RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 PCCBP05166 539 aa20.47■□□□□ 0.87
PDLIM4-206ENST00000474421 IL1R2P27930 398 aa20.47■□□□□ 0.87
PDLIM4-206ENST00000474421 SERPINB6P35237 376 aa20.47■□□□□ 0.87
PDLIM4-206ENST00000474421 PBX1P40424 430 aa20.47■□□□□ 0.87
PDLIM4-206ENST00000474421 LSSP48449 732 aa20.47■□□□□ 0.87
PDLIM4-206ENST00000474421 SMTNL2Q2TAL5 461 aa20.47■□□□□ 0.87
PDLIM4-206ENST00000474421 ENPP7Q6UWV6 458 aa20.47■□□□□ 0.87
PDLIM4-206ENST00000474421 LUZP1Q86V48 1076 aa20.47■□□□□ 0.87
PDLIM4-206ENST00000474421 SLC35F3Q8IY50 421 aa20.47■□□□□ 0.87
PDLIM4-206ENST00000474421 NSMCE1Q8WV22 266 aa20.47■□□□□ 0.87
PDLIM4-206ENST00000474421 SPOCK2Q92563 424 aa20.47■□□□□ 0.87
PDLIM4-206ENST00000474421 WDR92Q96MX6 357 aa20.47■□□□□ 0.87
PDLIM4-206ENST00000474421 CLPBQ9H078 707 aa20.47■□□□□ 0.87
PDLIM4-206ENST00000474421 KLQ9UEF7 1012 aa20.47■□□□□ 0.87
PDLIM4-206ENST00000474421 IGSF10Q6WRI0 2623 aa20.46■□□□□ 0.87
PDLIM4-206ENST00000474421 TRAFD1O14545 582 aaPredicted RBP20.46■□□□□ 0.87
PDLIM4-206ENST00000474421 MUSKO15146 869 aa20.46■□□□□ 0.87
PDLIM4-206ENST00000474421 SOCS5O75159 536 aa20.46■□□□□ 0.87
PDLIM4-206ENST00000474421 DXOO77932 396 aaKnown RBP20.46■□□□□ 0.87
PDLIM4-206ENST00000474421 PRKCGP05129 697 aa20.46■□□□□ 0.87
PDLIM4-206ENST00000474421 TGM2P21980 687 aa20.46■□□□□ 0.87
PDLIM4-206ENST00000474421 AMPD1P23109 780 aa20.46■□□□□ 0.87
PDLIM4-206ENST00000474421 KELP23276 732 aa20.46■□□□□ 0.87
PDLIM4-206ENST00000474421 SRP54P61011 504 aaKnown RBP20.46■□□□□ 0.87
PDLIM4-206ENST00000474421 GABREP78334 506 aa20.46■□□□□ 0.87
PDLIM4-206ENST00000474421 SLC10A7Q0GE19 358 aa20.46■□□□□ 0.87
PDLIM4-206ENST00000474421 ISXQ2M1V0 245 aa20.46■□□□□ 0.87
PDLIM4-206ENST00000474421 ALG11Q2TAA5 492 aa20.46■□□□□ 0.87
PDLIM4-206ENST00000474421 RALGPS1Q5JS13 557 aa20.46■□□□□ 0.87
PDLIM4-206ENST00000474421 LIPIQ6XZB0 460 aa20.46■□□□□ 0.87
PDLIM4-206ENST00000474421 RBM44Q6ZP01 1051 aaKnown RBP20.46■□□□□ 0.87
PDLIM4-206ENST00000474421 DPPA4Q7L190 304 aa20.46■□□□□ 0.87
PDLIM4-206ENST00000474421 GKN2Q86XP6 184 aa20.46■□□□□ 0.87
PDLIM4-206ENST00000474421 ARL10Q8N8L6 244 aa20.46■□□□□ 0.87
PDLIM4-206ENST00000474421 TSACCQ96A04 125 aaPredicted RBP20.46■□□□□ 0.87
PDLIM4-206ENST00000474421 CSPG4P5Q96PW8 444 aa20.46■□□□□ 0.87
PDLIM4-206ENST00000474421 THAP2Q9H0W7 228 aa20.46■□□□□ 0.87
PDLIM4-206ENST00000474421 POLR1BQ9H9Y6 1135 aa20.46■□□□□ 0.87
PDLIM4-206ENST00000474421 KCTD5Q9NXV2 234 aa20.46■□□□□ 0.87
PDLIM4-206ENST00000474421 ANAPC7Q9UJX3 599 aa20.46■□□□□ 0.87
PDLIM4-206ENST00000474421 PADI4Q9UM07 663 aa20.46■□□□□ 0.87
PDLIM4-206ENST00000474421 CAPN11Q9UMQ6 739 aa20.46■□□□□ 0.87
PDLIM4-206ENST00000474421 LUC7L2Q9Y383 392 aaKnown RBP20.46■□□□□ 0.87
PDLIM4-206ENST00000474421 OR1A2Q9Y585 309 aa20.46■□□□□ 0.87
PDLIM4-206ENST00000474421 LRP4O75096 1905 aa20.45■□□□□ 0.86
PDLIM4-206ENST00000474421 CACNB4O00305 520 aaPredicted RBP20.45■□□□□ 0.86
PDLIM4-206ENST00000474421 RECQL5O94762 991 aaPredicted RBP20.45■□□□□ 0.86
PDLIM4-206ENST00000474421 TNFP01375 233 aa20.45■□□□□ 0.86
PDLIM4-206ENST00000474421 HOXC4P09017 264 aaPredicted RBP20.45■□□□□ 0.86
PDLIM4-206ENST00000474421 RARAP10276 462 aa20.45■□□□□ 0.86
PDLIM4-206ENST00000474421 KIAA1024LP59773 190 aa20.45■□□□□ 0.86
PDLIM4-206ENST00000474421 ERVPABLB-1P60509 514 aa20.45■□□□□ 0.86
PDLIM4-206ENST00000474421 RALGDSQ12967 914 aa20.45■□□□□ 0.86
PDLIM4-206ENST00000474421 LRRC49Q8IUZ0 686 aa20.45■□□□□ 0.86
PDLIM4-206ENST00000474421 ATPAF2Q8N5M1 289 aa20.45■□□□□ 0.86
PDLIM4-206ENST00000474421 NUDCD1Q96RS6 583 aa20.45■□□□□ 0.86
PDLIM4-206ENST00000474421 NUP85Q9BW27 656 aa20.45■□□□□ 0.86
PDLIM4-206ENST00000474421 RCOR3Q9P2K3 495 aaPredicted RBP20.45■□□□□ 0.86
PDLIM4-206ENST00000474421 DGKBQ9Y6T7 804 aa20.45■□□□□ 0.86
PDLIM4-206ENST00000474421 MYO1FO00160 1098 aa20.44■□□□□ 0.86
PDLIM4-206ENST00000474421 HTRA2O43464 458 aaPredicted RBP20.44■□□□□ 0.86
PDLIM4-206ENST00000474421 MPOP05164 745 aa20.44■□□□□ 0.86
PDLIM4-206ENST00000474421 CYP1A2P05177 515 aa20.44■□□□□ 0.86
PDLIM4-206ENST00000474421 HOXB3P14651 431 aaPredicted RBP20.44■□□□□ 0.86
PDLIM4-206ENST00000474421 TCF4P15884 667 aa20.44■□□□□ 0.86
PDLIM4-206ENST00000474421 ITPKBP27987 946 aa20.44■□□□□ 0.86
PDLIM4-206ENST00000474421 CDH6P55285 790 aa20.44■□□□□ 0.86
PDLIM4-206ENST00000474421 PCBP4P57723 403 aaKnown RBP20.44■□□□□ 0.86
PDLIM4-206ENST00000474421 KRT81Q14533 505 aa20.44■□□□□ 0.86
PDLIM4-206ENST00000474421 NFKBIBQ15653 356 aa20.44■□□□□ 0.86
PDLIM4-206ENST00000474421 RD3Q7Z3Z2 195 aa20.44■□□□□ 0.86
PDLIM4-206ENST00000474421 TP53INP2Q8IXH6 220 aa20.44■□□□□ 0.86
PDLIM4-206ENST00000474421 ZNF248Q8NDW4 579 aa20.44■□□□□ 0.86
PDLIM4-206ENST00000474421 OR6C4Q8NGE1 309 aa20.44■□□□□ 0.86
PDLIM4-206ENST00000474421 CPLX3Q8WVH0 158 aa20.44■□□□□ 0.86
PDLIM4-206ENST00000474421 PCDH18Q9HCL0 1135 aa20.44■□□□□ 0.86
PDLIM4-206ENST00000474421 ETNK2Q9NVF9 386 aa20.44■□□□□ 0.86
PDLIM4-206ENST00000474421 GULP1Q9UBP9 304 aa20.44■□□□□ 0.86
PDLIM4-206ENST00000474421 SHROOM3Q8TF72 1996 aa20.44■□□□□ 0.86
PDLIM4-206ENST00000474421 PTPRQQ9UMZ3 2332 aa20.43■□□□□ 0.86
PDLIM4-206ENST00000474421 PDE2AO00408 941 aaPredicted RBP20.43■□□□□ 0.86
PDLIM4-206ENST00000474421 TNFRSF10CO14798 259 aa20.43■□□□□ 0.86
PDLIM4-206ENST00000474421 MAFKO60675 156 aa20.43■□□□□ 0.86
PDLIM4-206ENST00000474421 PEX11BO96011 259 aa20.43■□□□□ 0.86
PDLIM4-206ENST00000474421 PTMSP20962 102 aa20.43■□□□□ 0.86
PDLIM4-206ENST00000474421 SLC25A11Q02978 314 aaKnown RBP20.43■□□□□ 0.86
PDLIM4-206ENST00000474421 HADHQ16836 314 aaKnown RBP20.43■□□□□ 0.86
PDLIM4-206ENST00000474421 SOWAHCQ53LP3 525 aaPredicted RBP20.43■□□□□ 0.86
PDLIM4-206ENST00000474421 PERM1Q5SV97 790 aa20.43■□□□□ 0.86
PDLIM4-206ENST00000474421 ALKBH5Q6P6C2 394 aaKnown RBP20.43■□□□□ 0.86
PDLIM4-206ENST00000474421 IGF2-ASQ6U949 168 aa20.43■□□□□ 0.86
PDLIM4-206ENST00000474421 OR56A4Q8NGH8 313 aa20.43■□□□□ 0.86
PDLIM4-206ENST00000474421 PCDH19Q8TAB3 1148 aa20.43■□□□□ 0.86
PDLIM4-206ENST00000474421 RBM15Q96T37 977 aaKnown RBP eCLIP20.43■□□□□ 0.86
PDLIM4-206ENST00000474421 CCDC3Q9BQI4 270 aa20.43■□□□□ 0.86
PDLIM4-206ENST00000474421 MGME1Q9BQP7 344 aa20.43■□□□□ 0.86
PDLIM4-206ENST00000474421 THSD1Q9NS62 852 aa20.43■□□□□ 0.86
PDLIM4-206ENST00000474421 GPR34Q9UPC5 381 aa20.43■□□□□ 0.86
PDLIM4-206ENST00000474421 A0A087X0T9 212 aa20.42■□□□□ 0.86
PDLIM4-206ENST00000474421 TPM3P06753 285 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms