RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 LNX1Q8TBB1 728 aaPredicted RBP4.89□□□□□ -1.63
SF3B1-207ENST00000468925 ZNF564Q8TBZ8 553 aaPredicted RBP4.89□□□□□ -1.63
SF3B1-207ENST00000468925 NETO1Q8TDF5 533 aa4.89□□□□□ -1.63
SF3B1-207ENST00000468925 MZB1Q8WU39 189 aa4.89□□□□□ -1.63
SF3B1-207ENST00000468925 SLC44A1Q8WWI5 657 aa4.89□□□□□ -1.63
SF3B1-207ENST00000468925 JPH3Q8WXH2 748 aaPredicted RBP4.89□□□□□ -1.63
SF3B1-207ENST00000468925 KLHL6Q8WZ60 621 aa4.89□□□□□ -1.63
SF3B1-207ENST00000468925 HSPH1Q92598 858 aa4.89□□□□□ -1.63
SF3B1-207ENST00000468925 ISL2Q96A47 359 aa4.89□□□□□ -1.63
SF3B1-207ENST00000468925 LRRC39Q96DD0 335 aa4.89□□□□□ -1.63
SF3B1-207ENST00000468925 ZNF496Q96IT1 587 aaPredicted RBP4.89□□□□□ -1.63
SF3B1-207ENST00000468925 B3GALT6Q96L58 329 aa4.89□□□□□ -1.63
SF3B1-207ENST00000468925 C9orf72Q96LT7 481 aa4.89□□□□□ -1.63
SF3B1-207ENST00000468925 AGAP4Q96P64 663 aa4.89□□□□□ -1.63
SF3B1-207ENST00000468925 PAFAH2Q99487 392 aa4.89□□□□□ -1.63
SF3B1-207ENST00000468925 EYA3Q99504 573 aa4.89□□□□□ -1.63
SF3B1-207ENST00000468925 TM9SF2Q99805 663 aa4.89□□□□□ -1.63
SF3B1-207ENST00000468925 DCUN1D5Q9BTE7 237 aa4.89□□□□□ -1.63
SF3B1-207ENST00000468925 MYL10Q9BUA6 226 aa4.89□□□□□ -1.63
SF3B1-207ENST00000468925 CHID1Q9BWS9 393 aa4.89□□□□□ -1.63
SF3B1-207ENST00000468925 EMILIN2Q9BXX0 1053 aa4.89□□□□□ -1.63
SF3B1-207ENST00000468925 THAP2Q9H0W7 228 aa4.89□□□□□ -1.63
SF3B1-207ENST00000468925 TRPV6Q9H1D0 765 aa4.89□□□□□ -1.63
SF3B1-207ENST00000468925 MMP27Q9H306 513 aa4.89□□□□□ -1.63
SF3B1-207ENST00000468925 SYNDIG1Q9H7V2 258 aa4.89□□□□□ -1.63
SF3B1-207ENST00000468925 NANOGQ9H9S0 305 aa4.89□□□□□ -1.63
SF3B1-207ENST00000468925 RPRD1BQ9NQG5 326 aaKnown RBP4.89□□□□□ -1.63
SF3B1-207ENST00000468925 ZNF277Q9NRM2 450 aaPredicted RBP4.89□□□□□ -1.63
SF3B1-207ENST00000468925 AASDHPPTQ9NRN7 309 aa4.89□□□□□ -1.63
SF3B1-207ENST00000468925 CNNM1Q9NRU3 951 aa4.89□□□□□ -1.63
SF3B1-207ENST00000468925 TOPORSQ9NS56 1045 aaPredicted RBP4.89□□□□□ -1.63
SF3B1-207ENST00000468925 FARSBQ9NSD9 589 aaKnown RBP4.89□□□□□ -1.63
SF3B1-207ENST00000468925 TMEM39AQ9NV64 488 aa4.89□□□□□ -1.63
SF3B1-207ENST00000468925 BARHL2Q9NY43 387 aa4.89□□□□□ -1.63
SF3B1-207ENST00000468925 B3GNT2Q9NY97 397 aa4.89□□□□□ -1.63
SF3B1-207ENST00000468925 MRPL39Q9NYK5 338 aaKnown RBP4.89□□□□□ -1.63
SF3B1-207ENST00000468925 CCDC59Q9P031 241 aaKnown RBP4.89□□□□□ -1.63
SF3B1-207ENST00000468925 GCNT4Q9P109 453 aa4.89□□□□□ -1.63
SF3B1-207ENST00000468925 ARMCX1Q9P291 453 aa4.89□□□□□ -1.63
SF3B1-207ENST00000468925 SERPINB13Q9UIV8 391 aa4.89□□□□□ -1.63
SF3B1-207ENST00000468925 ZNF229Q9UJW7 825 aa4.89□□□□□ -1.63
SF3B1-207ENST00000468925 CPSF3Q9UKF6 684 aaKnown RBP4.89□□□□□ -1.63
SF3B1-207ENST00000468925 MKLN1Q9UL63 735 aa4.89□□□□□ -1.63
SF3B1-207ENST00000468925 RNF11Q9Y3C5 154 aa4.89□□□□□ -1.63
SF3B1-207ENST00000468925 MAU2Q9Y6X3 613 aa4.89□□□□□ -1.63
SF3B1-207ENST00000468925 SPATA31A6Q5VVP1 1343 aa4.89□□□□□ -1.63
SF3B1-207ENST00000468925 IRS2Q9Y4H2 1338 aa4.89□□□□□ -1.63
SF3B1-207ENST00000468925 ADAMTS7Q9UKP4 1686 aa4.89□□□□□ -1.63
SF3B1-207ENST00000468925 DIP2CQ9Y2E4 1556 aa4.88□□□□□ -1.63
SF3B1-207ENST00000468925 MYH14Q7Z406 1995 aaKnown RBP4.88□□□□□ -1.63
SF3B1-207ENST00000468925 LINC00854A0A1B0GVQ3 168 aa4.88□□□□□ -1.63
SF3B1-207ENST00000468925 A0A1W2PPW3 197 aa4.88□□□□□ -1.63
SF3B1-207ENST00000468925 E2F8A0AVK6 867 aa4.88□□□□□ -1.63
SF3B1-207ENST00000468925 EFCAB10A6NFE3 127 aa4.88□□□□□ -1.63
SF3B1-207ENST00000468925 TSPY2A6NKD2 308 aa4.88□□□□□ -1.63
SF3B1-207ENST00000468925 AQP12BA6NM10 295 aa4.88□□□□□ -1.63
SF3B1-207ENST00000468925 GSG1L2A8MUP6 293 aa4.88□□□□□ -1.63
SF3B1-207ENST00000468925 ANKRD63C9JTQ0 380 aa4.88□□□□□ -1.63
SF3B1-207ENST00000468925 LOC110117498-PIK3R3F6TDL0 507 aa4.88□□□□□ -1.63
SF3B1-207ENST00000468925 F8W810 466 aa4.88□□□□□ -1.63
SF3B1-207ENST00000468925 H3BMM5 538 aa4.88□□□□□ -1.63
SF3B1-207ENST00000468925 H7C0C1 242 aa4.88□□□□□ -1.63
SF3B1-207ENST00000468925 INO80B-WBP1J3KQ70 363 aa4.88□□□□□ -1.63
SF3B1-207ENST00000468925 M0R3G1 203 aa4.88□□□□□ -1.63
SF3B1-207ENST00000468925 CCRL2O00421 344 aa4.88□□□□□ -1.63
SF3B1-207ENST00000468925 STX7O15400 261 aaKnown RBP4.88□□□□□ -1.63
SF3B1-207ENST00000468925 EXTL3O43909 919 aa4.88□□□□□ -1.63
SF3B1-207ENST00000468925 GREM1O60565 184 aa4.88□□□□□ -1.63
SF3B1-207ENST00000468925 UGT2B11O75310 529 aa4.88□□□□□ -1.63
SF3B1-207ENST00000468925 DDHD2O94830 711 aa4.88□□□□□ -1.63
SF3B1-207ENST00000468925 SUPT7LO94864 414 aa4.88□□□□□ -1.63
SF3B1-207ENST00000468925 PAHP00439 452 aa4.88□□□□□ -1.63
SF3B1-207ENST00000468925 ERBB2P04626 1255 aa4.88□□□□□ -1.63
SF3B1-207ENST00000468925 SERPINE1P05121 402 aa4.88□□□□□ -1.63
SF3B1-207ENST00000468925 ITGAVP06756 1048 aa4.88□□□□□ -1.63
SF3B1-207ENST00000468925 CSF1RP07333 972 aa4.88□□□□□ -1.63
SF3B1-207ENST00000468925 BPGMP07738 259 aa4.88□□□□□ -1.63
SF3B1-207ENST00000468925 TSPY3P0CV98 308 aa4.88□□□□□ -1.63
SF3B1-207ENST00000468925 TSPY8P0CW00 308 aa4.88□□□□□ -1.63
SF3B1-207ENST00000468925 SYN1P17600 705 aa4.88□□□□□ -1.63
SF3B1-207ENST00000468925 TCN1P20061 433 aaPredicted RBP4.88□□□□□ -1.63
SF3B1-207ENST00000468925 BGNP21810 368 aa4.88□□□□□ -1.63
SF3B1-207ENST00000468925 GLDCP23378 1020 aa4.88□□□□□ -1.63
SF3B1-207ENST00000468925 ADSSP30520 456 aa4.88□□□□□ -1.63
SF3B1-207ENST00000468925 UGT2B10P36537 528 aa4.88□□□□□ -1.63
SF3B1-207ENST00000468925 SLC26A3P40879 764 aa4.88□□□□□ -1.63
SF3B1-207ENST00000468925 CASP3P42574 277 aa4.88□□□□□ -1.63
SF3B1-207ENST00000468925 CASP2P42575 452 aa4.88□□□□□ -1.63
SF3B1-207ENST00000468925 HTR3AP46098 478 aa4.88□□□□□ -1.63
SF3B1-207ENST00000468925 CRKP46108 304 aa4.88□□□□□ -1.63
SF3B1-207ENST00000468925 GABRB2P47870 512 aa4.88□□□□□ -1.63
SF3B1-207ENST00000468925 CPA2P48052 419 aa4.88□□□□□ -1.63
SF3B1-207ENST00000468925 NUMBP49757 651 aa4.88□□□□□ -1.63
SF3B1-207ENST00000468925 CLK1P49759 484 aaKnown RBP4.88□□□□□ -1.63
SF3B1-207ENST00000468925 ZNF135P52742 658 aaPredicted RBP4.88□□□□□ -1.63
SF3B1-207ENST00000468925 AP1S2P56377 157 aa4.88□□□□□ -1.63
SF3B1-207ENST00000468925 SLC25A3Q00325 362 aa4.88□□□□□ -1.63
SF3B1-207ENST00000468925 TSPY1Q01534 308 aa4.88□□□□□ -1.63
SF3B1-207ENST00000468925 BST1Q10588 318 aa4.88□□□□□ -1.63
SF3B1-207ENST00000468925 FSTL1Q12841 308 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms