RNA–Protein interactions for RNA: ENST00000473376.1

CHD3-209, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-209ENST00000473376 MYBL1P10243 752 aa13.62□□□□□ -0.23
CHD3-209ENST00000473376 GLB1P16278 677 aa13.62□□□□□ -0.23
CHD3-209ENST00000473376 PSMA2P25787 234 aa13.62□□□□□ -0.23
CHD3-209ENST00000473376 TEAD1P28347 426 aa13.62□□□□□ -0.23
CHD3-209ENST00000473376 PCK1P35558 622 aa13.62□□□□□ -0.23
CHD3-209ENST00000473376 PRKCIP41743 596 aa13.62□□□□□ -0.23
CHD3-209ENST00000473376 PAPOLAP51003 745 aaKnown RBP13.62□□□□□ -0.23
CHD3-209ENST00000473376 OGDHQ02218 1023 aa13.62□□□□□ -0.23
CHD3-209ENST00000473376 BCL2L1Q07817 233 aa13.62□□□□□ -0.23
CHD3-209ENST00000473376 C1orf61Q13536 156 aa13.62□□□□□ -0.23
CHD3-209ENST00000473376 PEX6Q13608 980 aa13.62□□□□□ -0.23
CHD3-209ENST00000473376 C3orf38Q5JPI3 329 aa13.62□□□□□ -0.23
CHD3-209ENST00000473376 INO80CQ6PI98 192 aaPredicted RBP13.62□□□□□ -0.23
CHD3-209ENST00000473376 ENPP7Q6UWV6 458 aa13.62□□□□□ -0.23
CHD3-209ENST00000473376 CAMK1DQ8IU85 385 aa13.62□□□□□ -0.23
CHD3-209ENST00000473376 HID1Q8IV36 788 aa13.62□□□□□ -0.23
CHD3-209ENST00000473376 GPR156Q8NFN8 814 aa13.62□□□□□ -0.23
CHD3-209ENST00000473376 TRIM11Q96F44 468 aa13.62□□□□□ -0.23
CHD3-209ENST00000473376 SLC39A8Q9C0K1 460 aa13.62□□□□□ -0.23
CHD3-209ENST00000473376 MRPL47Q9HD33 250 aaKnown RBP13.62□□□□□ -0.23
CHD3-209ENST00000473376 SEPT3Q9UH03 358 aa13.62□□□□□ -0.23
CHD3-209ENST00000473376 SCINQ9Y6U3 715 aa13.62□□□□□ -0.23
CHD3-209ENST00000473376 GCN1Q92616 2671 aaKnown RBP13.61□□□□□ -0.23
CHD3-209ENST00000473376 A0A1W2PQC6 194 aa13.61□□□□□ -0.23
CHD3-209ENST00000473376 TRAFD1O14545 582 aaPredicted RBP13.61□□□□□ -0.23
CHD3-209ENST00000473376 PLD2O14939 933 aa13.61□□□□□ -0.23
CHD3-209ENST00000473376 ZW10O43264 779 aa13.61□□□□□ -0.23
CHD3-209ENST00000473376 DAPK3O43293 454 aa13.61□□□□□ -0.23
CHD3-209ENST00000473376 NUDT21O43809 227 aaKnown RBP13.61□□□□□ -0.23
CHD3-209ENST00000473376 PRPSAP2O60256 369 aa13.61□□□□□ -0.23
CHD3-209ENST00000473376 PIGNO95427 931 aa13.61□□□□□ -0.23
CHD3-209ENST00000473376 ERCC2P18074 760 aa13.61□□□□□ -0.23
CHD3-209ENST00000473376 ITIH2P19823 946 aa13.61□□□□□ -0.23
CHD3-209ENST00000473376 PDX1P52945 283 aa13.61□□□□□ -0.23
CHD3-209ENST00000473376 CFHR1Q03591 330 aa13.61□□□□□ -0.23
CHD3-209ENST00000473376 RALGDSQ12967 914 aa13.61□□□□□ -0.23
CHD3-209ENST00000473376 BOLA3Q53S33 107 aa13.61□□□□□ -0.23
CHD3-209ENST00000473376 PCSK4Q6UW60 755 aa13.61□□□□□ -0.23
CHD3-209ENST00000473376 LIPIQ6XZB0 460 aa13.61□□□□□ -0.23
CHD3-209ENST00000473376 DPPA4Q7L190 304 aa13.61□□□□□ -0.23
CHD3-209ENST00000473376 LRRC49Q8IUZ0 686 aa13.61□□□□□ -0.23
CHD3-209ENST00000473376 ARHGAP12Q8IWW6 846 aa13.61□□□□□ -0.23
CHD3-209ENST00000473376 RAVER1Q8IY67 606 aaKnown RBP13.61□□□□□ -0.23
CHD3-209ENST00000473376 ZNF843Q8N446 348 aa13.61□□□□□ -0.23
CHD3-209ENST00000473376 ARFGAP1Q8N6T3 406 aa13.61□□□□□ -0.23
CHD3-209ENST00000473376 TSEN2Q8NCE0 465 aaKnown RBP13.61□□□□□ -0.23
CHD3-209ENST00000473376 OR56A4Q8NGH8 313 aa13.61□□□□□ -0.23
CHD3-209ENST00000473376 PCDH19Q8TAB3 1148 aa13.61□□□□□ -0.23
CHD3-209ENST00000473376 GFM1Q96RP9 751 aaKnown RBP13.61□□□□□ -0.23
CHD3-209ENST00000473376 CINPQ9BW66 212 aaPredicted RBP13.61□□□□□ -0.23
CHD3-209ENST00000473376 DHX35Q9H5Z1 703 aaKnown RBP13.61□□□□□ -0.23
CHD3-209ENST00000473376 CAAP1Q9H8G2 361 aa13.61□□□□□ -0.23
CHD3-209ENST00000473376 ZWILCHQ9H900 591 aa13.61□□□□□ -0.23
CHD3-209ENST00000473376 GPR34Q9UPC5 381 aa13.61□□□□□ -0.23
CHD3-209ENST00000473376 COL27A1Q8IZC6 1860 aaPredicted RBP13.61□□□□□ -0.23
CHD3-209ENST00000473376 SHROOM3Q8TF72 1996 aa13.6□□□□□ -0.23
CHD3-209ENST00000473376 D6RAR5 112 aa13.6□□□□□ -0.23
CHD3-209ENST00000473376 PSMD11O00231 422 aa13.6□□□□□ -0.23
CHD3-209ENST00000473376 NVLO15381 856 aaKnown RBP13.6□□□□□ -0.23
CHD3-209ENST00000473376 HTRA2O43464 458 aaPredicted RBP13.6□□□□□ -0.23
CHD3-209ENST00000473376 RECQL5O94762 991 aaPredicted RBP13.6□□□□□ -0.23
CHD3-209ENST00000473376 TNFSF15O95150 251 aa13.6□□□□□ -0.23
CHD3-209ENST00000473376 ELFN1P0C7U0 828 aa13.6□□□□□ -0.23
CHD3-209ENST00000473376 ZFP36L1Q07352 338 aaKnown RBP13.6□□□□□ -0.23
CHD3-209ENST00000473376 DPYSQ14117 519 aa13.6□□□□□ -0.23
CHD3-209ENST00000473376 DPYSL2Q16555 572 aa13.6□□□□□ -0.23
CHD3-209ENST00000473376 LRRC73Q5JTD7 316 aa13.6□□□□□ -0.23
CHD3-209ENST00000473376 CERCAMQ5T4B2 595 aa13.6□□□□□ -0.23
CHD3-209ENST00000473376 CCDC183Q5T5S1 534 aa13.6□□□□□ -0.23
CHD3-209ENST00000473376 ZNF605Q86T29 641 aa13.6□□□□□ -0.23
CHD3-209ENST00000473376 CBARPQ8N350 705 aaPredicted RBP13.6□□□□□ -0.23
CHD3-209ENST00000473376 TTC9Q92623 222 aa13.6□□□□□ -0.23
CHD3-209ENST00000473376 TSACCQ96A04 125 aaPredicted RBP13.6□□□□□ -0.23
CHD3-209ENST00000473376 EXOC2Q96KP1 924 aa13.6□□□□□ -0.23
CHD3-209ENST00000473376 SNRNP25Q9BV90 132 aaKnown RBP13.6□□□□□ -0.23
CHD3-209ENST00000473376 LRRN3Q9H3W5 708 aa13.6□□□□□ -0.23
CHD3-209ENST00000473376 SP110Q9HB58 689 aa13.6□□□□□ -0.23
CHD3-209ENST00000473376 RTN4Q9NQC3 1192 aaKnown RBP13.6□□□□□ -0.23
CHD3-209ENST00000473376 ATXN7L1Q9ULK2 861 aaPredicted RBP13.6□□□□□ -0.23
CHD3-209ENST00000473376 MGAQ8IWI9 3026 aa13.59□□□□□ -0.23
CHD3-209ENST00000473376 SMTNL1A8MU46 457 aa13.59□□□□□ -0.23
CHD3-209ENST00000473376 FTLP02792 175 aaPredicted RBP13.59□□□□□ -0.23
CHD3-209ENST00000473376 CD82P27701 267 aa13.59□□□□□ -0.23
CHD3-209ENST00000473376 MIPP30301 263 aa13.59□□□□□ -0.23
CHD3-209ENST00000473376 INHBCP55103 352 aa13.59□□□□□ -0.23
CHD3-209ENST00000473376 FILIP1LQ4L180 1135 aa13.59□□□□□ -0.23
CHD3-209ENST00000473376 TAF1BQ53T94 588 aaPredicted RBP13.59□□□□□ -0.23
CHD3-209ENST00000473376 FIGNQ5HY92 759 aa13.59□□□□□ -0.23
CHD3-209ENST00000473376 PNCKQ6P2M8 343 aa13.59□□□□□ -0.23
CHD3-209ENST00000473376 CYP4V2Q6ZWL3 525 aaPredicted RBP13.59□□□□□ -0.23
CHD3-209ENST00000473376 RAB11FIP2Q7L804 512 aa13.59□□□□□ -0.23
CHD3-209ENST00000473376 NLRP8Q86W28 1048 aa13.59□□□□□ -0.23
CHD3-209ENST00000473376 C17orf82Q86X59 251 aaPredicted RBP13.59□□□□□ -0.23
CHD3-209ENST00000473376 ZSWIM9Q86XI8 627 aa13.59□□□□□ -0.23
CHD3-209ENST00000473376 BBS5Q8N3I7 341 aa13.59□□□□□ -0.23
CHD3-209ENST00000473376 KYQ8NBH2 561 aa13.59□□□□□ -0.23
CHD3-209ENST00000473376 KIAA1524Q8TCG1 905 aa13.59□□□□□ -0.23
CHD3-209ENST00000473376 FUBP1Q96AE4 644 aaKnown RBP13.59□□□□□ -0.23
CHD3-209ENST00000473376 CCDC74AQ96AQ1 378 aa13.59□□□□□ -0.23
CHD3-209ENST00000473376 CELF6Q96J87 481 aaKnown RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms