RNA–Protein interactions for RNA: ENST00000469443.2

PHGDH-204, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 653 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-204ENST00000469443 MARCH9Q86YJ5 346 aa18.36■□□□□ 0.53
PHGDH-204ENST00000469443 PHACTR4Q8IZ21 702 aa18.36■□□□□ 0.53
PHGDH-204ENST00000469443 PQLC3Q8N755 202 aa18.36■□□□□ 0.53
PHGDH-204ENST00000469443 TC2NQ8N9U0 490 aa18.36■□□□□ 0.53
PHGDH-204ENST00000469443 FAM181AQ8N9Y4 354 aa18.36■□□□□ 0.53
PHGDH-204ENST00000469443 DMXL2Q8TDJ6 3036 aa18.36■□□□□ 0.53
PHGDH-204ENST00000469443 LMX1AQ8TE12 382 aa18.36■□□□□ 0.53
PHGDH-204ENST00000469443 PDCD6IPQ8WUM4 868 aaKnown RBP18.36■□□□□ 0.53
PHGDH-204ENST00000469443 RAPGEF5Q92565 580 aa18.36■□□□□ 0.53
PHGDH-204ENST00000469443 MAML1Q92585 1016 aa18.36■□□□□ 0.53
PHGDH-204ENST00000469443 FATE1Q969F0 183 aa18.36■□□□□ 0.53
PHGDH-204ENST00000469443 APOLD1Q96LR9 279 aa18.36■□□□□ 0.53
PHGDH-204ENST00000469443 TBATAQ96M53 351 aa18.36■□□□□ 0.53
PHGDH-204ENST00000469443 TSGA13Q96PP4 275 aa18.36■□□□□ 0.53
PHGDH-204ENST00000469443 APOOQ9BUR5 198 aa18.36■□□□□ 0.53
PHGDH-204ENST00000469443 SPASTQ9UBP0 616 aa18.36■□□□□ 0.53
PHGDH-204ENST00000469443 B4GALT6Q9UBX8 382 aa18.36■□□□□ 0.53
PHGDH-204ENST00000469443 APOBEC3BQ9UH17 382 aaKnown RBP18.36■□□□□ 0.53
PHGDH-204ENST00000469443 PNMA8BQ9ULN7 279 aaPredicted RBP18.36■□□□□ 0.53
PHGDH-204ENST00000469443 FREM2Q5SZK8 3169 aa18.36■□□□□ 0.53
PHGDH-204ENST00000469443 ANKRD11Q6UB99 2663 aaPredicted RBP18.35■□□□□ 0.53
PHGDH-204ENST00000469443 LRRD1A4D1F6 860 aa18.35■□□□□ 0.53
PHGDH-204ENST00000469443 ZNF487B1APH4 448 aa18.35■□□□□ 0.53
PHGDH-204ENST00000469443 MATN3O15232 486 aa18.35■□□□□ 0.53
PHGDH-204ENST00000469443 KRT37O76014 449 aa18.35■□□□□ 0.53
PHGDH-204ENST00000469443 RECQL5O94762 991 aaPredicted RBP18.35■□□□□ 0.53
PHGDH-204ENST00000469443 MAP3K6O95382 1288 aa18.35■□□□□ 0.53
PHGDH-204ENST00000469443 CAPNS1P04632 268 aa18.35■□□□□ 0.53
PHGDH-204ENST00000469443 PCCBP05166 539 aa18.35■□□□□ 0.53
PHGDH-204ENST00000469443 CKMT1AP12532 417 aa18.35■□□□□ 0.53
PHGDH-204ENST00000469443 MX2P20592 715 aa18.35■□□□□ 0.53
PHGDH-204ENST00000469443 CCNCP24863 283 aa18.35■□□□□ 0.53
PHGDH-204ENST00000469443 NFKBIAP25963 317 aa18.35■□□□□ 0.53
PHGDH-204ENST00000469443 HNF1BP35680 557 aa18.35■□□□□ 0.53
PHGDH-204ENST00000469443 INPP5AQ14642 412 aa18.35■□□□□ 0.53
PHGDH-204ENST00000469443 NFATC4Q14934 902 aa18.35■□□□□ 0.53
PHGDH-204ENST00000469443 TCEAL1Q15170 157 aa18.35■□□□□ 0.53
PHGDH-204ENST00000469443 RBFAQ8N0V3 343 aa18.35■□□□□ 0.53
PHGDH-204ENST00000469443 RNF157Q96PX1 679 aa18.35■□□□□ 0.53
PHGDH-204ENST00000469443 POLR1EQ9GZS1 481 aaKnown RBP18.35■□□□□ 0.53
PHGDH-204ENST00000469443 TCEAL2Q9H3H9 227 aaPredicted RBP18.35■□□□□ 0.53
PHGDH-204ENST00000469443 AMACRQ9UHK6 382 aa18.35■□□□□ 0.53
PHGDH-204ENST00000469443 PHTF1Q9UMS5 762 aa18.35■□□□□ 0.53
PHGDH-204ENST00000469443 A8MX80 341 aa18.34■□□□□ 0.53
PHGDH-204ENST00000469443 JUPP14923 745 aa18.34■□□□□ 0.53
PHGDH-204ENST00000469443 GM2AP17900 193 aa18.34■□□□□ 0.53
PHGDH-204ENST00000469443 HTR1BP28222 390 aa18.34■□□□□ 0.53
PHGDH-204ENST00000469443 VIPR1P32241 457 aa18.34■□□□□ 0.53
PHGDH-204ENST00000469443 DUSP3P51452 185 aaPredicted RBP18.34■□□□□ 0.53
PHGDH-204ENST00000469443 CLDN6P56747 220 aa18.34■□□□□ 0.53
PHGDH-204ENST00000469443 E2F1Q01094 437 aa18.34■□□□□ 0.53
PHGDH-204ENST00000469443 PPARDQ03181 441 aa18.34■□□□□ 0.53
PHGDH-204ENST00000469443 GBE1Q04446 702 aa18.34■□□□□ 0.53
PHGDH-204ENST00000469443 CAMK2BQ13554 666 aa18.34■□□□□ 0.53
PHGDH-204ENST00000469443 PRRT3Q5FWE3 981 aa18.34■□□□□ 0.53
PHGDH-204ENST00000469443 FAXCQ5TGI0 409 aa18.34■□□□□ 0.53
PHGDH-204ENST00000469443 HES3Q5TGS1 186 aa18.34■□□□□ 0.53
PHGDH-204ENST00000469443 ZCCHC8Q6NZY4 707 aaKnown RBP18.34■□□□□ 0.53
PHGDH-204ENST00000469443 VSIG1Q86XK7 387 aa18.34■□□□□ 0.53
PHGDH-204ENST00000469443 SEMA3CQ99985 751 aa18.34■□□□□ 0.53
PHGDH-204ENST00000469443 ANP32EQ9BTT0 268 aa18.34■□□□□ 0.53
PHGDH-204ENST00000469443 SLC13A1Q9BZW2 595 aa18.34■□□□□ 0.53
PHGDH-204ENST00000469443 CCDC86Q9H6F5 360 aaKnown RBP18.34■□□□□ 0.53
PHGDH-204ENST00000469443 USP29Q9HBJ7 922 aa18.34■□□□□ 0.53
PHGDH-204ENST00000469443 EVA1BQ9NVM1 165 aa18.34■□□□□ 0.53
PHGDH-204ENST00000469443 DTLQ9NZJ0 730 aa18.34■□□□□ 0.53
PHGDH-204ENST00000469443 ARHGEF17Q96PE2 2063 aaPredicted RBP18.34■□□□□ 0.53
PHGDH-204ENST00000469443 ZZEF1O43149 2961 aa18.33■□□□□ 0.53
PHGDH-204ENST00000469443 APC2O95996 2303 aa18.33■□□□□ 0.53
PHGDH-204ENST00000469443 LY6G6EA0A0G2JKS1 128 aa18.33■□□□□ 0.52
PHGDH-204ENST00000469443 TRABD2BA6NFA1 517 aa18.33■□□□□ 0.52
PHGDH-204ENST00000469443 TPP1O14773 563 aa18.33■□□□□ 0.52
PHGDH-204ENST00000469443 PGLSO95336 258 aa18.33■□□□□ 0.52
PHGDH-204ENST00000469443 CYP2A6P11509 494 aaPredicted RBP18.33■□□□□ 0.52
PHGDH-204ENST00000469443 SLC1A1P43005 524 aa18.33■□□□□ 0.52
PHGDH-204ENST00000469443 BLKP51451 505 aa18.33■□□□□ 0.52
PHGDH-204ENST00000469443 ITKQ08881 620 aa18.33■□□□□ 0.52
PHGDH-204ENST00000469443 SLC10A2Q12908 348 aaPredicted RBP18.33■□□□□ 0.52
PHGDH-204ENST00000469443 ACOX1Q15067 660 aa18.33■□□□□ 0.52
PHGDH-204ENST00000469443 CNGA3Q16281 694 aa18.33■□□□□ 0.52
PHGDH-204ENST00000469443 DEFB133Q30KQ1 61 aa18.33■□□□□ 0.52
PHGDH-204ENST00000469443 ARMC12Q5T9G4 340 aa18.33■□□□□ 0.52
PHGDH-204ENST00000469443 LRRC38Q5VT99 294 aa18.33■□□□□ 0.52
PHGDH-204ENST00000469443 ALG1LQ6GMV1 187 aa18.33■□□□□ 0.52
PHGDH-204ENST00000469443 PDCD7Q8N8D1 485 aaKnown RBP18.33■□□□□ 0.52
PHGDH-204ENST00000469443 PLA2G15Q8NCC3 412 aa18.33■□□□□ 0.52
PHGDH-204ENST00000469443 ATL2Q8NHH9 583 aa18.33■□□□□ 0.52
PHGDH-204ENST00000469443 HDAC11Q96DB2 347 aa18.33■□□□□ 0.52
PHGDH-204ENST00000469443 COQ10AQ96MF6 247 aa18.33■□□□□ 0.52
PHGDH-204ENST00000469443 ZNF830Q96NB3 372 aaPredicted RBP18.33■□□□□ 0.52
PHGDH-204ENST00000469443 IL12RB2Q99665 862 aa18.33■□□□□ 0.52
PHGDH-204ENST00000469443 LRRC61Q9BV99 259 aa18.33■□□□□ 0.52
PHGDH-204ENST00000469443 HAUS2Q9NVX0 235 aa18.33■□□□□ 0.52
PHGDH-204ENST00000469443 RBM22Q9NW64 420 aaKnown RBP eCLIP18.33■□□□□ 0.52
PHGDH-204ENST00000469443 SALL4Q9UJQ4 1053 aa18.33■□□□□ 0.52
PHGDH-204ENST00000469443 OR1A2Q9Y585 309 aa18.33■□□□□ 0.52
PHGDH-204ENST00000469443 RAI2Q9Y5P3 530 aa18.33■□□□□ 0.52
PHGDH-204ENST00000469443 U3KQA8 63 aa18.33■□□□□ 0.52
PHGDH-204ENST00000469443 C3orf70A6NLC5 250 aaPredicted RBP18.32■□□□□ 0.52
PHGDH-204ENST00000469443 SRRM3A6NNA2 597 aaPredicted RBP18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms