RNA–Protein interactions for RNA: ENST00000466969.1

UBR4-210, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-210ENST00000466969 TSR1Q2NL82 804 aaKnown RBP12.67□□□□□ -0.38
UBR4-210ENST00000466969 RILPL1Q5EBL4 403 aa12.67□□□□□ -0.38
UBR4-210ENST00000466969 ARHGAP17Q68EM7 881 aa12.67□□□□□ -0.38
UBR4-210ENST00000466969 XKRXQ6PP77 449 aa12.67□□□□□ -0.38
UBR4-210ENST00000466969 SV2BQ7L1I2 683 aa12.67□□□□□ -0.38
UBR4-210ENST00000466969 SCML4Q8N228 414 aa12.67□□□□□ -0.38
UBR4-210ENST00000466969 TMC2Q8TDI7 906 aa12.67□□□□□ -0.38
UBR4-210ENST00000466969 CCDC120Q96HB5 630 aa12.67□□□□□ -0.38
UBR4-210ENST00000466969 RPRD1AQ96P16 312 aaPredicted RBP12.67□□□□□ -0.38
UBR4-210ENST00000466969 ZSCAN16Q9H4T2 348 aaPredicted RBP12.67□□□□□ -0.38
UBR4-210ENST00000466969 SEMA3GQ9NS98 782 aa12.67□□□□□ -0.38
UBR4-210ENST00000466969 ARHGEF38Q9NXL2 777 aa12.67□□□□□ -0.38
UBR4-210ENST00000466969 SLC12A6Q9UHW9 1150 aa12.67□□□□□ -0.38
UBR4-210ENST00000466969 VPS51Q9UID3 782 aa12.67□□□□□ -0.38
UBR4-210ENST00000466969 CACNB4O00305 520 aaPredicted RBP12.66□□□□□ -0.38
UBR4-210ENST00000466969 ALPPP05187 535 aa12.66□□□□□ -0.38
UBR4-210ENST00000466969 CCNB1P14635 433 aa12.66□□□□□ -0.38
UBR4-210ENST00000466969 LPOP22079 712 aaPredicted RBP12.66□□□□□ -0.38
UBR4-210ENST00000466969 GJB2P29033 226 aa12.66□□□□□ -0.38
UBR4-210ENST00000466969 CCNHP51946 323 aaPredicted RBP12.66□□□□□ -0.38
UBR4-210ENST00000466969 PTK2Q05397 1052 aa12.66□□□□□ -0.38
UBR4-210ENST00000466969 IL10RAQ13651 578 aa12.66□□□□□ -0.38
UBR4-210ENST00000466969 KYNUQ16719 465 aa12.66□□□□□ -0.38
UBR4-210ENST00000466969 GOLGA7BQ2TAP0 167 aa12.66□□□□□ -0.38
UBR4-210ENST00000466969 WSCD2Q2TBF2 565 aa12.66□□□□□ -0.38
UBR4-210ENST00000466969 ANO6Q4KMQ2 910 aa12.66□□□□□ -0.38
UBR4-210ENST00000466969 ZNF805Q5CZA5 627 aa12.66□□□□□ -0.38
UBR4-210ENST00000466969 CARD16Q5EG05 197 aa12.66□□□□□ -0.38
UBR4-210ENST00000466969 WDR74Q6RFH5 385 aaPredicted RBP12.66□□□□□ -0.38
UBR4-210ENST00000466969 TTC7BQ86TV6 843 aa12.66□□□□□ -0.38
UBR4-210ENST00000466969 ATP6V0D2Q8N8Y2 350 aa12.66□□□□□ -0.38
UBR4-210ENST00000466969 DQX1Q8TE96 717 aaKnown RBP12.66□□□□□ -0.38
UBR4-210ENST00000466969 PARD3BQ8TEW8 1205 aa12.66□□□□□ -0.38
UBR4-210ENST00000466969 PATE1Q8WXA2 126 aa12.66□□□□□ -0.38
UBR4-210ENST00000466969 IRGQQ8WZA9 623 aa12.66□□□□□ -0.38
UBR4-210ENST00000466969 TM9SF4Q92544 642 aa12.66□□□□□ -0.38
UBR4-210ENST00000466969 INPP5DQ92835 1189 aa12.66□□□□□ -0.38
UBR4-210ENST00000466969 SLC38A3Q99624 504 aa12.66□□□□□ -0.38
UBR4-210ENST00000466969 SPOCK3Q9BQ16 436 aa12.66□□□□□ -0.38
UBR4-210ENST00000466969 WRAP53Q9BUR4 548 aaKnown RBP12.66□□□□□ -0.38
UBR4-210ENST00000466969 GSDMCQ9BYG8 508 aa12.66□□□□□ -0.38
UBR4-210ENST00000466969 FGF22Q9HCT0 170 aa12.66□□□□□ -0.38
UBR4-210ENST00000466969 TAAR2Q9P1P5 351 aa12.66□□□□□ -0.38
UBR4-210ENST00000466969 HESX1Q9UBX0 185 aa12.66□□□□□ -0.38
UBR4-210ENST00000466969 KLHL3Q9UH77 587 aa12.66□□□□□ -0.38
UBR4-210ENST00000466969 TMEM202A6NGA9 273 aa12.65□□□□□ -0.38
UBR4-210ENST00000466969 RASA4BC9J798 803 aa12.65□□□□□ -0.38
UBR4-210ENST00000466969 C19orf84I3L1E1 186 aa12.65□□□□□ -0.38
UBR4-210ENST00000466969 AREL1O15033 823 aa12.65□□□□□ -0.38
UBR4-210ENST00000466969 RASA4O43374 803 aa12.65□□□□□ -0.38
UBR4-210ENST00000466969 EPB41L2O43491 1005 aaKnown RBP12.65□□□□□ -0.38
UBR4-210ENST00000466969 WIPF1O43516 503 aa12.65□□□□□ -0.38
UBR4-210ENST00000466969 EXOC3O60645 756 aa12.65□□□□□ -0.38
UBR4-210ENST00000466969 PCCBP05166 539 aa12.65□□□□□ -0.38
UBR4-210ENST00000466969 PLEKP08567 350 aaPredicted RBP12.65□□□□□ -0.38
UBR4-210ENST00000466969 DNAJA1P31689 397 aaKnown RBP12.65□□□□□ -0.38
UBR4-210ENST00000466969 RRADP55042 308 aa12.65□□□□□ -0.38
UBR4-210ENST00000466969 BST2Q10589 180 aaKnown RBP12.65□□□□□ -0.38
UBR4-210ENST00000466969 ILF3Q12906 894 aaKnown RBP eCLIP12.65□□□□□ -0.38
UBR4-210ENST00000466969 PEX6Q13608 980 aa12.65□□□□□ -0.38
UBR4-210ENST00000466969 ZACNQ401N2 412 aa12.65□□□□□ -0.38
UBR4-210ENST00000466969 DCAF10Q5QP82 559 aa12.65□□□□□ -0.38
UBR4-210ENST00000466969 MED25Q71SY5 747 aa12.65□□□□□ -0.38
UBR4-210ENST00000466969 ZNF765Q7L2R6 523 aa12.65□□□□□ -0.38
UBR4-210ENST00000466969 NAGSQ8N159 534 aa12.65□□□□□ -0.38
UBR4-210ENST00000466969 ZADH2Q8N4Q0 377 aa12.65□□□□□ -0.38
UBR4-210ENST00000466969 PCDH20Q8N6Y1 951 aaKnown RBP12.65□□□□□ -0.38
UBR4-210ENST00000466969 TMEM102Q8N9M5 508 aaPredicted RBP12.65□□□□□ -0.38
UBR4-210ENST00000466969 FAM184AQ8NB25 1140 aa12.65□□□□□ -0.38
UBR4-210ENST00000466969 PLEKHO2Q8TD55 490 aa12.65□□□□□ -0.38
UBR4-210ENST00000466969 GRHL3Q8TE85 626 aa12.65□□□□□ -0.38
UBR4-210ENST00000466969 FAR1Q8WVX9 515 aa12.65□□□□□ -0.38
UBR4-210ENST00000466969 NCSTNQ92542 709 aa12.65□□□□□ -0.38
UBR4-210ENST00000466969 TRAPPC9Q96Q05 1148 aa12.65□□□□□ -0.38
UBR4-210ENST00000466969 RUFY1Q96T51 708 aa12.65□□□□□ -0.38
UBR4-210ENST00000466969 BRD8Q9H0E9 1235 aa12.65□□□□□ -0.38
UBR4-210ENST00000466969 FGF21Q9NSA1 209 aa12.65□□□□□ -0.38
UBR4-210ENST00000466969 SIDT1Q9NXL6 827 aaKnown RBP12.65□□□□□ -0.38
UBR4-210ENST00000466969 STK17AQ9UEE5 414 aa12.65□□□□□ -0.38
UBR4-210ENST00000466969 TNFRSF10CO14798 259 aa12.64□□□□□ -0.39
UBR4-210ENST00000466969 TRIM49P0CI25 452 aa12.64□□□□□ -0.39
UBR4-210ENST00000466969 TRIM49CP0CI26 452 aa12.64□□□□□ -0.39
UBR4-210ENST00000466969 LONP1P36776 959 aaKnown RBP12.64□□□□□ -0.39
UBR4-210ENST00000466969 KIR3DL1P43629 444 aa12.64□□□□□ -0.39
UBR4-210ENST00000466969 SNRPFP62306 86 aaKnown RBP12.64□□□□□ -0.39
UBR4-210ENST00000466969 CLDN10P78369 228 aa12.64□□□□□ -0.39
UBR4-210ENST00000466969 MTM1Q13496 603 aa12.64□□□□□ -0.39
UBR4-210ENST00000466969 IL11RAQ14626 422 aa12.64□□□□□ -0.39
UBR4-210ENST00000466969 LLGL1Q15334 1064 aa12.64□□□□□ -0.39
UBR4-210ENST00000466969 ZC3H12AQ5D1E8 599 aaKnown RBP12.64□□□□□ -0.39
UBR4-210ENST00000466969 CUZD1Q86UP6 607 aa12.64□□□□□ -0.39
UBR4-210ENST00000466969 CCDC65Q8IXS2 484 aa12.64□□□□□ -0.39
UBR4-210ENST00000466969 RYBPQ8N488 228 aaPredicted RBP12.64□□□□□ -0.39
UBR4-210ENST00000466969 NINJ1Q92982 152 aa12.64□□□□□ -0.39
UBR4-210ENST00000466969 MTFMTQ96DP5 389 aaKnown RBP12.64□□□□□ -0.39
UBR4-210ENST00000466969 ELMO2Q96JJ3 720 aa12.64□□□□□ -0.39
UBR4-210ENST00000466969 PSMB7Q99436 277 aa12.64□□□□□ -0.39
UBR4-210ENST00000466969 SMR3AQ99954 134 aa12.64□□□□□ -0.39
UBR4-210ENST00000466969 CEP44Q9C0F1 390 aa12.64□□□□□ -0.39
UBR4-210ENST00000466969 NIF3L1Q9GZT8 377 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms