RNA–Protein interactions for RNA: ENST00000470247.1

SREBF1-209, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-209ENST00000470247 ADH1BP00325 375 aa11.3□□□□□ -0.6
SREBF1-209ENST00000470247 CPP00450 1065 aa11.3□□□□□ -0.6
SREBF1-209ENST00000470247 ADRB3P13945 408 aa11.3□□□□□ -0.6
SREBF1-209ENST00000470247 CA4P22748 312 aa11.3□□□□□ -0.6
SREBF1-209ENST00000470247 PSMA3P25788 255 aa11.3□□□□□ -0.6
SREBF1-209ENST00000470247 P2RY2P41231 377 aa11.3□□□□□ -0.6
SREBF1-209ENST00000470247 GRIA4P48058 902 aa11.3□□□□□ -0.6
SREBF1-209ENST00000470247 CLCN5P51795 746 aa11.3□□□□□ -0.6
SREBF1-209ENST00000470247 ARL4CP56559 192 aa11.3□□□□□ -0.6
SREBF1-209ENST00000470247 SEMG2Q02383 582 aa11.3□□□□□ -0.6
SREBF1-209ENST00000470247 ZBTB16Q05516 673 aa11.3□□□□□ -0.6
SREBF1-209ENST00000470247 RALGDSQ12967 914 aa11.3□□□□□ -0.6
SREBF1-209ENST00000470247 HIF1AQ16665 826 aa11.3□□□□□ -0.6
SREBF1-209ENST00000470247 BBS9Q3SYG4 887 aa11.3□□□□□ -0.6
SREBF1-209ENST00000470247 AGBL4Q5VU57 503 aa11.3□□□□□ -0.6
SREBF1-209ENST00000470247 CRTC1Q6UUV9 634 aa11.3□□□□□ -0.6
SREBF1-209ENST00000470247 ERN2Q76MJ5 926 aaKnown RBP11.3□□□□□ -0.6
SREBF1-209ENST00000470247 TTC7BQ86TV6 843 aa11.3□□□□□ -0.6
SREBF1-209ENST00000470247 TSPAN33Q86UF1 283 aa11.3□□□□□ -0.6
SREBF1-209ENST00000470247 RASSF3Q86WH2 238 aa11.3□□□□□ -0.6
SREBF1-209ENST00000470247 CACUL1Q86Y37 369 aa11.3□□□□□ -0.6
SREBF1-209ENST00000470247 RELL1Q8IUW5 271 aa11.3□□□□□ -0.6
SREBF1-209ENST00000470247 PDIK1LQ8N165 341 aa11.3□□□□□ -0.6
SREBF1-209ENST00000470247 HDDC3Q8N4P3 179 aa11.3□□□□□ -0.6
SREBF1-209ENST00000470247 BRSK1Q8TDC3 778 aa11.3□□□□□ -0.6
SREBF1-209ENST00000470247 AENQ8WTP8 325 aaKnown RBP11.3□□□□□ -0.6
SREBF1-209ENST00000470247 SIPA1Q96FS4 1042 aa11.3□□□□□ -0.6
SREBF1-209ENST00000470247 HHIPQ96QV1 700 aa11.3□□□□□ -0.6
SREBF1-209ENST00000470247 FMO2Q99518 471 aa11.3□□□□□ -0.6
SREBF1-209ENST00000470247 TRIM56Q9BRZ2 755 aaKnown RBP11.3□□□□□ -0.6
SREBF1-209ENST00000470247 PHACTR1Q9C0D0 580 aa11.3□□□□□ -0.6
SREBF1-209ENST00000470247 MFSD1Q9H3U5 465 aa11.3□□□□□ -0.6
SREBF1-209ENST00000470247 MAGEE1Q9HCI5 957 aa11.3□□□□□ -0.6
SREBF1-209ENST00000470247 PCDH12Q9NPG4 1184 aa11.3□□□□□ -0.6
SREBF1-209ENST00000470247 SYBUQ9NX95 663 aa11.3□□□□□ -0.6
SREBF1-209ENST00000470247 BFARQ9NZS9 450 aa11.3□□□□□ -0.6
SREBF1-209ENST00000470247 B4GALT6Q9UBX8 382 aa11.3□□□□□ -0.6
SREBF1-209ENST00000470247 GGT7Q9UJ14 662 aa11.3□□□□□ -0.6
SREBF1-209ENST00000470247 KCTD3Q9Y597 815 aa11.3□□□□□ -0.6
SREBF1-209ENST00000470247 NUMA1Q14980 2115 aa11.3□□□□□ -0.6
SREBF1-209ENST00000470247 BDP1A6H8Y1 2624 aa11.3□□□□□ -0.6
SREBF1-209ENST00000470247 A0A1W2PP55 124 aa11.29□□□□□ -0.6
SREBF1-209ENST00000470247 MROH6A6NGR9 719 aa11.29□□□□□ -0.6
SREBF1-209ENST00000470247 CAPN8A6NHC0 703 aa11.29□□□□□ -0.6
SREBF1-209ENST00000470247 AP3B1O00203 1094 aa11.29□□□□□ -0.6
SREBF1-209ENST00000470247 EIF3HO15372 352 aaKnown RBP eCLIP11.29□□□□□ -0.6
SREBF1-209ENST00000470247 RNASEH1O60930 286 aaKnown RBP11.29□□□□□ -0.6
SREBF1-209ENST00000470247 PAPSS2O95340 614 aaPredicted RBP11.29□□□□□ -0.6
SREBF1-209ENST00000470247 TUBBP07437 444 aa11.29□□□□□ -0.6
SREBF1-209ENST00000470247 GM2AP17900 193 aa11.29□□□□□ -0.6
SREBF1-209ENST00000470247 LHCGRP22888 699 aa11.29□□□□□ -0.6
SREBF1-209ENST00000470247 ELK3P41970 407 aa11.29□□□□□ -0.6
SREBF1-209ENST00000470247 MAGEA9P43362 315 aa11.29□□□□□ -0.6
SREBF1-209ENST00000470247 NEK3P51956 506 aa11.29□□□□□ -0.6
SREBF1-209ENST00000470247 EPHB1P54762 984 aa11.29□□□□□ -0.6
SREBF1-209ENST00000470247 POLR2LP62875 67 aaKnown RBP11.29□□□□□ -0.6
SREBF1-209ENST00000470247 PTSQ03393 145 aa11.29□□□□□ -0.6
SREBF1-209ENST00000470247 PDIA2Q13087 525 aaKnown RBP11.29□□□□□ -0.6
SREBF1-209ENST00000470247 PTPRCAPQ14761 206 aa11.29□□□□□ -0.6
SREBF1-209ENST00000470247 CCDC38Q502W7 563 aa11.29□□□□□ -0.6
SREBF1-209ENST00000470247 HP1BP3Q5SSJ5 553 aaPredicted RBP11.29□□□□□ -0.6
SREBF1-209ENST00000470247 UBAP2Q5T6F2 1119 aaKnown RBP11.29□□□□□ -0.6
SREBF1-209ENST00000470247 DENND2CQ68D51 928 aa11.29□□□□□ -0.6
SREBF1-209ENST00000470247 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.29□□□□□ -0.6
SREBF1-209ENST00000470247 TMC3Q7Z5M5 1100 aa11.29□□□□□ -0.6
SREBF1-209ENST00000470247 BMP8AQ7Z5Y6 402 aa11.29□□□□□ -0.6
SREBF1-209ENST00000470247 TMEM105Q8N8V8 129 aa11.29□□□□□ -0.6
SREBF1-209ENST00000470247 DNAAF3Q8N9W5 541 aa11.29□□□□□ -0.6
SREBF1-209ENST00000470247 HMGB4Q8WW32 186 aa11.29□□□□□ -0.6
SREBF1-209ENST00000470247 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.29□□□□□ -0.6
SREBF1-209ENST00000470247 ZNF778Q96MU6 729 aa11.29□□□□□ -0.6
SREBF1-209ENST00000470247 FCRL3Q96P31 734 aaPredicted RBP11.29□□□□□ -0.6
SREBF1-209ENST00000470247 RANBP9Q96S59 729 aa11.29□□□□□ -0.6
SREBF1-209ENST00000470247 IER2Q9BTL4 223 aa11.29□□□□□ -0.6
SREBF1-209ENST00000470247 KIFC1Q9BW19 673 aa11.29□□□□□ -0.6
SREBF1-209ENST00000470247 IL22Q9GZX6 179 aa11.29□□□□□ -0.6
SREBF1-209ENST00000470247 POLMQ9NP87 494 aaPredicted RBP11.29□□□□□ -0.6
SREBF1-209ENST00000470247 ITM2CQ9NQX7 267 aa11.29□□□□□ -0.6
SREBF1-209ENST00000470247 FBXL12Q9NXK8 326 aa11.29□□□□□ -0.6
SREBF1-209ENST00000470247 USP36Q9P275 1121 aaKnown RBP11.29□□□□□ -0.6
SREBF1-209ENST00000470247 SCML1Q9UN30 329 aa11.29□□□□□ -0.6
SREBF1-209ENST00000470247 ITM2BQ9Y287 266 aa11.29□□□□□ -0.6
SREBF1-209ENST00000470247 FADS3Q9Y5Q0 445 aa11.29□□□□□ -0.6
SREBF1-209ENST00000470247 ARL5AQ9Y689 179 aa11.29□□□□□ -0.6
SREBF1-209ENST00000470247 A8MX80 341 aa11.28□□□□□ -0.6
SREBF1-209ENST00000470247 AP1G1O43747 822 aa11.28□□□□□ -0.6
SREBF1-209ENST00000470247 CLDN7O95471 211 aa11.28□□□□□ -0.6
SREBF1-209ENST00000470247 IGLV3-19P01714 112 aa11.28□□□□□ -0.6
SREBF1-209ENST00000470247 TDGF1P13385 188 aa11.28□□□□□ -0.6
SREBF1-209ENST00000470247 ADRA1DP25100 572 aa11.28□□□□□ -0.6
SREBF1-209ENST00000470247 VIPR1P32241 457 aa11.28□□□□□ -0.6
SREBF1-209ENST00000470247 MMP12P39900 470 aa11.28□□□□□ -0.6
SREBF1-209ENST00000470247 MAGEA4P43358 317 aa11.28□□□□□ -0.6
SREBF1-209ENST00000470247 CXCL12P48061 93 aa11.28□□□□□ -0.6
SREBF1-209ENST00000470247 TPMTP51580 245 aa11.28□□□□□ -0.6
SREBF1-209ENST00000470247 SUOXP51687 545 aa11.28□□□□□ -0.6
SREBF1-209ENST00000470247 POU6F1Q14863 301 aa11.28□□□□□ -0.6
SREBF1-209ENST00000470247 TAF1AQ15573 450 aaPredicted RBP11.28□□□□□ -0.6
SREBF1-209ENST00000470247 CNGA3Q16281 694 aa11.28□□□□□ -0.6
SREBF1-209ENST00000470247 TMEM52BQ4KMG9 183 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms