RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-212ENST00000477520 SEC23AQ15436 765 aa4.76□□□□□ -1.65
PTCD3-212ENST00000477520 SLC1A5Q15758 541 aa4.76□□□□□ -1.65
PTCD3-212ENST00000477520 NPY5RQ15761 445 aa4.76□□□□□ -1.65
PTCD3-212ENST00000477520 IL17AQ16552 155 aa4.76□□□□□ -1.65
PTCD3-212ENST00000477520 ARHGAP44Q17R89 818 aa4.76□□□□□ -1.65
PTCD3-212ENST00000477520 PLEKHG4Q58EX7 1191 aa4.76□□□□□ -1.65
PTCD3-212ENST00000477520 PPM1LQ5SGD2 360 aa4.76□□□□□ -1.65
PTCD3-212ENST00000477520 PRR31Q5SQ13 230 aa4.76□□□□□ -1.65
PTCD3-212ENST00000477520 NOL9Q5SY16 702 aaKnown RBP4.76□□□□□ -1.65
PTCD3-212ENST00000477520 DCAF12L1Q5VU92 463 aa4.76□□□□□ -1.65
PTCD3-212ENST00000477520 LPCAT4Q643R3 524 aa4.76□□□□□ -1.65
PTCD3-212ENST00000477520 PLEKHA7Q6IQ23 1121 aa4.76□□□□□ -1.65
PTCD3-212ENST00000477520 ANKRD26P1Q6NSI1 321 aa4.76□□□□□ -1.65
PTCD3-212ENST00000477520 ZNF585AQ6P3V2 769 aa4.76□□□□□ -1.65
PTCD3-212ENST00000477520 IYDQ6PHW0 289 aa4.76□□□□□ -1.65
PTCD3-212ENST00000477520 TMC5Q6UXY8 1006 aa4.76□□□□□ -1.65
PTCD3-212ENST00000477520 PLEKHG7Q6ZR37 379 aa4.76□□□□□ -1.65
PTCD3-212ENST00000477520 PIK3AP1Q6ZUJ8 805 aa4.76□□□□□ -1.65
PTCD3-212ENST00000477520 USP43Q70EL4 1123 aa4.76□□□□□ -1.65
PTCD3-212ENST00000477520 GSTA5Q7RTV2 222 aa4.76□□□□□ -1.65
PTCD3-212ENST00000477520 GALNT13Q8IUC8 556 aa4.76□□□□□ -1.65
PTCD3-212ENST00000477520 CTAGE3PQ8IX95 158 aa4.76□□□□□ -1.65
PTCD3-212ENST00000477520 PALM2Q8IXS6 379 aa4.76□□□□□ -1.65
PTCD3-212ENST00000477520 CADM3Q8N126 398 aa4.76□□□□□ -1.65
PTCD3-212ENST00000477520 MAGEB6Q8N7X4 407 aa4.76□□□□□ -1.65
PTCD3-212ENST00000477520 ASCC1Q8N9N2 400 aaKnown RBP4.76□□□□□ -1.65
PTCD3-212ENST00000477520 SLC4A11Q8NBS3 891 aa4.76□□□□□ -1.65
PTCD3-212ENST00000477520 PIK3C3Q8NEB9 887 aa4.76□□□□□ -1.65
PTCD3-212ENST00000477520 RFWD2Q8NHY2 731 aa4.76□□□□□ -1.65
PTCD3-212ENST00000477520 UHMK1Q8TAS1 419 aaKnown RBP4.76□□□□□ -1.65
PTCD3-212ENST00000477520 PSPC1Q8WXF1 523 aaKnown RBP4.76□□□□□ -1.65
PTCD3-212ENST00000477520 LARP4BQ92615 738 aaKnown RBP4.76□□□□□ -1.65
PTCD3-212ENST00000477520 KRT35Q92764 455 aa4.76□□□□□ -1.65
PTCD3-212ENST00000477520 CD101Q93033 1021 aa4.76□□□□□ -1.65
PTCD3-212ENST00000477520 CIDECQ96AQ7 238 aaPredicted RBP4.76□□□□□ -1.65
PTCD3-212ENST00000477520 SLC39A13Q96H72 371 aa4.76□□□□□ -1.65
PTCD3-212ENST00000477520 WNK4Q96J92 1243 aa4.76□□□□□ -1.65
PTCD3-212ENST00000477520 RPRD1AQ96P16 312 aaPredicted RBP4.76□□□□□ -1.65
PTCD3-212ENST00000477520 VPS35Q96QK1 796 aa4.76□□□□□ -1.65
PTCD3-212ENST00000477520 GMLQ99445 158 aa4.76□□□□□ -1.65
PTCD3-212ENST00000477520 COQ7Q99807 217 aa4.76□□□□□ -1.65
PTCD3-212ENST00000477520 TRIM15Q9C019 465 aa4.76□□□□□ -1.65
PTCD3-212ENST00000477520 NMUR2Q9GZQ4 415 aa4.76□□□□□ -1.65
PTCD3-212ENST00000477520 PUS7LQ9H0K6 701 aaKnown RBP4.76□□□□□ -1.65
PTCD3-212ENST00000477520 RPF2Q9H7B2 306 aaKnown RBP4.76□□□□□ -1.65
PTCD3-212ENST00000477520 DNAJC18Q9H819 358 aa4.76□□□□□ -1.65
PTCD3-212ENST00000477520 ERVK-5Q9HDB9 667 aa4.76□□□□□ -1.65
PTCD3-212ENST00000477520 MLXIPLQ9NP71 852 aa4.76□□□□□ -1.65
PTCD3-212ENST00000477520 C12orf4Q9NQ89 552 aa4.76□□□□□ -1.65
PTCD3-212ENST00000477520 ARHGEF4Q9NR80 690 aa4.76□□□□□ -1.65
PTCD3-212ENST00000477520 ADARB2Q9NS39 739 aaKnown RBP4.76□□□□□ -1.65
PTCD3-212ENST00000477520 FBXO28Q9NVF7 368 aa4.76□□□□□ -1.65
PTCD3-212ENST00000477520 DNAJC28Q9NX36 388 aa4.76□□□□□ -1.65
PTCD3-212ENST00000477520 HACL1Q9UJ83 578 aa4.76□□□□□ -1.65
PTCD3-212ENST00000477520 STOML2Q9UJZ1 356 aa4.76□□□□□ -1.65
PTCD3-212ENST00000477520 PSME2Q9UL46 239 aa4.76□□□□□ -1.65
PTCD3-212ENST00000477520 SNX7Q9UNH6 387 aa4.76□□□□□ -1.65
PTCD3-212ENST00000477520 EIF3LQ9Y262 564 aaKnown RBP4.76□□□□□ -1.65
PTCD3-212ENST00000477520 DRG1Q9Y295 367 aaKnown RBP4.76□□□□□ -1.65
PTCD3-212ENST00000477520 ZNF451Q9Y4E5 1061 aa4.76□□□□□ -1.65
PTCD3-212ENST00000477520 COMMD10Q9Y6G5 202 aa4.76□□□□□ -1.65
PTCD3-212ENST00000477520 SLC4A4Q9Y6R1 1079 aa4.76□□□□□ -1.65
PTCD3-212ENST00000477520 CLUHO75153 1309 aa4.75□□□□□ -1.65
PTCD3-212ENST00000477520 ZNF541Q9H0D2 1346 aa4.75□□□□□ -1.65
PTCD3-212ENST00000477520 SCN4AP35499 1836 aa4.75□□□□□ -1.65
PTCD3-212ENST00000477520 DOCK2Q92608 1830 aa4.75□□□□□ -1.65
PTCD3-212ENST00000477520 ESYT2A0FGR8 921 aa4.75□□□□□ -1.65
PTCD3-212ENST00000477520 PABPN1LA6NDY0 278 aaKnown RBP4.75□□□□□ -1.65
PTCD3-212ENST00000477520 OR5K3A6NET4 321 aa4.75□□□□□ -1.65
PTCD3-212ENST00000477520 SDR42E2A6NKP2 422 aa4.75□□□□□ -1.65
PTCD3-212ENST00000477520 C16orf96A6NNT2 1141 aa4.75□□□□□ -1.65
PTCD3-212ENST00000477520 H3BMQ9 156 aa4.75□□□□□ -1.65
PTCD3-212ENST00000477520 DNALI1O14645 258 aaPredicted RBP4.75□□□□□ -1.65
PTCD3-212ENST00000477520 YKT6O15498 198 aa4.75□□□□□ -1.65
PTCD3-212ENST00000477520 LAMTOR5O43504 91 aa4.75□□□□□ -1.65
PTCD3-212ENST00000477520 LPXNO60711 386 aa4.75□□□□□ -1.65
PTCD3-212ENST00000477520 CPNE6O95741 557 aa4.75□□□□□ -1.65
PTCD3-212ENST00000477520 PTTG1O95997 202 aa4.75□□□□□ -1.65
PTCD3-212ENST00000477520 FGRP09769 529 aa4.75□□□□□ -1.65
PTCD3-212ENST00000477520 RALBP11234 206 aa4.75□□□□□ -1.65
PTCD3-212ENST00000477520 PLS3P13797 630 aa4.75□□□□□ -1.65
PTCD3-212ENST00000477520 VEGFAP15692 232 aaPredicted RBP4.75□□□□□ -1.65
PTCD3-212ENST00000477520 TCEA1P23193 301 aaKnown RBP4.75□□□□□ -1.65
PTCD3-212ENST00000477520 MYF6P23409 242 aa4.75□□□□□ -1.65
PTCD3-212ENST00000477520 CFL1P23528 166 aaKnown RBP4.75□□□□□ -1.65
PTCD3-212ENST00000477520 GRK2P25098 689 aa4.75□□□□□ -1.65
PTCD3-212ENST00000477520 CNTFP26441 200 aa4.75□□□□□ -1.65
PTCD3-212ENST00000477520 EEF1DP29692 281 aaKnown RBP4.75□□□□□ -1.65
PTCD3-212ENST00000477520 PTGS2P35354 604 aa4.75□□□□□ -1.65
PTCD3-212ENST00000477520 IDUAP35475 653 aa4.75□□□□□ -1.65
PTCD3-212ENST00000477520 PIK3CAP42336 1068 aa4.75□□□□□ -1.65
PTCD3-212ENST00000477520 ETV4P43268 484 aa4.75□□□□□ -1.65
PTCD3-212ENST00000477520 PSMD8P48556 350 aa4.75□□□□□ -1.65
PTCD3-212ENST00000477520 NME5P56597 212 aa4.75□□□□□ -1.65
PTCD3-212ENST00000477520 YWHAGP61981 247 aaKnown RBP eCLIP4.75□□□□□ -1.65
PTCD3-212ENST00000477520 GALNT2Q10471 571 aa4.75□□□□□ -1.65
PTCD3-212ENST00000477520 BST2Q10589 180 aaKnown RBP4.75□□□□□ -1.65
PTCD3-212ENST00000477520 CETN1Q12798 172 aa4.75□□□□□ -1.65
PTCD3-212ENST00000477520 ILF2Q12905 390 aaKnown RBP4.75□□□□□ -1.65
PTCD3-212ENST00000477520 NFATC3Q12968 1075 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms