RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 ELNP15502 786 aa11□□□□□ -0.65
VAPB-204ENST00000475243 ITPKBP27987 946 aa11□□□□□ -0.65
VAPB-204ENST00000475243 CRYBB1P53674 252 aaPredicted RBP11□□□□□ -0.65
VAPB-204ENST00000475243 CERCAMQ5T4B2 595 aa11□□□□□ -0.65
VAPB-204ENST00000475243 PMF1Q6P1K2 205 aa11□□□□□ -0.65
VAPB-204ENST00000475243 ADGRG2Q8IZP9 1017 aa11□□□□□ -0.65
VAPB-204ENST00000475243 FCRL2Q96LA5 508 aaPredicted RBP11□□□□□ -0.65
VAPB-204ENST00000475243 FTHL17Q9BXU8 183 aa11□□□□□ -0.65
VAPB-204ENST00000475243 SPAG4Q9NPE6 437 aa11□□□□□ -0.65
VAPB-204ENST00000475243 RAB23Q9ULC3 237 aa11□□□□□ -0.65
VAPB-204ENST00000475243 ADAMTS13Q76LX8 1427 aa11□□□□□ -0.65
VAPB-204ENST00000475243 FER1L4A9Z1Z3 1794 aa11□□□□□ -0.65
VAPB-204ENST00000475243 RFXANKO14593 260 aa11□□□□□ -0.65
VAPB-204ENST00000475243 MANFP55145 182 aaKnown RBP11□□□□□ -0.65
VAPB-204ENST00000475243 ITGA1P56199 1179 aa11□□□□□ -0.65
VAPB-204ENST00000475243 TAS2R41P59536 307 aa11□□□□□ -0.65
VAPB-204ENST00000475243 DEFB115Q30KQ5 88 aa11□□□□□ -0.65
VAPB-204ENST00000475243 ARMC3Q5W041 872 aa11□□□□□ -0.65
VAPB-204ENST00000475243 ZNF540Q8NDQ6 660 aa11□□□□□ -0.65
VAPB-204ENST00000475243 ATL1Q8WXF7 558 aa11□□□□□ -0.65
VAPB-204ENST00000475243 PCDHGC5Q9Y5F6 944 aa11□□□□□ -0.65
VAPB-204ENST00000475243 SLC28A1O00337 649 aa11□□□□□ -0.65
VAPB-204ENST00000475243 SCN2BO60939 215 aa11□□□□□ -0.65
VAPB-204ENST00000475243 STX11O75558 287 aa11□□□□□ -0.65
VAPB-204ENST00000475243 ZBTB11O95625 1053 aaPredicted RBP11□□□□□ -0.65
VAPB-204ENST00000475243 CLK3P49761 638 aaKnown RBP11□□□□□ -0.65
VAPB-204ENST00000475243 PURAQ00577 322 aaKnown RBP11□□□□□ -0.65
VAPB-204ENST00000475243 RBBP4Q09028 425 aa11□□□□□ -0.65
VAPB-204ENST00000475243 LIPMQ5VYY2 423 aa11□□□□□ -0.65
VAPB-204ENST00000475243 AMIGO2Q86SJ2 522 aa11□□□□□ -0.65
VAPB-204ENST00000475243 TTLL2Q9BWV7 592 aa11□□□□□ -0.65
VAPB-204ENST00000475243 ACE2Q9BYF1 805 aaPredicted RBP11□□□□□ -0.65
VAPB-204ENST00000475243 TMEM138Q9NPI0 162 aa11□□□□□ -0.65
VAPB-204ENST00000475243 ZMYND8Q9ULU4 1186 aaPredicted RBP11□□□□□ -0.65
VAPB-204ENST00000475243 CNTNAP1P78357 1384 aa11□□□□□ -0.65
VAPB-204ENST00000475243 ZMYM2Q9UBW7 1377 aa11□□□□□ -0.65
VAPB-204ENST00000475243 RCCD1A6NED2 376 aa11□□□□□ -0.65
VAPB-204ENST00000475243 OR4Q2P0C623 313 aa11□□□□□ -0.65
VAPB-204ENST00000475243 ARF4P18085 180 aaPredicted RBP11□□□□□ -0.65
VAPB-204ENST00000475243 PSEN1P49768 467 aa11□□□□□ -0.65
VAPB-204ENST00000475243 ZNF135P52742 658 aaPredicted RBP11□□□□□ -0.65
VAPB-204ENST00000475243 MRPS5P82675 430 aaKnown RBP11□□□□□ -0.65
VAPB-204ENST00000475243 C9orf57Q5W0N0 161 aa11□□□□□ -0.65
VAPB-204ENST00000475243 C12orf50Q8NA57 414 aaPredicted RBP11□□□□□ -0.65
VAPB-204ENST00000475243 GULP1Q9UBP9 304 aa11□□□□□ -0.65
VAPB-204ENST00000475243 CNOT6Q9ULM6 557 aaKnown RBP11□□□□□ -0.65
VAPB-204ENST00000475243 A0A087WXM4 84 aa11□□□□□ -0.65
VAPB-204ENST00000475243 IQCF5A8MTL0 148 aa11□□□□□ -0.65
VAPB-204ENST00000475243 MSCO60682 206 aa11□□□□□ -0.65
VAPB-204ENST00000475243 MATKP42679 507 aa11□□□□□ -0.65
VAPB-204ENST00000475243 RHBDF2Q6PJF5 856 aa11□□□□□ -0.65
VAPB-204ENST00000475243 NPAS2Q99743 824 aa11□□□□□ -0.65
VAPB-204ENST00000475243 AARSD1Q9BTE6 412 aaKnown RBP11□□□□□ -0.65
VAPB-204ENST00000475243 ADAM28Q9UKQ2 775 aa11□□□□□ -0.65
VAPB-204ENST00000475243 NPEPPSL1A6NEC2 478 aa11□□□□□ -0.65
VAPB-204ENST00000475243 MDM4O15151 490 aa11□□□□□ -0.65
VAPB-204ENST00000475243 TCEA1P23193 301 aaKnown RBP11□□□□□ -0.65
VAPB-204ENST00000475243 AQP1P29972 269 aa11□□□□□ -0.65
VAPB-204ENST00000475243 RPL9P32969 192 aaKnown RBP11□□□□□ -0.65
VAPB-204ENST00000475243 PYDC2Q56P42 97 aa11□□□□□ -0.65
VAPB-204ENST00000475243 SLCO1B3Q9NPD5 702 aa11□□□□□ -0.65
VAPB-204ENST00000475243 SNX15Q9NRS6 342 aa11□□□□□ -0.65
VAPB-204ENST00000475243 MCUBQ9NWR8 336 aa11□□□□□ -0.65
VAPB-204ENST00000475243 LEF1Q9UJU2 399 aaPredicted RBP11□□□□□ -0.65
VAPB-204ENST00000475243 RAB21Q9UL25 225 aa11□□□□□ -0.65
VAPB-204ENST00000475243 LIN7AO14910 233 aaPredicted RBP10.99□□□□□ -0.65
VAPB-204ENST00000475243 CABYRO75952 493 aa10.99□□□□□ -0.65
VAPB-204ENST00000475243 PDE9AO76083 593 aa10.99□□□□□ -0.65
VAPB-204ENST00000475243 SLC6A2P23975 617 aa10.99□□□□□ -0.65
VAPB-204ENST00000475243 CYP2C18P33260 490 aa10.99□□□□□ -0.65
VAPB-204ENST00000475243 LYPLAL1Q5VWZ2 237 aa10.99□□□□□ -0.65
VAPB-204ENST00000475243 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.99□□□□□ -0.65
VAPB-204ENST00000475243 CMC1Q7Z7K0 106 aa10.99□□□□□ -0.65
VAPB-204ENST00000475243 APLFQ8IW19 511 aaPredicted RBP10.99□□□□□ -0.65
VAPB-204ENST00000475243 MKL1Q969V6 931 aa10.99□□□□□ -0.65
VAPB-204ENST00000475243 DNAJC19Q96DA6 116 aa10.99□□□□□ -0.65
VAPB-204ENST00000475243 SLC38A2Q96QD8 506 aa10.99□□□□□ -0.65
VAPB-204ENST00000475243 KIDINS220Q9ULH0 1771 aa10.99□□□□□ -0.65
VAPB-204ENST00000475243 C2orf71A6NGG8 1288 aa10.99□□□□□ -0.65
VAPB-204ENST00000475243 DBTP11182 482 aaKnown RBP10.99□□□□□ -0.65
VAPB-204ENST00000475243 CCNA2P20248 432 aa10.99□□□□□ -0.65
VAPB-204ENST00000475243 TNK2Q07912 1038 aa10.99□□□□□ -0.65
VAPB-204ENST00000475243 BST1Q10588 318 aa10.99□□□□□ -0.65
VAPB-204ENST00000475243 TMPRSS11BQ86T26 416 aa10.99□□□□□ -0.65
VAPB-204ENST00000475243 CERS5Q8N5B7 392 aa10.99□□□□□ -0.65
VAPB-204ENST00000475243 ZNF354BQ96LW1 612 aa10.99□□□□□ -0.65
VAPB-204ENST00000475243 DUSP16Q9BY84 665 aa10.99□□□□□ -0.65
VAPB-204ENST00000475243 PCYOX1Q9UHG3 505 aa10.99□□□□□ -0.65
VAPB-204ENST00000475243 SLC27A6Q9Y2P4 619 aa10.99□□□□□ -0.65
VAPB-204ENST00000475243 SAMHD1Q9Y3Z3 626 aaKnown RBP10.99□□□□□ -0.65
VAPB-204ENST00000475243 SPATA31C2B4DYI2 1134 aa10.99□□□□□ -0.65
VAPB-204ENST00000475243 LYPLA1O75608 230 aaPredicted RBP10.99□□□□□ -0.65
VAPB-204ENST00000475243 HNMTP50135 292 aa10.99□□□□□ -0.65
VAPB-204ENST00000475243 FBXL16Q8N461 479 aa10.99□□□□□ -0.65
VAPB-204ENST00000475243 HJURPQ8NCD3 748 aaPredicted RBP10.99□□□□□ -0.65
VAPB-204ENST00000475243 OR7A2PQ8NGA2 310 aa10.99□□□□□ -0.65
VAPB-204ENST00000475243 PPP3R2Q96LZ3 170 aa10.99□□□□□ -0.65
VAPB-204ENST00000475243 ABCG4Q9H172 646 aa10.99□□□□□ -0.65
VAPB-204ENST00000475243 PTPN5P54829 565 aa10.99□□□□□ -0.65
VAPB-204ENST00000475243 PSME3P61289 254 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms