RNA–Protein interactions for RNA: ENST00000466780.5

PDZRN3-205, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-205ENST00000466780 PACRGLQ8N7B6 248 aa13.05□□□□□ -0.32
PDZRN3-205ENST00000466780 PPHLN1Q8NEY8 458 aaKnown RBP13.05□□□□□ -0.32
PDZRN3-205ENST00000466780 MED10Q9BTT4 135 aa13.05□□□□□ -0.32
PDZRN3-205ENST00000466780 TKTL2Q9H0I9 626 aa13.05□□□□□ -0.32
PDZRN3-205ENST00000466780 HIPK3Q9H422 1215 aa13.05□□□□□ -0.32
PDZRN3-205ENST00000466780 IL1RL2Q9HB29 575 aa13.05□□□□□ -0.32
PDZRN3-205ENST00000466780 MRM3Q9HC36 420 aaKnown RBP13.05□□□□□ -0.32
PDZRN3-205ENST00000466780 AGPAT4Q9NRZ5 378 aa13.05□□□□□ -0.32
PDZRN3-205ENST00000466780 HACD3Q9P035 362 aa13.05□□□□□ -0.32
PDZRN3-205ENST00000466780 MTF2Q9Y483 593 aaPredicted RBP13.05□□□□□ -0.32
PDZRN3-205ENST00000466780 BOLA2-SMG1P6H3BVE0 249 aa13.05□□□□□ -0.32
PDZRN3-205ENST00000466780 SEC24DO94855 1032 aaPredicted RBP13.05□□□□□ -0.32
PDZRN3-205ENST00000466780 CLIC3O95833 236 aa13.05□□□□□ -0.32
PDZRN3-205ENST00000466780 TFPTP0C1Z6 253 aa13.05□□□□□ -0.32
PDZRN3-205ENST00000466780 VARSP26640 1264 aaKnown RBP13.05□□□□□ -0.32
PDZRN3-205ENST00000466780 ETFBP38117 255 aa13.05□□□□□ -0.32
PDZRN3-205ENST00000466780 ACADVLP49748 655 aa13.05□□□□□ -0.32
PDZRN3-205ENST00000466780 SLC5A3P53794 718 aa13.05□□□□□ -0.32
PDZRN3-205ENST00000466780 SLC12A2P55011 1212 aa13.05□□□□□ -0.32
PDZRN3-205ENST00000466780 MERTKQ12866 999 aa13.05□□□□□ -0.32
PDZRN3-205ENST00000466780 SLC36A3Q495N2 470 aa13.05□□□□□ -0.32
PDZRN3-205ENST00000466780 CAMK1DQ8IU85 385 aa13.05□□□□□ -0.32
PDZRN3-205ENST00000466780 AFAP1L2Q8N4X5 818 aa13.05□□□□□ -0.32
PDZRN3-205ENST00000466780 PPTC7Q8NI37 304 aa13.05□□□□□ -0.32
PDZRN3-205ENST00000466780 ANKRD49Q8WVL7 239 aa13.05□□□□□ -0.32
PDZRN3-205ENST00000466780 EDEM1Q92611 657 aa13.05□□□□□ -0.32
PDZRN3-205ENST00000466780 ZUFSPQ96AP4 578 aa13.05□□□□□ -0.32
PDZRN3-205ENST00000466780 PGAP3Q96FM1 320 aaPredicted RBP13.05□□□□□ -0.32
PDZRN3-205ENST00000466780 RHOBTB2Q9BYZ6 727 aa13.05□□□□□ -0.32
PDZRN3-205ENST00000466780 FAM49AQ9H0Q0 323 aaPredicted RBP13.05□□□□□ -0.32
PDZRN3-205ENST00000466780 RPF2Q9H7B2 306 aaKnown RBP13.05□□□□□ -0.32
PDZRN3-205ENST00000466780 AAR2Q9Y312 384 aaKnown RBP13.05□□□□□ -0.32
PDZRN3-205ENST00000466780 TPST1O60507 370 aa13.04□□□□□ -0.32
PDZRN3-205ENST00000466780 USP17L7P0C7H9 530 aa13.04□□□□□ -0.32
PDZRN3-205ENST00000466780 ADRA1AP35348 466 aa13.04□□□□□ -0.32
PDZRN3-205ENST00000466780 PNPLA4P41247 253 aa13.04□□□□□ -0.32
PDZRN3-205ENST00000466780 PMS2P3Q13401 168 aa13.04□□□□□ -0.32
PDZRN3-205ENST00000466780 FAM83EQ2M2I3 478 aa13.04□□□□□ -0.32
PDZRN3-205ENST00000466780 ARL13BQ3SXY8 428 aa13.04□□□□□ -0.32
PDZRN3-205ENST00000466780 WSCD1Q658N2 575 aa13.04□□□□□ -0.32
PDZRN3-205ENST00000466780 NOTUMQ6P988 496 aa13.04□□□□□ -0.32
PDZRN3-205ENST00000466780 ZMIZ2Q8NF64 920 aa13.04□□□□□ -0.32
PDZRN3-205ENST00000466780 TNIP2Q8NFZ5 429 aa13.04□□□□□ -0.32
PDZRN3-205ENST00000466780 PPP1R13LQ8WUF5 828 aa13.04□□□□□ -0.32
PDZRN3-205ENST00000466780 ROPN1LQ96C74 230 aa13.04□□□□□ -0.32
PDZRN3-205ENST00000466780 FBXL20Q96IG2 436 aa13.04□□□□□ -0.32
PDZRN3-205ENST00000466780 FCRL5Q96RD9 977 aa13.04□□□□□ -0.32
PDZRN3-205ENST00000466780 OSMRQ99650 979 aa13.04□□□□□ -0.32
PDZRN3-205ENST00000466780 ATXN3LQ9H3M9 355 aa13.04□□□□□ -0.32
PDZRN3-205ENST00000466780 CXorf21Q9HAI6 301 aa13.04□□□□□ -0.32
PDZRN3-205ENST00000466780 ABCD2Q9UBJ2 740 aa13.04□□□□□ -0.32
PDZRN3-205ENST00000466780 EGFL7Q9UHF1 273 aa13.04□□□□□ -0.32
PDZRN3-205ENST00000466780 DHRS12A0PJE2 317 aa13.04□□□□□ -0.32
PDZRN3-205ENST00000466780 H3BMQ9 156 aa13.04□□□□□ -0.32
PDZRN3-205ENST00000466780 LTA4HP09960 611 aaKnown RBP13.04□□□□□ -0.32
PDZRN3-205ENST00000466780 OXTRP30559 389 aa13.04□□□□□ -0.32
PDZRN3-205ENST00000466780 MAGEA8P43361 318 aa13.04□□□□□ -0.32
PDZRN3-205ENST00000466780 KCNC1P48547 511 aa13.04□□□□□ -0.32
PDZRN3-205ENST00000466780 ATP4BP51164 291 aa13.04□□□□□ -0.32
PDZRN3-205ENST00000466780 CCNA1P78396 465 aa13.04□□□□□ -0.32
PDZRN3-205ENST00000466780 MAP7D1Q3KQU3 841 aa13.04□□□□□ -0.32
PDZRN3-205ENST00000466780 SV2CQ496J9 727 aa13.04□□□□□ -0.32
PDZRN3-205ENST00000466780 NEPROQ6NW34 567 aa13.04□□□□□ -0.32
PDZRN3-205ENST00000466780 BHLHA9Q7RTU4 235 aa13.04□□□□□ -0.32
PDZRN3-205ENST00000466780 KDELC2Q7Z4H8 507 aa13.04□□□□□ -0.32
PDZRN3-205ENST00000466780 ANKRD23Q86SG2 305 aa13.04□□□□□ -0.32
PDZRN3-205ENST00000466780 SLC15A3Q8IY34 581 aa13.04□□□□□ -0.32
PDZRN3-205ENST00000466780 CMTR2Q8IYT2 770 aaKnown RBP13.04□□□□□ -0.32
PDZRN3-205ENST00000466780 GIPC3Q8TF64 312 aa13.04□□□□□ -0.32
PDZRN3-205ENST00000466780 CCDC126Q96EE4 140 aa13.04□□□□□ -0.32
PDZRN3-205ENST00000466780 COG8Q96MW5 612 aa13.04□□□□□ -0.32
PDZRN3-205ENST00000466780 SMOQ99835 787 aa13.04□□□□□ -0.32
PDZRN3-205ENST00000466780 WDCPQ9H6R7 721 aa13.04□□□□□ -0.32
PDZRN3-205ENST00000466780 GLOD4Q9HC38 313 aa13.04□□□□□ -0.32
PDZRN3-205ENST00000466780 CRTAC1Q9NQ79 661 aa13.04□□□□□ -0.32
PDZRN3-205ENST00000466780 GIMAP2Q9UG22 337 aa13.04□□□□□ -0.32
PDZRN3-205ENST00000466780 CLEC11AQ9Y240 323 aa13.04□□□□□ -0.32
PDZRN3-205ENST00000466780 AQP12BA6NM10 295 aa13.04□□□□□ -0.32
PDZRN3-205ENST00000466780 FXYD1O00168 92 aa13.04□□□□□ -0.32
PDZRN3-205ENST00000466780 DFFAO00273 331 aa13.04□□□□□ -0.32
PDZRN3-205ENST00000466780 ACOX3O15254 700 aa13.04□□□□□ -0.32
PDZRN3-205ENST00000466780 GPR32O75388 356 aa13.04□□□□□ -0.32
PDZRN3-205ENST00000466780 STAMBPO95630 424 aa13.04□□□□□ -0.32
PDZRN3-205ENST00000466780 CD247P20963 164 aa13.04□□□□□ -0.32
PDZRN3-205ENST00000466780 CXCR3P49682 368 aa13.04□□□□□ -0.32
PDZRN3-205ENST00000466780 NAA20P61599 178 aa13.04□□□□□ -0.32
PDZRN3-205ENST00000466780 GALNT1Q10472 559 aaPredicted RBP13.04□□□□□ -0.32
PDZRN3-205ENST00000466780 ATP6AP1Q15904 470 aa13.04□□□□□ -0.32
PDZRN3-205ENST00000466780 UGT3A2Q3SY77 523 aa13.04□□□□□ -0.32
PDZRN3-205ENST00000466780 NOMO2Q5JPE7 1267 aa13.04□□□□□ -0.32
PDZRN3-205ENST00000466780 AGAP9Q5VTM2 703 aa13.04□□□□□ -0.32
PDZRN3-205ENST00000466780 PM20D1Q6GTS8 502 aa13.04□□□□□ -0.32
PDZRN3-205ENST00000466780 KIAA0930Q6ICG6 404 aaPredicted RBP13.04□□□□□ -0.32
PDZRN3-205ENST00000466780 AQP12AQ8IXF9 295 aa13.04□□□□□ -0.32
PDZRN3-205ENST00000466780 TOP6BLQ8N6T0 577 aa13.04□□□□□ -0.32
PDZRN3-205ENST00000466780 NAA50Q9GZZ1 169 aaKnown RBP13.04□□□□□ -0.32
PDZRN3-205ENST00000466780 NEU3Q9UQ49 428 aa13.04□□□□□ -0.32
PDZRN3-205ENST00000466780 SH3GLB1Q9Y371 365 aa13.04□□□□□ -0.32
PDZRN3-205ENST00000466780 A0A0J9YYE9 177 aa13.03□□□□□ -0.32
PDZRN3-205ENST00000466780 A0A1W2PPW3 197 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms