RNA–Protein interactions for RNA: ENST00000475800.5

SNX13-207, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 507 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-207ENST00000475800 ZCCHC9Q8N567 271 aaKnown RBP15.21■□□□□ 0.03
SNX13-207ENST00000475800 C1orf216Q8TAB5 229 aa15.21■□□□□ 0.03
SNX13-207ENST00000475800 SLC35B2Q8TB61 432 aa15.21■□□□□ 0.03
SNX13-207ENST00000475800 FAM174AQ8TBP5 190 aa15.21■□□□□ 0.03
SNX13-207ENST00000475800 SERAC1Q96JX3 654 aa15.21■□□□□ 0.03
SNX13-207ENST00000475800 NSMCE3Q96MG7 304 aa15.21■□□□□ 0.03
SNX13-207ENST00000475800 NAP1L3Q99457 506 aaPredicted RBP15.21■□□□□ 0.03
SNX13-207ENST00000475800 CEP41Q9BYV8 373 aa15.21■□□□□ 0.03
SNX13-207ENST00000475800 ZDHHC5Q9C0B5 715 aa15.21■□□□□ 0.03
SNX13-207ENST00000475800 HOMER3Q9NSC5 361 aa15.21■□□□□ 0.03
SNX13-207ENST00000475800 ZFR2Q9UPR6 939 aaKnown RBP15.21■□□□□ 0.03
SNX13-207ENST00000475800 PPIL1Q9Y3C6 166 aa15.21■□□□□ 0.03
SNX13-207ENST00000475800 TP53BP1Q12888 1972 aaPredicted RBP15.21■□□□□ 0.03
SNX13-207ENST00000475800 ADAMTS9Q9P2N4 1935 aa15.2■□□□□ 0.02
SNX13-207ENST00000475800 USP27XA6NNY8 438 aa15.2■□□□□ 0.02
SNX13-207ENST00000475800 ENC1O14682 589 aa15.2■□□□□ 0.02
SNX13-207ENST00000475800 KCNN4O15554 427 aa15.2■□□□□ 0.02
SNX13-207ENST00000475800 SPINT1O43278 529 aa15.2■□□□□ 0.02
SNX13-207ENST00000475800 CEP104O60308 925 aa15.2■□□□□ 0.02
SNX13-207ENST00000475800 FZD6O60353 706 aa15.2■□□□□ 0.02
SNX13-207ENST00000475800 MAGEC1O60732 1142 aa15.2■□□□□ 0.02
SNX13-207ENST00000475800 OPHN1O60890 802 aa15.2■□□□□ 0.02
SNX13-207ENST00000475800 TM7SF2O76062 418 aa15.2■□□□□ 0.02
SNX13-207ENST00000475800 FGGP02679 453 aa15.2■□□□□ 0.02
SNX13-207ENST00000475800 SYPP08247 313 aa15.2■□□□□ 0.02
SNX13-207ENST00000475800 HNRNPA2B1P22626 353 aaKnown RBP15.2■□□□□ 0.02
SNX13-207ENST00000475800 MAT2AP31153 395 aaKnown RBP15.2■□□□□ 0.02
SNX13-207ENST00000475800 STIP1P31948 543 aaKnown RBP15.2■□□□□ 0.02
SNX13-207ENST00000475800 TNNT3P45378 269 aaPredicted RBP15.2■□□□□ 0.02
SNX13-207ENST00000475800 FAM193AP78312 1265 aa15.2■□□□□ 0.02
SNX13-207ENST00000475800 SKOR1P84550 965 aa15.2■□□□□ 0.02
SNX13-207ENST00000475800 OVGP1Q12889 678 aa15.2■□□□□ 0.02
SNX13-207ENST00000475800 DPPA4Q7L190 304 aa15.2■□□□□ 0.02
SNX13-207ENST00000475800 IQCHQ86VS3 1027 aa15.2■□□□□ 0.02
SNX13-207ENST00000475800 ZNF567Q8N184 647 aa15.2■□□□□ 0.02
SNX13-207ENST00000475800 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.2■□□□□ 0.02
SNX13-207ENST00000475800 DENND6BQ8NEG7 585 aa15.2■□□□□ 0.02
SNX13-207ENST00000475800 DEFB124Q8NES8 71 aa15.2■□□□□ 0.02
SNX13-207ENST00000475800 SCRN2Q96FV2 425 aa15.2■□□□□ 0.02
SNX13-207ENST00000475800 FCRL5Q96RD9 977 aa15.2■□□□□ 0.02
SNX13-207ENST00000475800 ORAI3Q9BRQ5 295 aa15.2■□□□□ 0.02
SNX13-207ENST00000475800 GTPBP2Q9BX10 602 aaKnown RBP15.2■□□□□ 0.02
SNX13-207ENST00000475800 C1QTNF2Q9BXJ5 285 aa15.2■□□□□ 0.02
SNX13-207ENST00000475800 ADGRE3Q9BY15 652 aa15.2■□□□□ 0.02
SNX13-207ENST00000475800 SLC17A9Q9BYT1 436 aa15.2■□□□□ 0.02
SNX13-207ENST00000475800 PCDH9Q9HC56 1237 aa15.2■□□□□ 0.02
SNX13-207ENST00000475800 CAPN10Q9HC96 672 aa15.2■□□□□ 0.02
SNX13-207ENST00000475800 TM9SF3Q9HD45 589 aa15.2■□□□□ 0.02
SNX13-207ENST00000475800 KCTD5Q9NXV2 234 aa15.2■□□□□ 0.02
SNX13-207ENST00000475800 FAM153AQ9UHL3 310 aa15.2■□□□□ 0.02
SNX13-207ENST00000475800 ITM2BQ9Y287 266 aa15.2■□□□□ 0.02
SNX13-207ENST00000475800 FRYQ5TBA9 3013 aa15.2■□□□□ 0.02
SNX13-207ENST00000475800 KMT2BQ9UMN6 2715 aaPredicted RBP15.2■□□□□ 0.02
SNX13-207ENST00000475800 ASCC3Q8N3C0 2202 aaKnown RBP15.2■□□□□ 0.02
SNX13-207ENST00000475800 PCDH15Q96QU1 1955 aa15.19■□□□□ 0.02
SNX13-207ENST00000475800 TCRBV7S2A1N4TA0A589 114 aa15.19■□□□□ 0.02
SNX13-207ENST00000475800 CES2O00748 559 aa15.19■□□□□ 0.02
SNX13-207ENST00000475800 CDX4O14627 284 aaPredicted RBP15.19■□□□□ 0.02
SNX13-207ENST00000475800 SLC31A1O15431 190 aa15.19■□□□□ 0.02
SNX13-207ENST00000475800 ANXA9O76027 345 aa15.19■□□□□ 0.02
SNX13-207ENST00000475800 MMP2P08253 660 aa15.19■□□□□ 0.02
SNX13-207ENST00000475800 VIPR1P32241 457 aa15.19■□□□□ 0.02
SNX13-207ENST00000475800 CD68P34810 354 aaPredicted RBP15.19■□□□□ 0.02
SNX13-207ENST00000475800 GNG11P61952 73 aa15.19■□□□□ 0.02
SNX13-207ENST00000475800 STAT4Q14765 748 aa15.19■□□□□ 0.02
SNX13-207ENST00000475800 LRRC73Q5JTD7 316 aa15.19■□□□□ 0.02
SNX13-207ENST00000475800 SEL1L3Q68CR1 1132 aa15.19■□□□□ 0.02
SNX13-207ENST00000475800 CCDC70Q6NSX1 233 aa15.19■□□□□ 0.02
SNX13-207ENST00000475800 DRICH1Q6PGQ1 229 aaPredicted RBP15.19■□□□□ 0.02
SNX13-207ENST00000475800 ADAT2Q7Z6V5 191 aaKnown RBP15.19■□□□□ 0.02
SNX13-207ENST00000475800 PIH1D2Q8WWB5 315 aa15.19■□□□□ 0.02
SNX13-207ENST00000475800 TADA1Q96BN2 335 aa15.19■□□□□ 0.02
SNX13-207ENST00000475800 SPATA13Q96N96 652 aa15.19■□□□□ 0.02
SNX13-207ENST00000475800 LENG8Q96PV6 779 aaPredicted RBP15.19■□□□□ 0.02
SNX13-207ENST00000475800 MCCC1Q96RQ3 725 aaPredicted RBP15.19■□□□□ 0.02
SNX13-207ENST00000475800 RBM15Q96T37 977 aaKnown RBP eCLIP15.19■□□□□ 0.024e-7■■□□□ 11.6
SNX13-207ENST00000475800 FAM118BQ9BPY3 351 aa15.19■□□□□ 0.02
SNX13-207ENST00000475800 GBA3Q9H227 469 aa15.19■□□□□ 0.02
SNX13-207ENST00000475800 EBF2Q9HAK2 575 aa15.19■□□□□ 0.02
SNX13-207ENST00000475800 USP29Q9HBJ7 922 aa15.19■□□□□ 0.02
SNX13-207ENST00000475800 AASDHPPTQ9NRN7 309 aa15.19■□□□□ 0.02
SNX13-207ENST00000475800 RSPH14Q9UHP6 348 aa15.19■□□□□ 0.02
SNX13-207ENST00000475800 GGT7Q9UJ14 662 aa15.19■□□□□ 0.02
SNX13-207ENST00000475800 TTC7AQ9ULT0 858 aaPredicted RBP15.19■□□□□ 0.02
SNX13-207ENST00000475800 CHKBQ9Y259 395 aa15.19■□□□□ 0.02
SNX13-207ENST00000475800 R3HDM2Q9Y2K5 976 aaKnown RBP15.19■□□□□ 0.02
SNX13-207ENST00000475800 GOLGA6CA6NDK9 693 aa15.18■□□□□ 0.02
SNX13-207ENST00000475800 GOLGA6BA6NDN3 693 aa15.18■□□□□ 0.02
SNX13-207ENST00000475800 C5orf60A6NFR6 353 aa15.18■□□□□ 0.02
SNX13-207ENST00000475800 IGLON5A6NGN9 336 aa15.18■□□□□ 0.02
SNX13-207ENST00000475800 C1QTNF9BB2RNN3 333 aa15.18■□□□□ 0.02
SNX13-207ENST00000475800 PSMD11O00231 422 aa15.18■□□□□ 0.02
SNX13-207ENST00000475800 VILLO15195 856 aa15.18■□□□□ 0.02
SNX13-207ENST00000475800 LIASO43766 372 aa15.18■□□□□ 0.02
SNX13-207ENST00000475800 MMP20O60882 483 aa15.18■□□□□ 0.02
SNX13-207ENST00000475800 ATP1A1P05023 1023 aaKnown RBP15.18■□□□□ 0.02
SNX13-207ENST00000475800 ELFN1P0C7U0 828 aa15.18■□□□□ 0.02
SNX13-207ENST00000475800 C1QTNF9P0C862 333 aa15.18■□□□□ 0.02
SNX13-207ENST00000475800 GOLGA6DP0CG33 693 aa15.18■□□□□ 0.02
SNX13-207ENST00000475800 TCP1P17987 556 aaKnown RBP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms