RNA–Protein interactions for RNA: ENST00000467838.2

SEC16A-208, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

TSL 2

Gene SEC16A, Length 1,988 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-208ENST00000467838 ARHGEF38Q9NXL2 777 aa14.58□□□□□ -0.07
SEC16A-208ENST00000467838 CCDC167Q9P0B6 97 aa14.58□□□□□ -0.07
SEC16A-208ENST00000467838 MTF2Q9Y483 593 aaPredicted RBP14.58□□□□□ -0.07
SEC16A-208ENST00000467838 NYNRINQ9P2P1 1898 aaKnown RBP14.58□□□□□ -0.07
SEC16A-208ENST00000467838 SOCS2O14508 198 aa14.58□□□□□ -0.08
SEC16A-208ENST00000467838 PTGESO14684 152 aa14.58□□□□□ -0.08
SEC16A-208ENST00000467838 MATN3O15232 486 aa14.58□□□□□ -0.08
SEC16A-208ENST00000467838 MAFKO60675 156 aa14.58□□□□□ -0.08
SEC16A-208ENST00000467838 SNAI1O95863 264 aaPredicted RBP14.58□□□□□ -0.08
SEC16A-208ENST00000467838 MYL3P08590 195 aa14.58□□□□□ -0.08
SEC16A-208ENST00000467838 GPX3P22352 226 aa14.58□□□□□ -0.08
SEC16A-208ENST00000467838 SLC26A3P40879 764 aa14.58□□□□□ -0.08
SEC16A-208ENST00000467838 LEPRP48357 1165 aaKnown RBP14.58□□□□□ -0.08
SEC16A-208ENST00000467838 SLC7A2P52569 658 aa14.58□□□□□ -0.08
SEC16A-208ENST00000467838 SLC12A2P55011 1212 aa14.58□□□□□ -0.08
SEC16A-208ENST00000467838 PRKCQQ04759 706 aa14.58□□□□□ -0.08
SEC16A-208ENST00000467838 EIF4EBP2Q13542 120 aaPredicted RBP14.58□□□□□ -0.08
SEC16A-208ENST00000467838 CSHL1Q14406 222 aa14.58□□□□□ -0.08
SEC16A-208ENST00000467838 SNX17Q15036 470 aa14.58□□□□□ -0.08
SEC16A-208ENST00000467838 ACAP2Q15057 778 aa14.58□□□□□ -0.08
SEC16A-208ENST00000467838 SPATS1Q496A3 300 aa14.58□□□□□ -0.08
SEC16A-208ENST00000467838 MANEALQ5VSG8 457 aa14.58□□□□□ -0.08
SEC16A-208ENST00000467838 CST9Q5W186 159 aa14.58□□□□□ -0.08
SEC16A-208ENST00000467838 PRMT9Q6P2P2 845 aa14.58□□□□□ -0.08
SEC16A-208ENST00000467838 FUNDC1Q8IVP5 155 aa14.58□□□□□ -0.08
SEC16A-208ENST00000467838 SMG8Q8ND04 991 aaKnown RBP14.58□□□□□ -0.08
SEC16A-208ENST00000467838 FNDC8Q8TC99 324 aa14.58□□□□□ -0.08
SEC16A-208ENST00000467838 GRIN3AQ8TCU5 1115 aa14.58□□□□□ -0.08
SEC16A-208ENST00000467838 USP33Q8TEY7 942 aa14.58□□□□□ -0.08
SEC16A-208ENST00000467838 GTF3C2Q8WUA4 911 aaPredicted RBP14.58□□□□□ -0.08
SEC16A-208ENST00000467838 TMEM40Q8WWA1 233 aa14.58□□□□□ -0.08
SEC16A-208ENST00000467838 UNKQ9C0B0 810 aaKnown RBP14.58□□□□□ -0.08
SEC16A-208ENST00000467838 C8orf4Q9NR00 106 aa14.58□□□□□ -0.08
SEC16A-208ENST00000467838 IPPQ9Y573 584 aa14.58□□□□□ -0.08
SEC16A-208ENST00000467838 PATJQ8NI35 1801 aa14.58□□□□□ -0.08
SEC16A-208ENST00000467838 A0A087WXM4 84 aa14.57□□□□□ -0.08
SEC16A-208ENST00000467838 ZNF839A8K0R7 811 aa14.57□□□□□ -0.08
SEC16A-208ENST00000467838 AURKAO14965 403 aa14.57□□□□□ -0.08
SEC16A-208ENST00000467838 AKAP10O43572 662 aa14.57□□□□□ -0.08
SEC16A-208ENST00000467838 HSD17B1P14061 328 aa14.57□□□□□ -0.08
SEC16A-208ENST00000467838 SMPD1P17405 629 aa14.57□□□□□ -0.08
SEC16A-208ENST00000467838 NUP107P57740 925 aa14.57□□□□□ -0.08
SEC16A-208ENST00000467838 ATP6V0D1P61421 351 aa14.57□□□□□ -0.08
SEC16A-208ENST00000467838 AFMIDQ63HM1 303 aa14.57□□□□□ -0.08
SEC16A-208ENST00000467838 LCN8Q6JVE9 175 aa14.57□□□□□ -0.08
SEC16A-208ENST00000467838 ZNF280DQ6N043 979 aa14.57□□□□□ -0.08
SEC16A-208ENST00000467838 CYP2R1Q6VVX0 501 aa14.57□□□□□ -0.08
SEC16A-208ENST00000467838 BEND5Q7L4P6 421 aa14.57□□□□□ -0.08
SEC16A-208ENST00000467838 EPHX4Q8IUS5 362 aa14.57□□□□□ -0.08
SEC16A-208ENST00000467838 RBM12BQ8IXT5 1001 aaKnown RBP14.57□□□□□ -0.08
SEC16A-208ENST00000467838 TMEM86AQ8N2M4 240 aa14.57□□□□□ -0.08
SEC16A-208ENST00000467838 BBS5Q8N3I7 341 aa14.57□□□□□ -0.08
SEC16A-208ENST00000467838 LZTR1Q8N653 840 aa14.57□□□□□ -0.08
SEC16A-208ENST00000467838 FAM47BQ8NA70 645 aa14.57□□□□□ -0.08
SEC16A-208ENST00000467838 MIPOL1Q8TD10 442 aa14.57□□□□□ -0.08
SEC16A-208ENST00000467838 CALML6Q8TD86 181 aa14.57□□□□□ -0.08
SEC16A-208ENST00000467838 PCED1BQ96HM7 432 aa14.57□□□□□ -0.08
SEC16A-208ENST00000467838 SLC45A3Q96JT2 553 aa14.57□□□□□ -0.08
SEC16A-208ENST00000467838 MRGPRX2Q96LB1 330 aa14.57□□□□□ -0.08
SEC16A-208ENST00000467838 CYP2S1Q96SQ9 504 aa14.57□□□□□ -0.08
SEC16A-208ENST00000467838 TRIM15Q9C019 465 aa14.57□□□□□ -0.08
SEC16A-208ENST00000467838 ARNT2Q9HBZ2 717 aa14.57□□□□□ -0.08
SEC16A-208ENST00000467838 CSNK1G1Q9HCP0 422 aa14.57□□□□□ -0.08
SEC16A-208ENST00000467838 CYP4F12Q9HCS2 524 aa14.57□□□□□ -0.08
SEC16A-208ENST00000467838 ATP13A1Q9HD20 1204 aa14.57□□□□□ -0.08
SEC16A-208ENST00000467838 AGPAT4Q9NRZ5 378 aa14.57□□□□□ -0.08
SEC16A-208ENST00000467838 TBCCD1Q9NVR7 557 aa14.57□□□□□ -0.08
SEC16A-208ENST00000467838 CHCHD3Q9NX63 227 aaKnown RBP14.57□□□□□ -0.08
SEC16A-208ENST00000467838 TRAF6Q9Y4K3 522 aa14.57□□□□□ -0.08
SEC16A-208ENST00000467838 DYTNA2CJ06 578 aa14.56□□□□□ -0.08
SEC16A-208ENST00000467838 UBFD1O14562 309 aaKnown RBP14.56□□□□□ -0.08
SEC16A-208ENST00000467838 FGF10O15520 208 aaPredicted RBP14.56□□□□□ -0.08
SEC16A-208ENST00000467838 PFDN1O60925 122 aa14.56□□□□□ -0.08
SEC16A-208ENST00000467838 GPC4O75487 556 aa14.56□□□□□ -0.08
SEC16A-208ENST00000467838 TIPRLO75663 272 aa14.56□□□□□ -0.08
SEC16A-208ENST00000467838 STAMBPO95630 424 aa14.56□□□□□ -0.08
SEC16A-208ENST00000467838 HLA-DQB2P05538 268 aa14.56□□□□□ -0.08
SEC16A-208ENST00000467838 IMPDH2P12268 514 aa14.56□□□□□ -0.08
SEC16A-208ENST00000467838 IMPDH1P20839 514 aa14.56□□□□□ -0.08
SEC16A-208ENST00000467838 LHX1P48742 406 aa14.56□□□□□ -0.08
SEC16A-208ENST00000467838 RABGGTBP53611 331 aa14.56□□□□□ -0.08
SEC16A-208ENST00000467838 NME5P56597 212 aa14.56□□□□□ -0.08
SEC16A-208ENST00000467838 BNIP2Q12982 314 aa14.56□□□□□ -0.08
SEC16A-208ENST00000467838 UGT3A2Q3SY77 523 aa14.56□□□□□ -0.08
SEC16A-208ENST00000467838 ZBED5Q49AG3 693 aa14.56□□□□□ -0.08
SEC16A-208ENST00000467838 KLHL35Q6PF15 583 aa14.56□□□□□ -0.08
SEC16A-208ENST00000467838 RETREG3Q86VR2 466 aa14.56□□□□□ -0.08
SEC16A-208ENST00000467838 PCYOX1LQ8NBM8 494 aa14.56□□□□□ -0.08
SEC16A-208ENST00000467838 OR9I1Q8NGQ6 314 aa14.56□□□□□ -0.08
SEC16A-208ENST00000467838 CANT1Q8WVQ1 401 aa14.56□□□□□ -0.08
SEC16A-208ENST00000467838 MS4A4AQ96JQ5 239 aa14.56□□□□□ -0.08
SEC16A-208ENST00000467838 HOPXQ9BPY8 73 aaPredicted RBP14.56□□□□□ -0.08
SEC16A-208ENST00000467838 CHST12Q9NRB3 414 aa14.56□□□□□ -0.08
SEC16A-208ENST00000467838 TBC1D13Q9NVG8 400 aa14.56□□□□□ -0.08
SEC16A-208ENST00000467838 TLL2Q9Y6L7 1015 aa14.56□□□□□ -0.08
SEC16A-208ENST00000467838 TRPM7Q96QT4 1865 aa14.56□□□□□ -0.08
SEC16A-208ENST00000467838 CCL15-CCL14A0A0B4J2E2 113 aa14.56□□□□□ -0.08
SEC16A-208ENST00000467838 DFFAO00273 331 aa14.56□□□□□ -0.08
SEC16A-208ENST00000467838 NME4O00746 187 aa14.56□□□□□ -0.08
SEC16A-208ENST00000467838 PAPSS2O95340 614 aaPredicted RBP14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms