RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 HAUS5O94927 633 aa18.21■□□□□ 0.5
SMC4-211ENST00000469858 GOT2P00505 430 aaKnown RBP18.21■□□□□ 0.5
SMC4-211ENST00000469858 CYP17A1P05093 508 aa18.21■□□□□ 0.5
SMC4-211ENST00000469858 WEE1P30291 646 aa18.21■□□□□ 0.5
SMC4-211ENST00000469858 HADHAP40939 763 aa18.21■□□□□ 0.5
SMC4-211ENST00000469858 ABL2P42684 1182 aa18.21■□□□□ 0.5
SMC4-211ENST00000469858 ZNF140P52738 457 aaPredicted RBP18.21■□□□□ 0.5
SMC4-211ENST00000469858 BCL2L1Q07817 233 aa18.21■□□□□ 0.5
SMC4-211ENST00000469858 USP10Q14694 798 aaKnown RBP18.21■□□□□ 0.5
SMC4-211ENST00000469858 PTPRRQ15256 657 aa18.21■□□□□ 0.5
SMC4-211ENST00000469858 ACCSLQ4AC99 568 aa18.21■□□□□ 0.5
SMC4-211ENST00000469858 TCEAL5Q5H9L2 206 aa18.21■□□□□ 0.5
SMC4-211ENST00000469858 ARMC12Q5T9G4 340 aa18.21■□□□□ 0.5
SMC4-211ENST00000469858 C22orf39Q6P5X5 142 aa18.21■□□□□ 0.5
SMC4-211ENST00000469858 RGS9BPQ6ZS82 235 aa18.21■□□□□ 0.5
SMC4-211ENST00000469858 KIAA0408Q6ZU52 694 aa18.21■□□□□ 0.5
SMC4-211ENST00000469858 PNPLA1Q8N8W4 532 aa18.21■□□□□ 0.5
SMC4-211ENST00000469858 OR2AP1Q8NGE2 309 aa18.21■□□□□ 0.5
SMC4-211ENST00000469858 OSCP1Q8WVF1 389 aa18.21■□□□□ 0.5
SMC4-211ENST00000469858 ZNF75CPQ92670 426 aaPredicted RBP18.21■□□□□ 0.5
SMC4-211ENST00000469858 TIFAQ96CG3 184 aa18.21■□□□□ 0.5
SMC4-211ENST00000469858 ELAC2Q9BQ52 826 aaKnown RBP18.21■□□□□ 0.5
SMC4-211ENST00000469858 MARCH4Q9P2E8 410 aaPredicted RBP18.21■□□□□ 0.5
SMC4-211ENST00000469858 DCDC2Q9UHG0 476 aa18.21■□□□□ 0.5
SMC4-211ENST00000469858 A0A096LPK6 155 aa18.2■□□□□ 0.5
SMC4-211ENST00000469858 CXorf51AA0A1B0GTR3 108 aa18.2■□□□□ 0.5
SMC4-211ENST00000469858 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.2■□□□□ 0.5
SMC4-211ENST00000469858 FAM95CA0A1B0GW59 222 aa18.2■□□□□ 0.5
SMC4-211ENST00000469858 CCDC162PA2VCL2 907 aa18.2■□□□□ 0.5
SMC4-211ENST00000469858 C2orf81A6NN90 581 aa18.2■□□□□ 0.5
SMC4-211ENST00000469858 PGLSO95336 258 aa18.2■□□□□ 0.5
SMC4-211ENST00000469858 NEFHP12036 1026 aa18.2■□□□□ 0.5
SMC4-211ENST00000469858 MAPK8P45983 427 aa18.2■□□□□ 0.5
SMC4-211ENST00000469858 CSNK1DP48730 415 aa18.2■□□□□ 0.5
SMC4-211ENST00000469858 SNRPD1P62314 119 aaKnown RBP18.2■□□□□ 0.5
SMC4-211ENST00000469858 IRX4P78413 519 aa18.2■□□□□ 0.5
SMC4-211ENST00000469858 ECT2LQ008S8 904 aa18.2■□□□□ 0.5
SMC4-211ENST00000469858 EML3Q32P44 896 aa18.2■□□□□ 0.5
SMC4-211ENST00000469858 N4BP2L1Q5TBK1 243 aaPredicted RBP18.2■□□□□ 0.5
SMC4-211ENST00000469858 C16orf46Q6P387 395 aa18.2■□□□□ 0.5
SMC4-211ENST00000469858 CNSTQ6PJW8 725 aa18.2■□□□□ 0.5
SMC4-211ENST00000469858 RAPH1Q70E73 1250 aa18.2■□□□□ 0.5
SMC4-211ENST00000469858 GPR149Q86SP6 731 aa18.2■□□□□ 0.5
SMC4-211ENST00000469858 LDB1Q86U70 411 aaPredicted RBP18.2■□□□□ 0.5
SMC4-211ENST00000469858 ADIPOR2Q86V24 386 aa18.2■□□□□ 0.5
SMC4-211ENST00000469858 CILP2Q8IUL8 1156 aa18.2■□□□□ 0.5
SMC4-211ENST00000469858 SLC41A1Q8IVJ1 513 aa18.2■□□□□ 0.5
SMC4-211ENST00000469858 CCDC63Q8NA47 563 aa18.2■□□□□ 0.5
SMC4-211ENST00000469858 OR4K2Q8NGD2 314 aa18.2■□□□□ 0.5
SMC4-211ENST00000469858 BPIFB1Q8TDL5 484 aa18.2■□□□□ 0.5
SMC4-211ENST00000469858 SMARCD2Q92925 531 aa18.2■□□□□ 0.5
SMC4-211ENST00000469858 ASIC4Q96FT7 647 aa18.2■□□□□ 0.5
SMC4-211ENST00000469858 NLE1Q9NVX2 485 aaPredicted RBP18.2■□□□□ 0.5
SMC4-211ENST00000469858 RIMKLBQ9ULI2 386 aa18.2■□□□□ 0.5
SMC4-211ENST00000469858 MPOP05164 745 aa18.19■□□□□ 0.5
SMC4-211ENST00000469858 ADH5P11766 374 aa18.19■□□□□ 0.5
SMC4-211ENST00000469858 BMP1P13497 986 aa18.19■□□□□ 0.5
SMC4-211ENST00000469858 CTPS1P17812 591 aa18.19■□□□□ 0.5
SMC4-211ENST00000469858 PGGT1BP53609 377 aa18.19■□□□□ 0.5
SMC4-211ENST00000469858 IRF9Q00978 393 aa18.19■□□□□ 0.5
SMC4-211ENST00000469858 SULT2A1Q06520 285 aa18.19■□□□□ 0.5
SMC4-211ENST00000469858 HYAL1Q12794 435 aa18.19■□□□□ 0.5
SMC4-211ENST00000469858 DMC1Q14565 340 aa18.19■□□□□ 0.5
SMC4-211ENST00000469858 ZNF789Q5FWF6 425 aa18.19■□□□□ 0.5
SMC4-211ENST00000469858 MBLAC2Q68D91 279 aa18.19■□□□□ 0.5
SMC4-211ENST00000469858 AHI1Q8N157 1196 aa18.19■□□□□ 0.5
SMC4-211ENST00000469858 GPATCH11Q8N954 259 aa18.19■□□□□ 0.5
SMC4-211ENST00000469858 MYLIPQ8WY64 445 aa18.19■□□□□ 0.5
SMC4-211ENST00000469858 CDKN2AIPNLQ96HQ2 116 aa18.19■□□□□ 0.5
SMC4-211ENST00000469858 SEC16BQ96JE7 1060 aa18.19■□□□□ 0.5
SMC4-211ENST00000469858 ZFYVE19Q96K21 471 aa18.19■□□□□ 0.5
SMC4-211ENST00000469858 CABS1Q96KC9 395 aa18.19■□□□□ 0.5
SMC4-211ENST00000469858 MECRQ9BV79 373 aa18.19■□□□□ 0.5
SMC4-211ENST00000469858 ATP13A3Q9H7F0 1226 aa18.19■□□□□ 0.5
SMC4-211ENST00000469858 SLCO1B3Q9NPD5 702 aa18.19■□□□□ 0.5
SMC4-211ENST00000469858 SLCO3A1Q9UIG8 710 aa18.19■□□□□ 0.5
SMC4-211ENST00000469858 REV3LO60673 3130 aa18.19■□□□□ 0.5
SMC4-211ENST00000469858 C5orf42Q9H799 3197 aa18.19■□□□□ 0.5
SMC4-211ENST00000469858 A0A0U1RQS6 177 aa18.19■□□□□ 0.5
SMC4-211ENST00000469858 EBAG9O00559 213 aa18.19■□□□□ 0.5
SMC4-211ENST00000469858 PHGDHO43175 533 aaKnown RBP18.19■□□□□ 0.5
SMC4-211ENST00000469858 C2P06681 752 aa18.19■□□□□ 0.5
SMC4-211ENST00000469858 LPOP22079 712 aaPredicted RBP18.19■□□□□ 0.5
SMC4-211ENST00000469858 SP100P23497 879 aaPredicted RBP18.19■□□□□ 0.5
SMC4-211ENST00000469858 GRIA4P48058 902 aa18.19■□□□□ 0.5
SMC4-211ENST00000469858 GEN1Q17RS7 908 aa18.19■□□□□ 0.5
SMC4-211ENST00000469858 TMEM215Q68D42 235 aa18.19■□□□□ 0.5
SMC4-211ENST00000469858 KYAT3Q6YP21 454 aaKnown RBP18.19■□□□□ 0.5
SMC4-211ENST00000469858 MFSD6LQ8IWD5 586 aa18.19■□□□□ 0.5
SMC4-211ENST00000469858 LMNTD2Q8IXW0 634 aa18.19■□□□□ 0.5
SMC4-211ENST00000469858 CACNA2D3Q8IZS8 1091 aa18.19■□□□□ 0.5
SMC4-211ENST00000469858 ISG20Q96AZ6 181 aaKnown RBP18.19■□□□□ 0.5
SMC4-211ENST00000469858 ELMO2Q96JJ3 720 aa18.19■□□□□ 0.5
SMC4-211ENST00000469858 SLC2A11Q9BYW1 496 aa18.19■□□□□ 0.5
SMC4-211ENST00000469858 PITPNM3Q9BZ71 974 aa18.19■□□□□ 0.5
SMC4-211ENST00000469858 NSUN3Q9H649 340 aaKnown RBP18.19■□□□□ 0.5
SMC4-211ENST00000469858 MANSC1Q9H8J5 431 aa18.19■□□□□ 0.5
SMC4-211ENST00000469858 POLR3BQ9NW08 1133 aaPredicted RBP18.19■□□□□ 0.5
SMC4-211ENST00000469858 EMCNQ9ULC0 261 aa18.19■□□□□ 0.5
SMC4-211ENST00000469858 TRAFD1O14545 582 aaPredicted RBP18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms