RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 C4orf47A7E2U8 309 aa15.36■□□□□ 0.05
SDC3-203ENST00000471567 OPHN1O60890 802 aa15.36■□□□□ 0.05
SDC3-203ENST00000471567 PRKCGP05129 697 aa15.36■□□□□ 0.05
SDC3-203ENST00000471567 PDHA1P08559 390 aa15.36■□□□□ 0.05
SDC3-203ENST00000471567 RBP3P10745 1247 aa15.36■□□□□ 0.05
SDC3-203ENST00000471567 RBL1P28749 1068 aa15.36■□□□□ 0.05
SDC3-203ENST00000471567 VIPR1P32241 457 aa15.36■□□□□ 0.05
SDC3-203ENST00000471567 CD86P42081 329 aa15.36■□□□□ 0.05
SDC3-203ENST00000471567 LIG3P49916 1009 aa15.36■□□□□ 0.05
SDC3-203ENST00000471567 CCDC173Q0VFZ6 552 aa15.36■□□□□ 0.05
SDC3-203ENST00000471567 RALGDSQ12967 914 aa15.36■□□□□ 0.05
SDC3-203ENST00000471567 HLA-BQ31612 363 aa15.36■□□□□ 0.05
SDC3-203ENST00000471567 LIPIQ6XZB0 460 aa15.36■□□□□ 0.05
SDC3-203ENST00000471567 USP45Q70EL2 814 aa15.36■□□□□ 0.05
SDC3-203ENST00000471567 ABI3BPQ7Z7G0 1075 aa15.36■□□□□ 0.05
SDC3-203ENST00000471567 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.36■□□□□ 0.05
SDC3-203ENST00000471567 TADA1Q96BN2 335 aa15.36■□□□□ 0.05
SDC3-203ENST00000471567 CENPTQ96BT3 561 aa15.36■□□□□ 0.05
SDC3-203ENST00000471567 KLHDC7BQ96G42 594 aa15.36■□□□□ 0.05
SDC3-203ENST00000471567 RTKNQ9BST9 563 aa15.36■□□□□ 0.05
SDC3-203ENST00000471567 TLR10Q9BXR5 811 aa15.36■□□□□ 0.05
SDC3-203ENST00000471567 PCDH9Q9HC56 1237 aa15.36■□□□□ 0.05
SDC3-203ENST00000471567 DLL3Q9NYJ7 618 aa15.36■□□□□ 0.05
SDC3-203ENST00000471567 KLHL8Q9P2G9 620 aaPredicted RBP15.36■□□□□ 0.05
SDC3-203ENST00000471567 B4GALT6Q9UBX8 382 aa15.36■□□□□ 0.05
SDC3-203ENST00000471567 CHKBQ9Y259 395 aa15.36■□□□□ 0.05
SDC3-203ENST00000471567 SNX11Q9Y5W9 270 aa15.36■□□□□ 0.05
SDC3-203ENST00000471567 CEP250Q9BV73 2442 aa15.36■□□□□ 0.05
SDC3-203ENST00000471567 DOCK9Q9BZ29 2069 aa15.36■□□□□ 0.05
SDC3-203ENST00000471567 A6NNZ2 444 aa15.35■□□□□ 0.05
SDC3-203ENST00000471567 KCNK3O14649 394 aa15.35■□□□□ 0.05
SDC3-203ENST00000471567 TOR1BO14657 336 aa15.35■□□□□ 0.05
SDC3-203ENST00000471567 FPGTO14772 594 aa15.35■□□□□ 0.05
SDC3-203ENST00000471567 PRLP01236 227 aa15.35■□□□□ 0.05
SDC3-203ENST00000471567 ELFN1P0C7U0 828 aa15.35■□□□□ 0.05
SDC3-203ENST00000471567 ZNF883P0CG24 379 aa15.35■□□□□ 0.05
SDC3-203ENST00000471567 C6P13671 934 aa15.35■□□□□ 0.05
SDC3-203ENST00000471567 CD68P34810 354 aaPredicted RBP15.35■□□□□ 0.05
SDC3-203ENST00000471567 EPHB1P54762 984 aa15.35■□□□□ 0.05
SDC3-203ENST00000471567 NXPH1P58417 271 aa15.35■□□□□ 0.05
SDC3-203ENST00000471567 SLC14A1Q13336 389 aa15.35■□□□□ 0.05
SDC3-203ENST00000471567 PUM1Q14671 1186 aaKnown RBP eCLIP15.35■□□□□ 0.05
SDC3-203ENST00000471567 ZNF423Q2M1K9 1284 aa15.35■□□□□ 0.05
SDC3-203ENST00000471567 DARS2Q6PI48 645 aaKnown RBP15.35■□□□□ 0.05
SDC3-203ENST00000471567 LAYNQ6UX15 382 aa15.35■□□□□ 0.05
SDC3-203ENST00000471567 KYAT3Q6YP21 454 aaKnown RBP15.35■□□□□ 0.05
SDC3-203ENST00000471567 GCNT7Q6ZNI0 430 aa15.35■□□□□ 0.05
SDC3-203ENST00000471567 PID1Q7Z2X4 250 aa15.35■□□□□ 0.05
SDC3-203ENST00000471567 SLC13A5Q86YT5 568 aaPredicted RBP15.35■□□□□ 0.05
SDC3-203ENST00000471567 DCP2Q8IU60 420 aaKnown RBP15.35■□□□□ 0.05
SDC3-203ENST00000471567 ZNF567Q8N184 647 aa15.35■□□□□ 0.05
SDC3-203ENST00000471567 BMFQ96LC9 184 aa15.35■□□□□ 0.05
SDC3-203ENST00000471567 FCRL5Q96RD9 977 aa15.35■□□□□ 0.05
SDC3-203ENST00000471567 RBM15Q96T37 977 aaKnown RBP eCLIP15.35■□□□□ 0.053e-9■■■■■ 30.8
SDC3-203ENST00000471567 MYOCQ99972 504 aa15.35■□□□□ 0.05
SDC3-203ENST00000471567 ADGRE3Q9BY15 652 aa15.35■□□□□ 0.05
SDC3-203ENST00000471567 FRMD8P1Q9BZ68 369 aaPredicted RBP15.35■□□□□ 0.05
SDC3-203ENST00000471567 GAREM1Q9H706 876 aa15.35■□□□□ 0.05
SDC3-203ENST00000471567 ERVMER34-1Q9H9K5 563 aa15.35■□□□□ 0.05
SDC3-203ENST00000471567 FZD3Q9NPG1 666 aa15.35■□□□□ 0.05
SDC3-203ENST00000471567 GDF3Q9NR23 364 aa15.35■□□□□ 0.05
SDC3-203ENST00000471567 KCTD5Q9NXV2 234 aa15.35■□□□□ 0.05
SDC3-203ENST00000471567 DNPEPQ9ULA0 475 aa15.35■□□□□ 0.05
SDC3-203ENST00000471567 CA5BQ9Y2D0 317 aa15.35■□□□□ 0.05
SDC3-203ENST00000471567 JRKLQ9Y4A0 524 aa15.35■□□□□ 0.05
SDC3-203ENST00000471567 KNL1Q8NG31 2342 aa15.35■□□□□ 0.05
SDC3-203ENST00000471567 A0A0J9YYE9 177 aa15.34■□□□□ 0.05
SDC3-203ENST00000471567 PSMD11O00231 422 aa15.34■□□□□ 0.05
SDC3-203ENST00000471567 TM4SF5O14894 197 aa15.34■□□□□ 0.05
SDC3-203ENST00000471567 RAD51BO15315 384 aa15.34■□□□□ 0.05
SDC3-203ENST00000471567 LZTS3O60299 673 aaPredicted RBP15.34■□□□□ 0.05
SDC3-203ENST00000471567 STK10O94804 968 aaKnown RBP15.34■□□□□ 0.05
SDC3-203ENST00000471567 HEXIM1O94992 359 aaKnown RBP15.34■□□□□ 0.05
SDC3-203ENST00000471567 TRBC1P01850 177 aa15.34■□□□□ 0.05
SDC3-203ENST00000471567 THEGLP0DJG4 465 aa15.34■□□□□ 0.05
SDC3-203ENST00000471567 MSNP26038 577 aaKnown RBP15.34■□□□□ 0.05
SDC3-203ENST00000471567 SEMG2Q02383 582 aa15.34■□□□□ 0.05
SDC3-203ENST00000471567 CBARPQ8N350 705 aaPredicted RBP15.34■□□□□ 0.05
SDC3-203ENST00000471567 OXR1Q8N573 874 aa15.34■□□□□ 0.05
SDC3-203ENST00000471567 TP53I13Q8NBR0 393 aaPredicted RBP15.34■□□□□ 0.05
SDC3-203ENST00000471567 SLC35B2Q8TB61 432 aa15.34■□□□□ 0.05
SDC3-203ENST00000471567 RMDN1Q96DB5 314 aa15.34■□□□□ 0.05
SDC3-203ENST00000471567 FAM153AQ9UHL3 310 aa15.34■□□□□ 0.05
SDC3-203ENST00000471567 ADAMTS9Q9P2N4 1935 aa15.33■□□□□ 0.05
SDC3-203ENST00000471567 TCRBV7S2A1N4TA0A589 114 aa15.33■□□□□ 0.04
SDC3-203ENST00000471567 NPIPB15A6NHN6 443 aaPredicted RBP15.33■□□□□ 0.04
SDC3-203ENST00000471567 H0Y8X5 98 aa15.33■□□□□ 0.04
SDC3-203ENST00000471567 YKT6O15498 198 aa15.33■□□□□ 0.04
SDC3-203ENST00000471567 KCNN4O15554 427 aa15.33■□□□□ 0.04
SDC3-203ENST00000471567 RECQL5O94762 991 aaPredicted RBP15.33■□□□□ 0.04
SDC3-203ENST00000471567 ZNF30P17039 623 aa15.33■□□□□ 0.04
SDC3-203ENST00000471567 NFKB1P19838 968 aa15.33■□□□□ 0.04
SDC3-203ENST00000471567 HNF1BP35680 557 aa15.33■□□□□ 0.04
SDC3-203ENST00000471567 RABIFP47224 123 aa15.33■□□□□ 0.04
SDC3-203ENST00000471567 ID4P47928 161 aa15.33■□□□□ 0.04
SDC3-203ENST00000471567 CLDN2P57739 230 aa15.33■□□□□ 0.04
SDC3-203ENST00000471567 PFN3P60673 137 aa15.33■□□□□ 0.04
SDC3-203ENST00000471567 CDK18Q07002 472 aa15.33■□□□□ 0.04
SDC3-203ENST00000471567 ARHGEF7Q14155 803 aa15.33■□□□□ 0.04
SDC3-203ENST00000471567 LRRC14Q15048 493 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms