RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 KRT9P35527 623 aa19.11■□□□□ 0.65
SORT1-203ENST00000471996 SCNN1AP37088 669 aa19.11■□□□□ 0.65
SORT1-203ENST00000471996 LIG3P49916 1009 aa19.11■□□□□ 0.65
SORT1-203ENST00000471996 MLLT10P55197 1068 aa19.11■□□□□ 0.65
SORT1-203ENST00000471996 PTK2Q05397 1052 aa19.11■□□□□ 0.65
SORT1-203ENST00000471996 UGP2Q16851 508 aa19.11■□□□□ 0.65
SORT1-203ENST00000471996 DEFB109BQ30KR1 87 aa19.11■□□□□ 0.65
SORT1-203ENST00000471996 MANEALQ5VSG8 457 aa19.11■□□□□ 0.65
SORT1-203ENST00000471996 OR4D9Q8NGE8 314 aa19.11■□□□□ 0.65
SORT1-203ENST00000471996 SHC3Q92529 594 aa19.11■□□□□ 0.65
SORT1-203ENST00000471996 SMARCE1Q969G3 411 aa19.11■□□□□ 0.65
SORT1-203ENST00000471996 KIAA1143Q96AT1 154 aaPredicted RBP19.11■□□□□ 0.65
SORT1-203ENST00000471996 EFHD1Q9BUP0 239 aa19.11■□□□□ 0.65
SORT1-203ENST00000471996 PCDH12Q9NPG4 1184 aa19.11■□□□□ 0.65
SORT1-203ENST00000471996 SPATS2LQ9NUQ6 558 aaKnown RBP19.11■□□□□ 0.65
SORT1-203ENST00000471996 TMEM248Q9NWD8 314 aa19.11■□□□□ 0.65
SORT1-203ENST00000471996 DOCK4Q8N1I0 1966 aa19.1■□□□□ 0.65
SORT1-203ENST00000471996 B4E171 279 aa19.1■□□□□ 0.65
SORT1-203ENST00000471996 INSIG1O15503 277 aa19.1■□□□□ 0.65
SORT1-203ENST00000471996 BUB1O43683 1085 aa19.1■□□□□ 0.65
SORT1-203ENST00000471996 RAMP2O60895 175 aa19.1■□□□□ 0.65
SORT1-203ENST00000471996 GNA14O95837 355 aa19.1■□□□□ 0.65
SORT1-203ENST00000471996 HOXC4P09017 264 aaPredicted RBP19.1■□□□□ 0.65
SORT1-203ENST00000471996 OAS2P29728 719 aaKnown RBP19.1■□□□□ 0.65
SORT1-203ENST00000471996 FLT3P36888 993 aa19.1■□□□□ 0.65
SORT1-203ENST00000471996 TSPAN7P41732 249 aa19.1■□□□□ 0.65
SORT1-203ENST00000471996 GPR3P46089 330 aa19.1■□□□□ 0.65
SORT1-203ENST00000471996 MARSP56192 900 aaKnown RBP19.1■□□□□ 0.65
SORT1-203ENST00000471996 NRG1Q02297 640 aaPredicted RBP19.1■□□□□ 0.65
SORT1-203ENST00000471996 SEPT6Q14141 434 aa19.1■□□□□ 0.65
SORT1-203ENST00000471996 DCAF12Q5T6F0 453 aa19.1■□□□□ 0.65
SORT1-203ENST00000471996 FAM102AQ5T9C2 384 aaPredicted RBP19.1■□□□□ 0.65
SORT1-203ENST00000471996 FHL5Q5TD97 284 aa19.1■□□□□ 0.65
SORT1-203ENST00000471996 TRIM65Q6PJ69 517 aa19.1■□□□□ 0.65
SORT1-203ENST00000471996 NLGN4XQ8N0W4 816 aa19.1■□□□□ 0.65
SORT1-203ENST00000471996 NLGN4YQ8NFZ3 816 aaPredicted RBP19.1■□□□□ 0.65
SORT1-203ENST00000471996 CASKIN2Q8WXE0 1202 aa19.1■□□□□ 0.65
SORT1-203ENST00000471996 SPRY4Q9C004 299 aa19.1■□□□□ 0.65
SORT1-203ENST00000471996 SCAND2PQ9GZW5 306 aaPredicted RBP19.1■□□□□ 0.65
SORT1-203ENST00000471996 CYP4F12Q9HCS2 524 aa19.1■□□□□ 0.65
SORT1-203ENST00000471996 PLCB1Q9NQ66 1216 aa19.1■□□□□ 0.65
SORT1-203ENST00000471996 OCIAD1Q9NX40 245 aa19.1■□□□□ 0.65
SORT1-203ENST00000471996 OR12D3Q9UGF7 316 aa19.1■□□□□ 0.65
SORT1-203ENST00000471996 TP53TG5Q9Y2B4 290 aa19.1■□□□□ 0.65
SORT1-203ENST00000471996 TEP1Q99973 2627 aaKnown RBP19.09■□□□□ 0.65
SORT1-203ENST00000471996 LOC101059948A0A1B0GTJ6 334 aa19.09■□□□□ 0.65
SORT1-203ENST00000471996 TSPAN11A1L157 253 aa19.09■□□□□ 0.65
SORT1-203ENST00000471996 FGF1P05230 155 aa19.09■□□□□ 0.65
SORT1-203ENST00000471996 THRAP10827 490 aa19.09■□□□□ 0.65
SORT1-203ENST00000471996 MAP4P27816 1152 aaKnown RBP19.09■□□□□ 0.65
SORT1-203ENST00000471996 GABRB2P47870 512 aa19.09■□□□□ 0.65
SORT1-203ENST00000471996 RAB15P59190 212 aa19.09■□□□□ 0.65
SORT1-203ENST00000471996 RHOAP61586 193 aa19.09■□□□□ 0.65
SORT1-203ENST00000471996 SQSTM1Q13501 440 aa19.09■□□□□ 0.65
SORT1-203ENST00000471996 INO80DQ53TQ3 878 aaPredicted RBP19.09■□□□□ 0.65
SORT1-203ENST00000471996 ANKS6Q68DC2 871 aa19.09■□□□□ 0.65
SORT1-203ENST00000471996 TRNP1Q6NT89 227 aa19.09■□□□□ 0.65
SORT1-203ENST00000471996 RWDD4Q6NW29 188 aaKnown RBP19.09■□□□□ 0.65
SORT1-203ENST00000471996 ERAP2Q6P179 960 aa19.09■□□□□ 0.65
SORT1-203ENST00000471996 FMR1NBQ8N0W7 255 aaPredicted RBP19.09■□□□□ 0.65
SORT1-203ENST00000471996 TEX19Q8NA77 164 aa19.09■□□□□ 0.65
SORT1-203ENST00000471996 NETO2Q8NC67 525 aa19.09■□□□□ 0.65
SORT1-203ENST00000471996 ZDHHC1Q8WTX9 485 aa19.09■□□□□ 0.65
SORT1-203ENST00000471996 CFAP57Q96MR6 1250 aa19.09■□□□□ 0.65
SORT1-203ENST00000471996 CRACR2AQ9BSW2 395 aa19.09■□□□□ 0.65
SORT1-203ENST00000471996 PIGNO95427 931 aa19.08■□□□□ 0.64
SORT1-203ENST00000471996 CCNB1P14635 433 aa19.08■□□□□ 0.64
SORT1-203ENST00000471996 TRIM23P36406 574 aa19.08■□□□□ 0.64
SORT1-203ENST00000471996 MMP12P39900 470 aa19.08■□□□□ 0.64
SORT1-203ENST00000471996 PPP1R2P41236 205 aa19.08■□□□□ 0.64
SORT1-203ENST00000471996 STAT1P42224 750 aa19.08■□□□□ 0.64
SORT1-203ENST00000471996 UQCRFS1P47985 274 aa19.08■□□□□ 0.64
SORT1-203ENST00000471996 MC1RQ01726 317 aa19.08■□□□□ 0.64
SORT1-203ENST00000471996 TSR1Q2NL82 804 aaKnown RBP19.08■□□□□ 0.64
SORT1-203ENST00000471996 NKAIN2Q5VXU1 208 aa19.08■□□□□ 0.64
SORT1-203ENST00000471996 KLHL10Q6JEL2 608 aa19.08■□□□□ 0.64
SORT1-203ENST00000471996 XYLT1Q86Y38 959 aa19.08■□□□□ 0.64
SORT1-203ENST00000471996 C18orf8Q96DM3 657 aa19.08■□□□□ 0.64
SORT1-203ENST00000471996 TEFMQ96QE5 360 aaKnown RBP19.08■□□□□ 0.64
SORT1-203ENST00000471996 SUV39H2Q9H5I1 410 aa19.08■□□□□ 0.64
SORT1-203ENST00000471996 APEX2Q9UBZ4 518 aa19.08■□□□□ 0.64
SORT1-203ENST00000471996 MOSPD1Q9UJG1 213 aa19.08■□□□□ 0.64
SORT1-203ENST00000471996 CHD5Q8TDI0 1954 aa19.08■□□□□ 0.64
SORT1-203ENST00000471996 CFAP69A5D8W1 941 aa19.07■□□□□ 0.64
SORT1-203ENST00000471996 EFCAB7A8K855 629 aa19.07■□□□□ 0.64
SORT1-203ENST00000471996 VPS4BO75351 444 aa19.07■□□□□ 0.64
SORT1-203ENST00000471996 ECEL1O95672 775 aa19.07■□□□□ 0.64
SORT1-203ENST00000471996 SLC9A1P19634 815 aa19.07■□□□□ 0.64
SORT1-203ENST00000471996 MPSTP25325 297 aa19.07■□□□□ 0.64
SORT1-203ENST00000471996 APBA1Q02410 837 aa19.07■□□□□ 0.64
SORT1-203ENST00000471996 CRTC2Q53ET0 693 aaPredicted RBP19.07■□□□□ 0.64
SORT1-203ENST00000471996 SMYD5Q6GMV2 418 aa19.07■□□□□ 0.64
SORT1-203ENST00000471996 ISM2Q6H9L7 571 aa19.07■□□□□ 0.64
SORT1-203ENST00000471996 CAPRIN2Q6IMN6 1127 aaKnown RBP19.07■□□□□ 0.64
SORT1-203ENST00000471996 SLC47A2Q86VL8 602 aa19.07■□□□□ 0.64
SORT1-203ENST00000471996 FAM129CQ86XR2 697 aa19.07■□□□□ 0.64
SORT1-203ENST00000471996 NRROSQ86YC3 692 aa19.07■□□□□ 0.64
SORT1-203ENST00000471996 NRSN1Q8IZ57 195 aa19.07■□□□□ 0.64
SORT1-203ENST00000471996 UNC5BQ8IZJ1 945 aa19.07■□□□□ 0.64
SORT1-203ENST00000471996 BMPERQ8N8U9 685 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms