RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 HTATIP2Q9BUP3 242 aa18.08■□□□□ 0.49
VARS2-206ENST00000473916 DCTN4Q9UJW0 460 aa18.08■□□□□ 0.49
VARS2-206ENST00000473916 WNT6Q9Y6F9 365 aa18.08■□□□□ 0.49
VARS2-206ENST00000473916 ATXN2Q99700 1313 aaKnown RBP18.08■□□□□ 0.48
VARS2-206ENST00000473916 UNC80Q8N2C7 3258 aa18.08■□□□□ 0.48
VARS2-206ENST00000473916 TRIM24O15164 1050 aa18.08■□□□□ 0.48
VARS2-206ENST00000473916 XYLBO75191 536 aa18.08■□□□□ 0.48
VARS2-206ENST00000473916 PIGNO95427 931 aa18.08■□□□□ 0.48
VARS2-206ENST00000473916 HNRNPA1P09651 372 aaKnown RBP eCLIP18.08■□□□□ 0.48
VARS2-206ENST00000473916 FGF3P11487 239 aaPredicted RBP18.08■□□□□ 0.48
VARS2-206ENST00000473916 SP100P23497 879 aaPredicted RBP18.08■□□□□ 0.48
VARS2-206ENST00000473916 DLG1Q12959 904 aa18.08■□□□□ 0.48
VARS2-206ENST00000473916 ZNF77Q15935 545 aa18.08■□□□□ 0.48
VARS2-206ENST00000473916 FUT11Q495W5 492 aa18.08■□□□□ 0.48
VARS2-206ENST00000473916 CCDC121Q6ZUS5 278 aa18.08■□□□□ 0.48
VARS2-206ENST00000473916 TRPM8Q7Z2W7 1104 aa18.08■□□□□ 0.48
VARS2-206ENST00000473916 CAMK1DQ8IU85 385 aa18.08■□□□□ 0.48
VARS2-206ENST00000473916 CENPLQ8N0S6 344 aaPredicted RBP18.08■□□□□ 0.48
VARS2-206ENST00000473916 OR4K2Q8NGD2 314 aa18.08■□□□□ 0.48
VARS2-206ENST00000473916 LRRC3BQ96PB8 259 aa18.08■□□□□ 0.48
VARS2-206ENST00000473916 KIAA1522Q9P206 1035 aaPredicted RBP18.08■□□□□ 0.48
VARS2-206ENST00000473916 EVLQ9UI08 416 aaPredicted RBP18.08■□□□□ 0.48
VARS2-206ENST00000473916 CDH22Q9UJ99 828 aa18.08■□□□□ 0.48
VARS2-206ENST00000473916 KLF11O14901 512 aa18.07■□□□□ 0.48
VARS2-206ENST00000473916 LYPLA1O75608 230 aaPredicted RBP18.07■□□□□ 0.48
VARS2-206ENST00000473916 RPP40O75818 363 aaKnown RBP18.07■□□□□ 0.48
VARS2-206ENST00000473916 S1PR4O95977 384 aa18.07■□□□□ 0.48
VARS2-206ENST00000473916 DDX6P26196 483 aaKnown RBP eCLIP18.07■□□□□ 0.48
VARS2-206ENST00000473916 GLRBP48167 497 aa18.07■□□□□ 0.48
VARS2-206ENST00000473916 LEPRP48357 1165 aaKnown RBP18.07■□□□□ 0.48
VARS2-206ENST00000473916 ERVK-21P61565 698 aa18.07■□□□□ 0.48
VARS2-206ENST00000473916 NSUN2Q08J23 767 aaKnown RBP eCLIP18.07■□□□□ 0.48
VARS2-206ENST00000473916 INSCQ1MX18 579 aa18.07■□□□□ 0.48
VARS2-206ENST00000473916 PITRM1Q5JRX3 1037 aa18.07■□□□□ 0.48
VARS2-206ENST00000473916 DGKKQ5KSL6 1271 aa18.07■□□□□ 0.48
VARS2-206ENST00000473916 TMC5Q6UXY8 1006 aa18.07■□□□□ 0.48
VARS2-206ENST00000473916 NLRP9Q7RTR0 991 aa18.07■□□□□ 0.48
VARS2-206ENST00000473916 YTHDF3Q7Z739 585 aaKnown RBP18.07■□□□□ 0.48
VARS2-206ENST00000473916 ARID3BQ8IVW6 561 aaPredicted RBP18.07■□□□□ 0.48
VARS2-206ENST00000473916 CPSF2Q9P2I0 782 aaKnown RBP18.07■□□□□ 0.48
VARS2-206ENST00000473916 COPG2Q9UBF2 871 aa18.07■□□□□ 0.48
VARS2-206ENST00000473916 PCDHB9Q9Y5E1 797 aa18.07■□□□□ 0.48
VARS2-206ENST00000473916 ANKRD66B4E2M5 251 aa18.06■□□□□ 0.48
VARS2-206ENST00000473916 TK2O00142 265 aa18.06■□□□□ 0.48
VARS2-206ENST00000473916 BIRC5O15392 142 aa18.06■□□□□ 0.48
VARS2-206ENST00000473916 ITM2AO43736 263 aa18.06■□□□□ 0.48
VARS2-206ENST00000473916 FGF19O95750 216 aa18.06■□□□□ 0.48
VARS2-206ENST00000473916 CYBBP04839 570 aa18.06■□□□□ 0.48
VARS2-206ENST00000473916 CTPS1P17812 591 aa18.06■□□□□ 0.48
VARS2-206ENST00000473916 ARRB2P32121 409 aa18.06■□□□□ 0.48
VARS2-206ENST00000473916 ARMC3Q5W041 872 aa18.06■□□□□ 0.48
VARS2-206ENST00000473916 RETSATQ6NUM9 610 aa18.06■□□□□ 0.48
VARS2-206ENST00000473916 FITM2Q8N6M3 262 aa18.06■□□□□ 0.48
VARS2-206ENST00000473916 VN1R2Q8NFZ6 395 aa18.06■□□□□ 0.48
VARS2-206ENST00000473916 CALML6Q8TD86 181 aa18.06■□□□□ 0.48
VARS2-206ENST00000473916 GDPD5Q8WTR4 605 aa18.06■□□□□ 0.48
VARS2-206ENST00000473916 BBS2Q9BXC9 721 aa18.06■□□□□ 0.48
VARS2-206ENST00000473916 BPIFA1Q9NP55 256 aa18.06■□□□□ 0.48
VARS2-206ENST00000473916 ACSS2Q9NR19 701 aa18.06■□□□□ 0.48
VARS2-206ENST00000473916 KLHL14Q9P2G3 628 aa18.06■□□□□ 0.48
VARS2-206ENST00000473916 FNDC3AQ9Y2H6 1198 aaKnown RBP18.06■□□□□ 0.48
VARS2-206ENST00000473916 CRYL1Q9Y2S2 319 aa18.06■□□□□ 0.48
VARS2-206ENST00000473916 ARIH1Q9Y4X5 557 aaPredicted RBP18.06■□□□□ 0.48
VARS2-206ENST00000473916 NUMBLQ9Y6R0 609 aa18.06■□□□□ 0.48
VARS2-206ENST00000473916 EPOPA6NHQ4 379 aa18.06■□□□□ 0.48
VARS2-206ENST00000473916 CES1P23141 567 aa18.06■□□□□ 0.48
VARS2-206ENST00000473916 CORO7P57737 925 aa18.06■□□□□ 0.48
VARS2-206ENST00000473916 RAB10P61026 200 aa18.06■□□□□ 0.48
VARS2-206ENST00000473916 OCRLQ01968 901 aa18.06■□□□□ 0.48
VARS2-206ENST00000473916 KIAA0408Q6ZU52 694 aa18.06■□□□□ 0.48
VARS2-206ENST00000473916 STYXQ8WUJ0 223 aa18.06■□□□□ 0.48
VARS2-206ENST00000473916 MOCOSQ96EN8 888 aa18.06■□□□□ 0.48
VARS2-206ENST00000473916 CDKN2AIPNLQ96HQ2 116 aa18.06■□□□□ 0.48
VARS2-206ENST00000473916 POLR3BQ9NW08 1133 aaPredicted RBP18.06■□□□□ 0.48
VARS2-206ENST00000473916 TLK1Q9UKI8 766 aa18.06■□□□□ 0.48
VARS2-206ENST00000473916 NUP210Q8TEM1 1887 aaPredicted RBP18.06■□□□□ 0.48
VARS2-206ENST00000473916 G3V2L1 256 aa18.05■□□□□ 0.48
VARS2-206ENST00000473916 CD3EAPO15446 510 aaKnown RBP18.05■□□□□ 0.48
VARS2-206ENST00000473916 FZD6O60353 706 aa18.05■□□□□ 0.48
VARS2-206ENST00000473916 UBOX5O94941 541 aa18.05■□□□□ 0.48
VARS2-206ENST00000473916 PENKP01210 267 aaPredicted RBP18.05■□□□□ 0.48
VARS2-206ENST00000473916 ALPIP09923 528 aa18.05■□□□□ 0.48
VARS2-206ENST00000473916 SBK3P0C264 359 aa18.05■□□□□ 0.48
VARS2-206ENST00000473916 STMN1P16949 149 aa18.05■□□□□ 0.48
VARS2-206ENST00000473916 NRIP1P48552 1158 aa18.05■□□□□ 0.48
VARS2-206ENST00000473916 CDKN1CP49918 316 aaPredicted RBP18.05■□□□□ 0.48
VARS2-206ENST00000473916 CDKN2DP55273 166 aa18.05■□□□□ 0.48
VARS2-206ENST00000473916 USP4Q13107 963 aa18.05■□□□□ 0.48
VARS2-206ENST00000473916 LY6G5CQ5SRR4 150 aa18.05■□□□□ 0.48
VARS2-206ENST00000473916 RTL10Q7L3V2 364 aa18.05■□□□□ 0.48
VARS2-206ENST00000473916 TMEM151AQ8N4L1 468 aa18.05■□□□□ 0.48
VARS2-206ENST00000473916 ACDQ96AP0 544 aa18.05■□□□□ 0.48
VARS2-206ENST00000473916 VOPP1Q96AW1 172 aa18.05■□□□□ 0.48
VARS2-206ENST00000473916 RSPRY1Q96DX4 576 aa18.05■□□□□ 0.48
VARS2-206ENST00000473916 KCNK13Q9HB14 408 aa18.05■□□□□ 0.48
VARS2-206ENST00000473916 NMRAL1Q9HBL8 299 aa18.05■□□□□ 0.48
VARS2-206ENST00000473916 NLE1Q9NVX2 485 aaPredicted RBP18.05■□□□□ 0.48
VARS2-206ENST00000473916 ZDHHC7Q9NXF8 308 aa18.05■□□□□ 0.48
VARS2-206ENST00000473916 MARCOQ9UEW3 520 aaPredicted RBP18.05■□□□□ 0.48
VARS2-206ENST00000473916 MRPS23Q9Y3D9 190 aaKnown RBP18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms