RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 NAGAP17050 411 aa3.92□□□□□ -1.78
VPS50-209ENST00000467326 DESP17661 470 aa3.92□□□□□ -1.78
VPS50-209ENST00000467326 ABCD1P33897 745 aa3.92□□□□□ -1.78
VPS50-209ENST00000467326 LIFRP42702 1097 aa3.92□□□□□ -1.78
VPS50-209ENST00000467326 ARSFP54793 590 aa3.92□□□□□ -1.78
VPS50-209ENST00000467326 TPD52P55327 224 aaPredicted RBP3.92□□□□□ -1.78
VPS50-209ENST00000467326 VAMP2P63027 116 aa3.92□□□□□ -1.78
VPS50-209ENST00000467326 CUL4AQ13619 759 aa3.92□□□□□ -1.78
VPS50-209ENST00000467326 SLC12A1Q13621 1099 aa3.92□□□□□ -1.78
VPS50-209ENST00000467326 TRIM29Q14134 588 aa3.92□□□□□ -1.78
VPS50-209ENST00000467326 KEAP1Q14145 624 aa3.92□□□□□ -1.78
VPS50-209ENST00000467326 EFR3AQ14156 821 aa3.92□□□□□ -1.78
VPS50-209ENST00000467326 KRT32Q14532 448 aa3.92□□□□□ -1.78
VPS50-209ENST00000467326 HLFQ16534 295 aa3.92□□□□□ -1.78
VPS50-209ENST00000467326 TDRD12Q587J7 1177 aaKnown RBP3.92□□□□□ -1.78
VPS50-209ENST00000467326 FAM83HQ6ZRV2 1179 aaPredicted RBP3.92□□□□□ -1.78
VPS50-209ENST00000467326 BTN2A1Q7KYR7 527 aa3.92□□□□□ -1.78
VPS50-209ENST00000467326 MON1BQ7L1V2 547 aa3.92□□□□□ -1.78
VPS50-209ENST00000467326 CCDC91Q7Z6B0 441 aa3.92□□□□□ -1.78
VPS50-209ENST00000467326 FJX1Q86VR8 437 aa3.92□□□□□ -1.78
VPS50-209ENST00000467326 HEATR4Q86WZ0 1026 aa3.92□□□□□ -1.78
VPS50-209ENST00000467326 RBFAQ8N0V3 343 aa3.92□□□□□ -1.78
VPS50-209ENST00000467326 TCP11L2Q8N4U5 519 aa3.92□□□□□ -1.78
VPS50-209ENST00000467326 TEX45Q8NA69 505 aa3.92□□□□□ -1.78
VPS50-209ENST00000467326 RFFLQ8WZ73 363 aa3.92□□□□□ -1.78
VPS50-209ENST00000467326 N4BP2L2Q92802 583 aaPredicted RBP3.92□□□□□ -1.78
VPS50-209ENST00000467326 MAELQ96JY0 434 aaKnown RBP3.92□□□□□ -1.78
VPS50-209ENST00000467326 CNDP2Q96KP4 475 aaKnown RBP3.92□□□□□ -1.78
VPS50-209ENST00000467326 CTAGE1Q96RT6 745 aa3.92□□□□□ -1.78
VPS50-209ENST00000467326 SLF1Q9BQI6 1058 aa3.92□□□□□ -1.78
VPS50-209ENST00000467326 TM6SF1Q9BZW5 370 aa3.92□□□□□ -1.78
VPS50-209ENST00000467326 SLCO5A1Q9H2Y9 848 aa3.92□□□□□ -1.78
VPS50-209ENST00000467326 MROH8Q9H579 483 aa3.92□□□□□ -1.78
VPS50-209ENST00000467326 PREBQ9HCU5 417 aa3.92□□□□□ -1.78
VPS50-209ENST00000467326 KRT84Q9NSB2 600 aa3.92□□□□□ -1.78
VPS50-209ENST00000467326 HAUS2Q9NVX0 235 aa3.92□□□□□ -1.78
VPS50-209ENST00000467326 PA2G4Q9UQ80 394 aaKnown RBP3.92□□□□□ -1.78
VPS50-209ENST00000467326 A0A1W2PPH5 198 aa3.91□□□□□ -1.78
VPS50-209ENST00000467326 CLEC18AA5D8T8 446 aa3.91□□□□□ -1.78
VPS50-209ENST00000467326 ITM2AO43736 263 aa3.91□□□□□ -1.78
VPS50-209ENST00000467326 AHCYL1O43865 530 aa3.91□□□□□ -1.78
VPS50-209ENST00000467326 TSPAN3O60637 253 aa3.91□□□□□ -1.78
VPS50-209ENST00000467326 PAPSS2O95340 614 aaPredicted RBP3.91□□□□□ -1.78
VPS50-209ENST00000467326 HSPA4LO95757 839 aa3.91□□□□□ -1.78
VPS50-209ENST00000467326 IGHDP01880 384 aa3.91□□□□□ -1.78
VPS50-209ENST00000467326 CHRM4P08173 479 aa3.91□□□□□ -1.78
VPS50-209ENST00000467326 FGF3P11487 239 aaPredicted RBP3.91□□□□□ -1.78
VPS50-209ENST00000467326 CHMP24386 653 aa3.91□□□□□ -1.78
VPS50-209ENST00000467326 C21orf33P30042 268 aaPredicted RBP3.91□□□□□ -1.78
VPS50-209ENST00000467326 TNNT3P45378 269 aaPredicted RBP3.91□□□□□ -1.78
VPS50-209ENST00000467326 AMTP48728 403 aa3.91□□□□□ -1.78
VPS50-209ENST00000467326 DSCR9P59020 149 aa3.91□□□□□ -1.78
VPS50-209ENST00000467326 SLC18A2Q05940 514 aa3.91□□□□□ -1.78
VPS50-209ENST00000467326 FAM27E3Q08E93 113 aa3.91□□□□□ -1.78
VPS50-209ENST00000467326 SLC18A3Q16572 532 aa3.91□□□□□ -1.78
VPS50-209ENST00000467326 FBXO43Q4G163 708 aa3.91□□□□□ -1.78
VPS50-209ENST00000467326 PRAMEF19Q5SWL8 479 aa3.91□□□□□ -1.78
VPS50-209ENST00000467326 HAUS3Q68CZ6 603 aa3.91□□□□□ -1.78
VPS50-209ENST00000467326 NADSYN1Q6IA69 706 aa3.91□□□□□ -1.78
VPS50-209ENST00000467326 CATSPER4Q7RTX7 472 aa3.91□□□□□ -1.78
VPS50-209ENST00000467326 GALNTL5Q7Z4T8 443 aa3.91□□□□□ -1.78
VPS50-209ENST00000467326 DENND6AQ8IWF6 608 aa3.91□□□□□ -1.78
VPS50-209ENST00000467326 TRIML1Q8N9V2 468 aa3.91□□□□□ -1.78
VPS50-209ENST00000467326 CLEC18CQ8NCF0 446 aa3.91□□□□□ -1.78
VPS50-209ENST00000467326 RASSF8Q8NHQ8 419 aa3.91□□□□□ -1.78
VPS50-209ENST00000467326 GPT2Q8TD30 523 aa3.91□□□□□ -1.78
VPS50-209ENST00000467326 MGARPQ8TDB4 240 aa3.91□□□□□ -1.78
VPS50-209ENST00000467326 FAM216AQ8WUB2 273 aa3.91□□□□□ -1.78
VPS50-209ENST00000467326 NUDCD2Q8WVJ2 157 aa3.91□□□□□ -1.78
VPS50-209ENST00000467326 RAB40AQ8WXH6 277 aa3.91□□□□□ -1.78
VPS50-209ENST00000467326 HSPH1Q92598 858 aa3.91□□□□□ -1.78
VPS50-209ENST00000467326 RNF183Q96D59 192 aa3.91□□□□□ -1.78
VPS50-209ENST00000467326 NCAPGQ9BPX3 1015 aa3.91□□□□□ -1.78
VPS50-209ENST00000467326 EPHX3Q9H6B9 360 aa3.91□□□□□ -1.78
VPS50-209ENST00000467326 MVB12BQ9H7P6 319 aa3.91□□□□□ -1.78
VPS50-209ENST00000467326 GRPEL1Q9HAV7 217 aa3.91□□□□□ -1.78
VPS50-209ENST00000467326 GGA3Q9NZ52 723 aa3.91□□□□□ -1.78
VPS50-209ENST00000467326 XPO7Q9UIA9 1087 aaKnown RBP3.91□□□□□ -1.78
VPS50-209ENST00000467326 RASAL2Q9UJF2 1139 aa3.91□□□□□ -1.78
VPS50-209ENST00000467326 PROCRQ9UNN8 238 aa3.91□□□□□ -1.78
VPS50-209ENST00000467326 SOS1Q07889 1333 aaPredicted RBP3.91□□□□□ -1.78
VPS50-209ENST00000467326 IGHV4-28A0A0C4DH34 117 aa3.9□□□□□ -1.79
VPS50-209ENST00000467326 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.9□□□□□ -1.79
VPS50-209ENST00000467326 LINC01553A4QN01 128 aa3.9□□□□□ -1.79
VPS50-209ENST00000467326 FAM90A7PA6NKC0 464 aa3.9□□□□□ -1.79
VPS50-209ENST00000467326 FAM90A22PA8MWA6 464 aa3.9□□□□□ -1.79
VPS50-209ENST00000467326 FAM90A12PA8MX19 464 aa3.9□□□□□ -1.79
VPS50-209ENST00000467326 FAM90A23PA8MXZ1 464 aa3.9□□□□□ -1.79
VPS50-209ENST00000467326 MPHOSPH10O00566 681 aaKnown RBP3.9□□□□□ -1.79
VPS50-209ENST00000467326 PER2O15055 1255 aa3.9□□□□□ -1.79
VPS50-209ENST00000467326 SLC25A17O43808 307 aa3.9□□□□□ -1.79
VPS50-209ENST00000467326 KCNJ13O60928 360 aa3.9□□□□□ -1.79
VPS50-209ENST00000467326 RTN3O95197 1032 aaPredicted RBP3.9□□□□□ -1.79
VPS50-209ENST00000467326 GLUD1P00367 558 aa3.9□□□□□ -1.79
VPS50-209ENST00000467326 FCGR1AP12314 374 aa3.9□□□□□ -1.79
VPS50-209ENST00000467326 TDO2P48775 406 aa3.9□□□□□ -1.79
VPS50-209ENST00000467326 GLUD2P49448 558 aa3.9□□□□□ -1.79
VPS50-209ENST00000467326 BPIFB3P59826 476 aa3.9□□□□□ -1.79
VPS50-209ENST00000467326 TBL3Q12788 808 aaKnown RBP3.9□□□□□ -1.79
VPS50-209ENST00000467326 TRAF2Q12933 501 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms