170 aa15.65■□□□□ 0.1
HMGA1-206ENST00000478214 BBS12Q6ZW61 710 aa15.65■□□□□ 0.1
HMGA1-206ENST00000478214 BZW1Q7L1Q6 419 aaKnown RBP15.65■□□□□ 0.1
HMGA1-206ENST00000478214 KANSL1Q7Z3B3 1105 aa15.65■□□□□ 0.1
HMGA1-206ENST00000478214 PIH1D2Q8WWB5 315 aa15.65■□□□□ 0.1
HMGA1-206ENST00000478214 P3H4Q92791 437 aa15.65■□□□□ 0.1
HMGA1-206ENST00000478214 AGAP3Q96P47 875 aa15.65■□□□□ 0.1
HMGA1-206ENST00000478214 SMIM14Q96QK8 99 aa15.65■□□□□ 0.1
HMGA1-206ENST00000478214 AMFRQ9UKV5 643 aa15.65■□□□□ 0.1
HMGA1-206ENST00000478214 CHKBQ9Y259 395 aa15.65■□□□□ 0.1
HMGA1-206ENST00000478214 SPTY2D1-AS1A0A0U1RR47 76 aa15.64■□□□□ 0.09
HMGA1-206ENST00000478214 NPIPB15A6NHN6 443 aaPredicted RBP15.64■□□□□ 0.09
HMGA1-206ENST00000478214 ARHGAP6O43182 974 aa15.64■□□□□ 0.09
HMGA1-206ENST00000478214 FTCDO95954 541 aa15.64■□□□□ 0.09
HMGA1-206ENST00000478214 MMP2P08253 660 aa15.64■□□□□ 0.09
HMGA1-206ENST00000478214 ALPIP09923 528 aa15.64■□□□□ 0.09
HMGA1-206ENST00000478214 GM2AP17900 193 aa15.64■□□□□ 0.09
HMGA1-206ENST00000478214 LHCGRP22888 699 aa15.64■□□□□ 0.09
HMGA1-206ENST00000478214 VIPR1P32241 457 aa15.64■□□□□ 0.09
HMGA1-206ENST00000478214 CD86P42081 329 aa15.64■□□□□ 0.09
HMGA1-206ENST00000478214 RWDD2BP57060 319 aa15.64■□□□□ 0.09
HMGA1-206ENST00000478214 COPS2P61201 443 aa15.64■□□□□ 0.09
HMGA1-206ENST00000478214 AGERQ15109 404 aa15.64■□□□□ 0.09
HMGA1-206ENST00000478214 PRKD1Q15139 912 aaPredicted RBP15.64■□□□□ 0.09
HMGA1-206ENST00000478214 CNGA3Q16281 694 aa15.64■□□□□ 0.09
HMGA1-206ENST00000478214 INAVAQ3KP66 663 aa15.64■□□□□ 0.09
HMGA1-206ENST00000478214 AADACL2Q6P093 401 aa15.64■□□□□ 0.09
HMGA1-206ENST00000478214 PEX26Q7Z412 305 aa15.64■□□□□ 0.09
HMGA1-206ENST00000478214 CCDC112Q8NEF3 446 aa15.64■□□□□ 0.09
HMGA1-206ENST00000478214 TFB1MQ8WVM0 346 aaKnown RBP15.64■□□□□ 0.09
HMGA1-206ENST00000478214 SCRN2Q96FV2 425 aa15.64■□□□□ 0.09
HMGA1-206ENST00000478214 MCCC1Q96RQ3 725 aaPredicted RBP15.64■□□□□ 0.09
HMGA1-206ENST00000478214 TDRD1Q9BXT4 1180 aaKnown RBP15.64■□□□□ 0.09
HMGA1-206ENST00000478214 DNAJC28Q9NX36 388 aa15.64■□□□□ 0.09
HMGA1-206ENST00000478214 PACSIN2Q9UNF0 486 aaPredicted RBP15.64■□□□□ 0.09
HMGA1-206ENST00000478214 PPIL1Q9Y3C6 166 aa15.64■□□□□ 0.09
HMGA1-206ENST00000478214 ANKRD36A6QL64 1941 aa15.63■□□□□ 0.09
HMGA1-206ENST00000478214 A0A0U1RQS6 177 aa15.63■□□□□ 0.09
HMGA1-206ENST00000478214 HEXIM1O94992 359 aaKnown RBP15.63■□□□□ 0.09
HMGA1-206ENST00000478214 PRLP01236 227 aa15.63■□□□□ 0.09
HMGA1-206ENST00000478214 PCCBP05166 539 aa15.63■□□□□ 0.09
HMGA1-206ENST00000478214 PYGMP11217 842 aa15.63■□□□□ 0.09
HMGA1-206ENST00000478214 CYP2A6P11509 494 aaPredicted RBP15.63■□□□□ 0.09
HMGA1-206ENST00000478214 NFKBIAP25963 317 aa15.63■□□□□ 0.09
HMGA1-206ENST00000478214 PMLP29590 882 aa15.63■□□□□ 0.09
HMGA1-206ENST00000478214 HNF1BP35680 557 aa15.63■□□□□ 0.09
HMGA1-206ENST00000478214 THOP1P52888 689 aa15.63■□□□□ 0.09
HMGA1-206ENST00000478214 YPEL5P62699 121 aa15.63■□□□□ 0.09
HMGA1-206ENST00000478214 SKOR1P84550 965 aa15.63■□□□□ 0.09
HMGA1-206ENST00000478214 INPP5AQ14642 412 aa15.63■□□□□ 0.09
HMGA1-206ENST00000478214 ACOX1Q15067 660 aa15.63■□□□□ 0.09
HMGA1-206ENST00000478214 TEX44Q53QW1 395 aa15.63■□□□□ 0.09
HMGA1-206ENST00000478214 DENND2CQ68D51 928 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms