RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 KDELR3O43731 214 aa9.4□□□□□ -0.9
VCL-204ENST00000472585 TMCC1O94876 653 aa9.4□□□□□ -0.9
VCL-204ENST00000472585 LRIG2O94898 1065 aa9.4□□□□□ -0.9
VCL-204ENST00000472585 FUCA1P04066 466 aa9.4□□□□□ -0.9
VCL-204ENST00000472585 PRKCGP05129 697 aa9.4□□□□□ -0.9
VCL-204ENST00000472585 CCL4P13236 92 aa9.4□□□□□ -0.9
VCL-204ENST00000472585 CTSEP14091 401 aa9.4□□□□□ -0.9
VCL-204ENST00000472585 CYP11B1P15538 503 aa9.4□□□□□ -0.9
VCL-204ENST00000472585 GM2AP17900 193 aa9.4□□□□□ -0.9
VCL-204ENST00000472585 SCNN1AP37088 669 aa9.4□□□□□ -0.9
VCL-204ENST00000472585 SRP54P61011 504 aaKnown RBP9.4□□□□□ -0.9
VCL-204ENST00000472585 C16orf72Q14CZ0 275 aa9.4□□□□□ -0.9
VCL-204ENST00000472585 CYTH1Q15438 398 aa9.4□□□□□ -0.9
VCL-204ENST00000472585 CCDC14Q49A88 953 aa9.4□□□□□ -0.9
VCL-204ENST00000472585 SWT1Q5T5J6 900 aaKnown RBP9.4□□□□□ -0.9
VCL-204ENST00000472585 TAF3Q5VWG9 929 aa9.4□□□□□ -0.9
VCL-204ENST00000472585 LVRNQ6Q4G3 990 aa9.4□□□□□ -0.9
VCL-204ENST00000472585 ENPP7Q6UWV6 458 aa9.4□□□□□ -0.9
VCL-204ENST00000472585 GBP6Q6ZN66 633 aa9.4□□□□□ -0.9
VCL-204ENST00000472585 NOP9Q86U38 636 aaKnown RBP9.4□□□□□ -0.9
VCL-204ENST00000472585 ZSCAN30Q86W11 494 aa9.4□□□□□ -0.9
VCL-204ENST00000472585 PYROXD2Q8N2H3 581 aa9.4□□□□□ -0.9
VCL-204ENST00000472585 FSTL5Q8N475 847 aaPredicted RBP9.4□□□□□ -0.9
VCL-204ENST00000472585 IL22RA1Q8N6P7 574 aa9.4□□□□□ -0.9
VCL-204ENST00000472585 CCDC185Q8N715 623 aa9.4□□□□□ -0.9
VCL-204ENST00000472585 OR6C4Q8NGE1 309 aa9.4□□□□□ -0.9
VCL-204ENST00000472585 JOSD2Q8TAC2 188 aa9.4□□□□□ -0.9
VCL-204ENST00000472585 CPA5Q8WXQ8 436 aa9.4□□□□□ -0.9
VCL-204ENST00000472585 OR1E3Q8WZA6 343 aa9.4□□□□□ -0.9
VCL-204ENST00000472585 PDXPQ96GD0 296 aa9.4□□□□□ -0.9
VCL-204ENST00000472585 CATSPER2Q96P56 530 aa9.4□□□□□ -0.9
VCL-204ENST00000472585 RBM15Q96T37 977 aaKnown RBP eCLIP9.4□□□□□ -0.9
VCL-204ENST00000472585 TTYH3Q9C0H2 523 aa9.4□□□□□ -0.9
VCL-204ENST00000472585 TMEM248Q9NWD8 314 aa9.4□□□□□ -0.9
VCL-204ENST00000472585 APPL1Q9UKG1 709 aa9.4□□□□□ -0.9
VCL-204ENST00000472585 MFHAS1Q9Y4C4 1052 aa9.4□□□□□ -0.9
VCL-204ENST00000472585 ATP6V1DQ9Y5K8 247 aa9.4□□□□□ -0.9
VCL-204ENST00000472585 ST14Q9Y5Y6 855 aa9.4□□□□□ -0.9
VCL-204ENST00000472585 RNF215Q9Y6U7 377 aa9.4□□□□□ -0.9
VCL-204ENST00000472585 DOCK4Q8N1I0 1966 aa9.4□□□□□ -0.9
VCL-204ENST00000472585 CRYBG3Q68DQ2 2970 aa9.4□□□□□ -0.9
VCL-204ENST00000472585 GTPBP10A4D1E9 387 aaKnown RBP9.39□□□□□ -0.91
VCL-204ENST00000472585 PIGNO95427 931 aa9.39□□□□□ -0.91
VCL-204ENST00000472585 MMEP08473 750 aa9.39□□□□□ -0.91
VCL-204ENST00000472585 ALPIP09923 528 aa9.39□□□□□ -0.91
VCL-204ENST00000472585 RHOQP17081 205 aa9.39□□□□□ -0.91
VCL-204ENST00000472585 PPP1R2P41236 205 aa9.39□□□□□ -0.91
VCL-204ENST00000472585 PEX5P50542 639 aa9.39□□□□□ -0.91
VCL-204ENST00000472585 BLKP51451 505 aa9.39□□□□□ -0.91
VCL-204ENST00000472585 SNRPD1P62314 119 aaKnown RBP9.39□□□□□ -0.91
VCL-204ENST00000472585 NRG1Q02297 640 aaPredicted RBP9.39□□□□□ -0.91
VCL-204ENST00000472585 HLTFQ14527 1009 aaKnown RBP eCLIP9.39□□□□□ -0.91
VCL-204ENST00000472585 NFATC4Q14934 902 aa9.39□□□□□ -0.91
VCL-204ENST00000472585 LRRC14Q15048 493 aa9.39□□□□□ -0.91
VCL-204ENST00000472585 ELOCQ15369 112 aa9.39□□□□□ -0.91
VCL-204ENST00000472585 CERCAMQ5T4B2 595 aa9.39□□□□□ -0.91
VCL-204ENST00000472585 PHF19Q5T6S3 580 aa9.39□□□□□ -0.91
VCL-204ENST00000472585 FHL5Q5TD97 284 aa9.39□□□□□ -0.91
VCL-204ENST00000472585 RWDD4Q6NW29 188 aaKnown RBP9.39□□□□□ -0.91
VCL-204ENST00000472585 SPRED1Q7Z699 444 aa9.39□□□□□ -0.91
VCL-204ENST00000472585 CREBRFQ8IUR6 639 aa9.39□□□□□ -0.91
VCL-204ENST00000472585 CCNJLQ8IV13 435 aa9.39□□□□□ -0.91
VCL-204ENST00000472585 TMEM35BQ8NCS4 154 aa9.39□□□□□ -0.91
VCL-204ENST00000472585 GPT2Q8TD30 523 aa9.39□□□□□ -0.91
VCL-204ENST00000472585 GPBAR1Q8TDU6 330 aa9.39□□□□□ -0.91
VCL-204ENST00000472585 CXorf40AQ8TE69 158 aa9.39□□□□□ -0.91
VCL-204ENST00000472585 RXFP2Q8WXD0 754 aa9.39□□□□□ -0.91
VCL-204ENST00000472585 MIB2Q96AX9 1013 aa9.39□□□□□ -0.91
VCL-204ENST00000472585 LGR4Q9BXB1 951 aa9.39□□□□□ -0.91
VCL-204ENST00000472585 NAA15Q9BXJ9 866 aaKnown RBP9.39□□□□□ -0.91
VCL-204ENST00000472585 MAGEH1Q9H213 219 aa9.39□□□□□ -0.91
VCL-204ENST00000472585 RDH14Q9HBH5 336 aa9.39□□□□□ -0.91
VCL-204ENST00000472585 FGF22Q9HCT0 170 aa9.39□□□□□ -0.91
VCL-204ENST00000472585 SPATS2LQ9NUQ6 558 aaKnown RBP9.39□□□□□ -0.91
VCL-204ENST00000472585 DKK3Q9UBP4 350 aa9.39□□□□□ -0.91
VCL-204ENST00000472585 LHX3Q9UBR4 397 aa9.39□□□□□ -0.91
VCL-204ENST00000472585 FHOD1Q9Y613 1164 aa9.39□□□□□ -0.91
VCL-204ENST00000472585 CELSR2Q9HCU4 2923 aa9.39□□□□□ -0.91
VCL-204ENST00000472585 SPENQ96T58 3664 aaKnown RBP9.38□□□□□ -0.91
VCL-204ENST00000472585 CHD5Q8TDI0 1954 aa9.38□□□□□ -0.91
VCL-204ENST00000472585 TSPAN11A1L157 253 aa9.38□□□□□ -0.91
VCL-204ENST00000472585 RCCD1A6NED2 376 aa9.38□□□□□ -0.91
VCL-204ENST00000472585 GOLGA6L4A6NEF3 574 aa9.38□□□□□ -0.91
VCL-204ENST00000472585 ZNF891A8MT65 544 aaPredicted RBP9.38□□□□□ -0.91
VCL-204ENST00000472585 MTSS1O43312 755 aa9.38□□□□□ -0.91
VCL-204ENST00000472585 BUB1O43683 1085 aa9.38□□□□□ -0.91
VCL-204ENST00000472585 VPS4BO75351 444 aa9.38□□□□□ -0.91
VCL-204ENST00000472585 RASGRP1O95267 797 aa9.38□□□□□ -0.91
VCL-204ENST00000472585 PLEKP08567 350 aaPredicted RBP9.38□□□□□ -0.91
VCL-204ENST00000472585 CHRNB2P17787 502 aa9.38□□□□□ -0.91
VCL-204ENST00000472585 RGRP47804 291 aa9.38□□□□□ -0.91
VCL-204ENST00000472585 MAPKAPK2P49137 400 aa9.38□□□□□ -0.91
VCL-204ENST00000472585 LIG3P49916 1009 aa9.38□□□□□ -0.91
VCL-204ENST00000472585 HDAC4P56524 1084 aa9.38□□□□□ -0.91
VCL-204ENST00000472585 OR1D5P58170 312 aa9.38□□□□□ -0.91
VCL-204ENST00000472585 NOMO3P69849 1222 aa9.38□□□□□ -0.91
VCL-204ENST00000472585 KLRB1Q12918 225 aa9.38□□□□□ -0.91
VCL-204ENST00000472585 POLD3Q15054 466 aaPredicted RBP9.38□□□□□ -0.91
VCL-204ENST00000472585 AGERQ15109 404 aa9.38□□□□□ -0.91
VCL-204ENST00000472585 UGP2Q16851 508 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms