RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 ARL10Q8N8L6 244 aa13.29□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 FNDC11Q9BVV2 318 aa13.29□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 U3KQV3 271 aa13.29□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 CPSF1Q10570 1443 aaKnown RBP13.29□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 SPATA31E1Q6ZUB1 1445 aa13.29□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 ATP6AP2A0A1C7CYW4 349 aa13.29□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 ATP6AP2O75787 350 aa13.29□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 LSM8O95777 96 aaKnown RBP13.29□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 UGT1A5P35504 534 aa13.29□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 TMPRSS11BQ86T26 416 aa13.29□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 PDE2AO00408 941 aaPredicted RBP13.29□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 KCNA5P22460 613 aa13.29□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 PSMD8P48556 350 aa13.29□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 DRG2P55039 364 aaKnown RBP13.29□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 DUSP4Q13115 394 aa13.29□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 MED22Q15528 200 aa13.29□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 C1orf189Q5VU69 101 aa13.29□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 PRMT9Q6P2P2 845 aa13.29□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 SDR16C5Q8N3Y7 309 aa13.29□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 FSTL5Q8N475 847 aaPredicted RBP13.29□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 TERB1Q8NA31 727 aa13.29□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 VANGL1Q8TAA9 524 aaPredicted RBP13.29□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 OSBPL2Q9H1P3 480 aa13.29□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 THAP1Q9NVV9 213 aa13.29□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 SIRPGQ9P1W8 387 aa13.29□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 PDP2Q9P2J9 529 aa13.29□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 NTSR2O95665 410 aa13.29□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 PLGP00747 810 aaPredicted RBP13.29□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 ZSCAN5DPP0CG00 497 aa13.29□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 CCNA2P20248 432 aa13.29□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 ACAP1Q15027 740 aa13.29□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 AMZ1Q400G9 498 aa13.29□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 C9orf64Q5T6V5 341 aa13.29□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 ABRAQ8N0Z2 381 aa13.29□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 DHRSXQ8N5I4 330 aa13.29□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 OR2L3Q8NG85 312 aa13.29□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 CDH7Q9ULB5 785 aa13.29□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 GIT1Q9Y2X7 761 aa13.29□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 RFX7Q2KHR2 1363 aa13.29□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 SEC16AO15027 2179 aa13.29□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 RSL1D1O76021 490 aaKnown RBP13.28□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 PIGNO95427 931 aa13.28□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 ZBTB11O95625 1053 aaPredicted RBP13.28□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 RB1P06400 928 aa13.28□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 NT5EP21589 574 aa13.28□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 SLC26A3P40879 764 aa13.28□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 MYBPC3Q14896 1274 aa13.28□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 UBXN2BQ14CS0 331 aa13.28□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 KCTD8Q6ZWB6 473 aa13.28□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 CDYL2Q8N8U2 506 aa13.28□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 RP9Q8TA86 221 aaKnown RBP13.28□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 SEMA3CQ99985 751 aa13.28□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 NECTIN3Q9NQS3 549 aa13.28□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 TRIP11Q15643 1979 aa13.28□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 G3V2T6 193 aa13.28□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 HCN1O60741 890 aa13.28□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 DBTP11182 482 aaKnown RBP13.28□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 CCNB1P14635 433 aa13.28□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 PGAM1P18669 254 aa13.28□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 CHKAP35790 457 aa13.28□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 TRIM40Q6P9F5 258 aa13.28□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 SETD9Q8NE22 299 aa13.28□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 ZFP28Q8NHY6 868 aa13.28□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 GAL3ST4Q96RP7 486 aa13.28□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 WNT10BO00744 389 aa13.28□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 SLC26A4O43511 780 aa13.28□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 CD44P16070 742 aaKnown RBP13.28□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 SLC6A2P23975 617 aa13.28□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 SCNN1AP37088 669 aa13.28□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 KCTD19Q17RG1 926 aaPredicted RBP13.28□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 BHLHB9Q6PI77 547 aa13.28□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 OR4A15Q8NGL6 344 aa13.28□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 ZNF285Q96NJ3 590 aa13.28□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 PANX1Q96RD7 426 aa13.28□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 TMX2Q9Y320 296 aa13.28□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 CD52P31358 61 aa13.28□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 STAT5AP42229 794 aa13.28□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 CDKL1Q00532 357 aa13.28□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 INTS11Q5TA45 600 aaKnown RBP13.28□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 AARSD1Q9BTE6 412 aaKnown RBP13.28□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 SEMA6BQ9H3T3 888 aa13.28□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 ABCB10Q9NRK6 738 aa13.28□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 PTPRJQ12913 1337 aa13.28□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 LINC00032P0C843 101 aa13.28□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 MYL9P24844 172 aa13.28□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 HNRNPH1P31943 449 aaKnown RBP13.28□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 CTSOP43234 321 aaPredicted RBP13.28□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 NRG1Q02297 640 aaPredicted RBP13.28□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 PRKG2Q13237 762 aa13.28□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 STXBP5Q5T5C0 1151 aa13.28□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 P4HA3Q7Z4N8 544 aa13.28□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 DNASE1L2Q92874 299 aa13.28□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 UBE2QL1A1L167 161 aa13.28□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 XKRYO14609 159 aa13.28□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 MSR1P21757 451 aa13.28□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 DGUOKQ16854 277 aa13.28□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 CHST4Q8NCG5 386 aa13.28□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 ADCY4Q8NFM4 1077 aa13.28□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 TEX47Q8TBZ9 253 aa13.28□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 OR8D1Q8WZ84 308 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms