RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 SKOR1P84550 965 aa13.2□□□□□ -0.3
TPM3-216ENST00000473036 GRIK2Q13002 908 aa13.2□□□□□ -0.3
TPM3-216ENST00000473036 GRM3Q14832 879 aa13.2□□□□□ -0.3
TPM3-216ENST00000473036 TMEM52BQ4KMG9 183 aa13.2□□□□□ -0.3
TPM3-216ENST00000473036 NEK5Q6P3R8 708 aa13.2□□□□□ -0.3
TPM3-216ENST00000473036 PIP4P1Q86T03 277 aa13.2□□□□□ -0.3
TPM3-216ENST00000473036 UBL4BQ8N7F7 174 aa13.2□□□□□ -0.3
TPM3-216ENST00000473036 TMEM145Q8NBT3 493 aa13.2□□□□□ -0.3
TPM3-216ENST00000473036 NSMCE1Q8WV22 266 aa13.2□□□□□ -0.3
TPM3-216ENST00000473036 PIH1D2Q8WWB5 315 aa13.2□□□□□ -0.3
TPM3-216ENST00000473036 P3H4Q92791 437 aa13.2□□□□□ -0.3
TPM3-216ENST00000473036 FUBP1Q96AE4 644 aaKnown RBP13.2□□□□□ -0.3
TPM3-216ENST00000473036 RAB7BQ96AH8 199 aa13.2□□□□□ -0.3
TPM3-216ENST00000473036 AGAP3Q96P47 875 aa13.2□□□□□ -0.3
TPM3-216ENST00000473036 MYOCQ99972 504 aa13.2□□□□□ -0.3
TPM3-216ENST00000473036 GORASP1Q9BQQ3 440 aa13.2□□□□□ -0.3
TPM3-216ENST00000473036 WRAP53Q9BUR4 548 aaKnown RBP13.2□□□□□ -0.3
TPM3-216ENST00000473036 C1QTNF2Q9BXJ5 285 aa13.2□□□□□ -0.3
TPM3-216ENST00000473036 POLR1EQ9GZS1 481 aaKnown RBP13.2□□□□□ -0.3
TPM3-216ENST00000473036 BRD8Q9H0E9 1235 aa13.2□□□□□ -0.3
TPM3-216ENST00000473036 IL21RQ9HBE5 538 aa13.2□□□□□ -0.3
TPM3-216ENST00000473036 SEPT10Q9P0V9 454 aa13.2□□□□□ -0.3
TPM3-216ENST00000473036 COQ6Q9Y2Z9 468 aa13.2□□□□□ -0.3
TPM3-216ENST00000473036 JRKLQ9Y4A0 524 aa13.2□□□□□ -0.3
TPM3-216ENST00000473036 TTLL3Q9Y4R7 772 aa13.2□□□□□ -0.3
TPM3-216ENST00000473036 PCDHB9Q9Y5E1 797 aa13.2□□□□□ -0.3
TPM3-216ENST00000473036 RAI2Q9Y5P3 530 aa13.2□□□□□ -0.3
TPM3-216ENST00000473036 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.19□□□□□ -0.3
TPM3-216ENST00000473036 A8MX80 341 aa13.19□□□□□ -0.3
TPM3-216ENST00000473036 ESPNB1AK53 854 aa13.19□□□□□ -0.3
TPM3-216ENST00000473036 ARHGAP33O14559 1287 aa13.19□□□□□ -0.3
TPM3-216ENST00000473036 PPP1R12AO14974 1030 aaPredicted RBP13.19□□□□□ -0.3
TPM3-216ENST00000473036 TSPAN6O43657 245 aa13.19□□□□□ -0.3
TPM3-216ENST00000473036 SOCS5O75159 536 aa13.19□□□□□ -0.3
TPM3-216ENST00000473036 PGLSO95336 258 aa13.19□□□□□ -0.3
TPM3-216ENST00000473036 RBL1P28749 1068 aa13.19□□□□□ -0.3
TPM3-216ENST00000473036 CETN2P41208 172 aa13.19□□□□□ -0.3
TPM3-216ENST00000473036 CLDN2P57739 230 aa13.19□□□□□ -0.3
TPM3-216ENST00000473036 RACK1P63244 317 aaKnown RBP13.19□□□□□ -0.3
TPM3-216ENST00000473036 ITKQ08881 620 aa13.19□□□□□ -0.3
TPM3-216ENST00000473036 ZNF423Q2M1K9 1284 aa13.19□□□□□ -0.3
TPM3-216ENST00000473036 KIF19Q2TAC6 998 aa13.19□□□□□ -0.3
TPM3-216ENST00000473036 TEX44Q53QW1 395 aa13.19□□□□□ -0.3
TPM3-216ENST00000473036 SLC45A4Q5BKX6 768 aa13.19□□□□□ -0.3
TPM3-216ENST00000473036 TPRG1LQ5T0D9 272 aa13.19□□□□□ -0.3
TPM3-216ENST00000473036 BRAT1Q6PJG6 821 aa13.19□□□□□ -0.3
TPM3-216ENST00000473036 GCNT7Q6ZNI0 430 aa13.19□□□□□ -0.3
TPM3-216ENST00000473036 SPATS2Q86XZ4 545 aaKnown RBP13.19□□□□□ -0.3
TPM3-216ENST00000473036 ZNF567Q8N184 647 aa13.19□□□□□ -0.3
TPM3-216ENST00000473036 CBARPQ8N350 705 aaPredicted RBP13.19□□□□□ -0.3
TPM3-216ENST00000473036 DEFB124Q8NES8 71 aa13.19□□□□□ -0.3
TPM3-216ENST00000473036 SPATA22Q8NHS9 363 aa13.19□□□□□ -0.3
TPM3-216ENST00000473036 TFB1MQ8WVM0 346 aaKnown RBP13.19□□□□□ -0.3
TPM3-216ENST00000473036 IMP4Q96G21 291 aaKnown RBP13.19□□□□□ -0.3
TPM3-216ENST00000473036 SERAC1Q96JX3 654 aa13.19□□□□□ -0.3
TPM3-216ENST00000473036 BMFQ96LC9 184 aa13.19□□□□□ -0.3
TPM3-216ENST00000473036 TEKT5Q96M29 485 aa13.19□□□□□ -0.3
TPM3-216ENST00000473036 SLC17A9Q9BYT1 436 aa13.19□□□□□ -0.3
TPM3-216ENST00000473036 USP29Q9HBJ7 922 aa13.19□□□□□ -0.3
TPM3-216ENST00000473036 AMACRQ9UHK6 382 aa13.19□□□□□ -0.3
TPM3-216ENST00000473036 LHX6Q9UPM6 363 aa13.19□□□□□ -0.3
TPM3-216ENST00000473036 SNX11Q9Y5W9 270 aa13.19□□□□□ -0.3
TPM3-216ENST00000473036 POM121BA6NF01 834 aa13.18□□□□□ -0.3
TPM3-216ENST00000473036 F5H423 210 aaPredicted RBP13.18□□□□□ -0.3
TPM3-216ENST00000473036 MT-CYBP00156 380 aaPredicted RBP13.18□□□□□ -0.3
TPM3-216ENST00000473036 ALPIP09923 528 aa13.18□□□□□ -0.3
TPM3-216ENST00000473036 CTPS1P17812 591 aa13.18□□□□□ -0.3
TPM3-216ENST00000473036 SPINK2P20155 84 aa13.18□□□□□ -0.3
TPM3-216ENST00000473036 LHCGRP22888 699 aa13.18□□□□□ -0.3
TPM3-216ENST00000473036 CD86P42081 329 aa13.18□□□□□ -0.3
TPM3-216ENST00000473036 CTSKP43235 329 aa13.18□□□□□ -0.3
TPM3-216ENST00000473036 MAPK8P45983 427 aa13.18□□□□□ -0.3
TPM3-216ENST00000473036 AFF3P51826 1226 aaKnown RBP13.18□□□□□ -0.3
TPM3-216ENST00000473036 GNG11P61952 73 aa13.18□□□□□ -0.3
TPM3-216ENST00000473036 ETF1P62495 437 aaKnown RBP13.18□□□□□ -0.3
TPM3-216ENST00000473036 RPS21P63220 83 aaKnown RBP13.18□□□□□ -0.3
TPM3-216ENST00000473036 SLC14A1Q13336 389 aa13.18□□□□□ -0.3
TPM3-216ENST00000473036 XRCC4Q13426 336 aa13.18□□□□□ -0.3
TPM3-216ENST00000473036 SIX1Q15475 284 aaPredicted RBP13.18□□□□□ -0.3
TPM3-216ENST00000473036 UAP1L1Q3KQV9 507 aa13.18□□□□□ -0.3
TPM3-216ENST00000473036 RALGPS1Q5JS13 557 aa13.18□□□□□ -0.3
TPM3-216ENST00000473036 PRAMEF14Q5SWL7 426 aa13.18□□□□□ -0.3
TPM3-216ENST00000473036 NAPEPLDQ6IQ20 393 aa13.18□□□□□ -0.3
TPM3-216ENST00000473036 KIAA1161Q6NSJ0 714 aa13.18□□□□□ -0.3
TPM3-216ENST00000473036 NYAP1Q6ZVC0 841 aa13.18□□□□□ -0.3
TPM3-216ENST00000473036 TSPAN33Q86UF1 283 aa13.18□□□□□ -0.3
TPM3-216ENST00000473036 PELI3Q8N2H9 469 aa13.18□□□□□ -0.3
TPM3-216ENST00000473036 PIAS4Q8N2W9 510 aaPredicted RBP13.18□□□□□ -0.3
TPM3-216ENST00000473036 BBS5Q8N3I7 341 aa13.18□□□□□ -0.3
TPM3-216ENST00000473036 PDCD6IPQ8WUM4 868 aaKnown RBP13.18□□□□□ -0.3
TPM3-216ENST00000473036 HTR3CQ8WXA8 447 aa13.18□□□□□ -0.3
TPM3-216ENST00000473036 CENPTQ96BT3 561 aa13.18□□□□□ -0.3
TPM3-216ENST00000473036 FEM1CQ96JP0 617 aa13.18□□□□□ -0.3
TPM3-216ENST00000473036 TRIB3Q96RU7 358 aa13.18□□□□□ -0.3
TPM3-216ENST00000473036 RBM15Q96T37 977 aaKnown RBP eCLIP13.18□□□□□ -0.3
TPM3-216ENST00000473036 TDRD1Q9BXT4 1180 aaKnown RBP13.18□□□□□ -0.3
TPM3-216ENST00000473036 GLOD4Q9HC38 313 aa13.18□□□□□ -0.3
TPM3-216ENST00000473036 MBNL1Q9NR56 388 aaKnown RBP13.18□□□□□ -0.3
TPM3-216ENST00000473036 B4GALT6Q9UBX8 382 aa13.18□□□□□ -0.3
TPM3-216ENST00000473036 SUSD2Q9UGT4 822 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms