RNA–Protein interactions for RNA: ENST00000470232.1

SYNGAP1-205, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 3

Gene SYNGAP1, Length 394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-205ENST00000470232 CARD16Q5EG05 197 aa9.01□□□□□ -0.97
SYNGAP1-205ENST00000470232 TPRG1LQ5T0D9 272 aa9.01□□□□□ -0.97
SYNGAP1-205ENST00000470232 ACBD5Q5T8D3 534 aaPredicted RBP9.01□□□□□ -0.97
SYNGAP1-205ENST00000470232 TAF3Q5VWG9 929 aa9.01□□□□□ -0.97
SYNGAP1-205ENST00000470232 LRRC31Q6UY01 552 aa9.01□□□□□ -0.97
SYNGAP1-205ENST00000470232 RD3Q7Z3Z2 195 aa9.01□□□□□ -0.97
SYNGAP1-205ENST00000470232 SETD3Q86TU7 594 aaPredicted RBP9.01□□□□□ -0.97
SYNGAP1-205ENST00000470232 VPS36Q86VN1 386 aa9.01□□□□□ -0.97
SYNGAP1-205ENST00000470232 PCDH20Q8N6Y1 951 aaKnown RBP9.01□□□□□ -0.97
SYNGAP1-205ENST00000470232 DCAF4L2Q8NA75 395 aa9.01□□□□□ -0.97
SYNGAP1-205ENST00000470232 EHBP1Q8NDI1 1231 aa9.01□□□□□ -0.97
SYNGAP1-205ENST00000470232 CXorf40AQ8TE69 158 aa9.01□□□□□ -0.97
SYNGAP1-205ENST00000470232 TFAP2BQ92481 460 aa9.01□□□□□ -0.97
SYNGAP1-205ENST00000470232 IQCDQ96DY2 449 aa9.01□□□□□ -0.97
SYNGAP1-205ENST00000470232 SLC45A3Q96JT2 553 aa9.01□□□□□ -0.97
SYNGAP1-205ENST00000470232 HS3ST6Q96QI5 342 aa9.01□□□□□ -0.97
SYNGAP1-205ENST00000470232 DNAJC7Q99615 494 aa9.01□□□□□ -0.97
SYNGAP1-205ENST00000470232 CHP1Q99653 195 aa9.01□□□□□ -0.97
SYNGAP1-205ENST00000470232 TUBGCP2Q9BSJ2 902 aa9.01□□□□□ -0.97
SYNGAP1-205ENST00000470232 ASPSCR1Q9BZE9 553 aa9.01□□□□□ -0.97
SYNGAP1-205ENST00000470232 TNKS2Q9H2K2 1166 aa9.01□□□□□ -0.97
SYNGAP1-205ENST00000470232 ANKZF1Q9H8Y5 726 aa9.01□□□□□ -0.97
SYNGAP1-205ENST00000470232 LRIT1Q9P2V4 623 aa9.01□□□□□ -0.97
SYNGAP1-205ENST00000470232 VPS51Q9UID3 782 aa9.01□□□□□ -0.97
SYNGAP1-205ENST00000470232 COQ4Q9Y3A0 265 aa9.01□□□□□ -0.97
SYNGAP1-205ENST00000470232 REXO2Q9Y3B8 237 aaKnown RBP9.01□□□□□ -0.97
SYNGAP1-205ENST00000470232 PCDHGA3Q9Y5H0 932 aa9.01□□□□□ -0.97
SYNGAP1-205ENST00000470232 WASF2Q9Y6W5 498 aa9.01□□□□□ -0.97
SYNGAP1-205ENST00000470232 SYNJ2BP-COX16A0A087WUM0 186 aa9□□□□□ -0.97
SYNGAP1-205ENST00000470232 ERICH4A6NGS2 130 aa9□□□□□ -0.97
SYNGAP1-205ENST00000470232 PRR19A6NJB7 356 aa9□□□□□ -0.97
SYNGAP1-205ENST00000470232 C16orf96A6NNT2 1141 aa9□□□□□ -0.97
SYNGAP1-205ENST00000470232 IPO7O95373 1038 aaKnown RBP9□□□□□ -0.97
SYNGAP1-205ENST00000470232 FGFR1OPO95684 399 aaKnown RBP9□□□□□ -0.97
SYNGAP1-205ENST00000470232 CPNE6O95741 557 aa9□□□□□ -0.97
SYNGAP1-205ENST00000470232 TUBBP07437 444 aa9□□□□□ -0.97
SYNGAP1-205ENST00000470232 KRT7P08729 469 aa9□□□□□ -0.97
SYNGAP1-205ENST00000470232 RHOXF2BP0C7M4 288 aa9□□□□□ -0.97
SYNGAP1-205ENST00000470232 LIFP15018 202 aa9□□□□□ -0.97
SYNGAP1-205ENST00000470232 ELAVL4P26378 380 aaKnown RBP9□□□□□ -0.97
SYNGAP1-205ENST00000470232 UGT1A3P35503 534 aa9□□□□□ -0.97
SYNGAP1-205ENST00000470232 NOP2P46087 812 aaKnown RBP9□□□□□ -0.97
SYNGAP1-205ENST00000470232 RPL34P49207 117 aaKnown RBP9□□□□□ -0.97
SYNGAP1-205ENST00000470232 ZBED6P86452 979 aa9□□□□□ -0.97
SYNGAP1-205ENST00000470232 CKAP4Q07065 602 aaKnown RBP9□□□□□ -0.97
SYNGAP1-205ENST00000470232 EIF4EBP2Q13542 120 aaPredicted RBP9□□□□□ -0.97
SYNGAP1-205ENST00000470232 TRA2AQ13595 282 aaKnown RBP eCLIP9□□□□□ -0.97
SYNGAP1-205ENST00000470232 EDRF1Q3B7T1 1238 aa9□□□□□ -0.97
SYNGAP1-205ENST00000470232 C5orf22Q49AR2 442 aa9□□□□□ -0.97
SYNGAP1-205ENST00000470232 COBLL1Q53SF7 1204 aa9□□□□□ -0.97
SYNGAP1-205ENST00000470232 ANKRD40Q6AI12 368 aa9□□□□□ -0.97
SYNGAP1-205ENST00000470232 ENPP7Q6UWV6 458 aa9□□□□□ -0.97
SYNGAP1-205ENST00000470232 PARS2Q7L3T8 475 aaKnown RBP9□□□□□ -0.97
SYNGAP1-205ENST00000470232 HDXQ7Z353 690 aa9□□□□□ -0.97
SYNGAP1-205ENST00000470232 SPRED1Q7Z699 444 aa9□□□□□ -0.97
SYNGAP1-205ENST00000470232 SLITRK4Q8IW52 837 aa9□□□□□ -0.97
SYNGAP1-205ENST00000470232 PLPP6Q8IY26 295 aa9□□□□□ -0.97
SYNGAP1-205ENST00000470232 GUF1Q8N442 669 aaKnown RBP9□□□□□ -0.97
SYNGAP1-205ENST00000470232 GALNT11Q8NCW6 608 aa9□□□□□ -0.97
SYNGAP1-205ENST00000470232 GPR156Q8NFN8 814 aa9□□□□□ -0.97
SYNGAP1-205ENST00000470232 OR52K2Q8NGK3 314 aa9□□□□□ -0.97
SYNGAP1-205ENST00000470232 STK32AQ8WU08 396 aa9□□□□□ -0.97
SYNGAP1-205ENST00000470232 TSACCQ96A04 125 aaPredicted RBP9□□□□□ -0.97
SYNGAP1-205ENST00000470232 PSMB7Q99436 277 aa9□□□□□ -0.97
SYNGAP1-205ENST00000470232 TSG101Q99816 390 aa9□□□□□ -0.97
SYNGAP1-205ENST00000470232 RHOXF2Q9BQY4 288 aa9□□□□□ -0.97
SYNGAP1-205ENST00000470232 INTS2Q9H0H0 1204 aaKnown RBP9□□□□□ -0.97
SYNGAP1-205ENST00000470232 SIK2Q9H0K1 926 aa9□□□□□ -0.97
SYNGAP1-205ENST00000470232 ACBD3Q9H3P7 528 aa9□□□□□ -0.97
SYNGAP1-205ENST00000470232 ZDHHC6Q9H6R6 413 aa9□□□□□ -0.97
SYNGAP1-205ENST00000470232 PRDM8Q9NQV8 689 aa9□□□□□ -0.97
SYNGAP1-205ENST00000470232 TMEM51Q9NW97 253 aa9□□□□□ -0.97
SYNGAP1-205ENST00000470232 DDIT4Q9NX09 232 aa9□□□□□ -0.97
SYNGAP1-205ENST00000470232 ZKSCAN7Q9P0L1 754 aaPredicted RBP9□□□□□ -0.97
SYNGAP1-205ENST00000470232 COX16Q9P0S2 106 aa9□□□□□ -0.97
SYNGAP1-205ENST00000470232 HECAQ9UBI9 543 aaPredicted RBP9□□□□□ -0.97
SYNGAP1-205ENST00000470232 RAB21Q9UL25 225 aa9□□□□□ -0.97
SYNGAP1-205ENST00000470232 HS3ST4Q9Y661 456 aa9□□□□□ -0.97
SYNGAP1-205ENST00000470232 DOPEY1Q5JWR5 2465 aa8.99□□□□□ -0.97
SYNGAP1-205ENST00000470232 CELSR2Q9HCU4 2923 aa8.99□□□□□ -0.97
SYNGAP1-205ENST00000470232 CRYBG3Q68DQ2 2970 aa8.99□□□□□ -0.97
SYNGAP1-205ENST00000470232 A0A1W2PQJ5 194 aa8.99□□□□□ -0.97
SYNGAP1-205ENST00000470232 EFCAB7A8K855 629 aa8.99□□□□□ -0.97
SYNGAP1-205ENST00000470232 EIF3CLB5ME19 914 aaKnown RBP8.99□□□□□ -0.97
SYNGAP1-205ENST00000470232 MKRN2OSH3BPM6 223 aa8.99□□□□□ -0.97
SYNGAP1-205ENST00000470232 MED7O43513 233 aa8.99□□□□□ -0.97
SYNGAP1-205ENST00000470232 KRT86O43790 486 aa8.99□□□□□ -0.97
SYNGAP1-205ENST00000470232 NUDT21O43809 227 aaKnown RBP8.99□□□□□ -0.97
SYNGAP1-205ENST00000470232 GLI1P08151 1106 aa8.99□□□□□ -0.97
SYNGAP1-205ENST00000470232 CELA2BP08218 269 aaPredicted RBP8.99□□□□□ -0.97
SYNGAP1-205ENST00000470232 BRD2P25440 801 aaKnown RBP8.99□□□□□ -0.97
SYNGAP1-205ENST00000470232 MAP4P27816 1152 aaKnown RBP8.99□□□□□ -0.97
SYNGAP1-205ENST00000470232 CSTF2P33240 577 aaKnown RBP eCLIP8.99□□□□□ -0.97
SYNGAP1-205ENST00000470232 MAN1A1P33908 653 aa8.99□□□□□ -0.97
SYNGAP1-205ENST00000470232 IGFALSP35858 605 aa8.99□□□□□ -0.97
SYNGAP1-205ENST00000470232 GPD2P43304 727 aa8.99□□□□□ -0.97
SYNGAP1-205ENST00000470232 CCNHP51946 323 aaPredicted RBP8.99□□□□□ -0.97
SYNGAP1-205ENST00000470232 MLLT10P55197 1068 aa8.99□□□□□ -0.97
SYNGAP1-205ENST00000470232 SRP54P61011 504 aaKnown RBP8.99□□□□□ -0.97
SYNGAP1-205ENST00000470232 CETN1Q12798 172 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms