RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 FBXL6Q8N531 539 aa11.2□□□□□ -0.62
VCP-204ENST00000466100 ZCCHC9Q8N567 271 aaKnown RBP11.2□□□□□ -0.62
VCP-204ENST00000466100 SLC25A41Q8N5S1 370 aa11.2□□□□□ -0.62
VCP-204ENST00000466100 HMGB4Q8WW32 186 aa11.2□□□□□ -0.62
VCP-204ENST00000466100 PWWP2AQ96N64 755 aa11.2□□□□□ -0.62
VCP-204ENST00000466100 WDR83Q9BRX9 315 aaKnown RBP11.2□□□□□ -0.62
VCP-204ENST00000466100 ADGRE3Q9BY15 652 aa11.2□□□□□ -0.62
VCP-204ENST00000466100 XAB2Q9HCS7 855 aaKnown RBP11.2□□□□□ -0.62
VCP-204ENST00000466100 PCDH12Q9NPG4 1184 aa11.2□□□□□ -0.62
VCP-204ENST00000466100 PIH1D1Q9NWS0 290 aaKnown RBP11.2□□□□□ -0.62
VCP-204ENST00000466100 EBF1Q9UH73 591 aa11.2□□□□□ -0.62
VCP-204ENST00000466100 FZD4Q9ULV1 537 aa11.2□□□□□ -0.62
VCP-204ENST00000466100 SPO11Q9Y5K1 396 aa11.2□□□□□ -0.62
VCP-204ENST00000466100 TNRC6BQ9UPQ9 1833 aaKnown RBP11.19□□□□□ -0.62
VCP-204ENST00000466100 A0A1W2PP55 124 aa11.19□□□□□ -0.62
VCP-204ENST00000466100 NPIPB15A6NHN6 443 aaPredicted RBP11.19□□□□□ -0.62
VCP-204ENST00000466100 CTIFO43310 598 aaKnown RBP11.19□□□□□ -0.62
VCP-204ENST00000466100 AP1G1O43747 822 aa11.19□□□□□ -0.62
VCP-204ENST00000466100 PPFIA2O75334 1257 aa11.19□□□□□ -0.62
VCP-204ENST00000466100 AVILO75366 819 aa11.19□□□□□ -0.62
VCP-204ENST00000466100 DNTTP04053 509 aa11.19□□□□□ -0.62
VCP-204ENST00000466100 ALPIP09923 528 aa11.19□□□□□ -0.62
VCP-204ENST00000466100 MYBL2P10244 700 aa11.19□□□□□ -0.62
VCP-204ENST00000466100 CTPS1P17812 591 aa11.19□□□□□ -0.62
VCP-204ENST00000466100 LHCGRP22888 699 aa11.19□□□□□ -0.62
VCP-204ENST00000466100 HOXA6P31267 233 aa11.19□□□□□ -0.62
VCP-204ENST00000466100 HNF1BP35680 557 aa11.19□□□□□ -0.62
VCP-204ENST00000466100 CXCL12P48061 93 aa11.19□□□□□ -0.62
VCP-204ENST00000466100 TPMTP51580 245 aa11.19□□□□□ -0.62
VCP-204ENST00000466100 SUOXP51687 545 aa11.19□□□□□ -0.62
VCP-204ENST00000466100 PLTPP55058 493 aa11.19□□□□□ -0.62
VCP-204ENST00000466100 POLR2LP62875 67 aaKnown RBP11.19□□□□□ -0.62
VCP-204ENST00000466100 RALGDSQ12967 914 aa11.19□□□□□ -0.62
VCP-204ENST00000466100 TTC31Q49AM3 519 aaPredicted RBP11.19□□□□□ -0.62
VCP-204ENST00000466100 FNBP1LQ5T0N5 605 aa11.19□□□□□ -0.62
VCP-204ENST00000466100 ANO7Q6IWH7 933 aa11.19□□□□□ -0.62
VCP-204ENST00000466100 KIAA1324Q6UXG2 1013 aaKnown RBP11.19□□□□□ -0.62
VCP-204ENST00000466100 PPP1R21Q6ZMI0 780 aa11.19□□□□□ -0.62
VCP-204ENST00000466100 DPPA4Q7L190 304 aa11.19□□□□□ -0.62
VCP-204ENST00000466100 IFT20Q8IY31 132 aa11.19□□□□□ -0.62
VCP-204ENST00000466100 MAML2Q8IZL2 1156 aaPredicted RBP11.19□□□□□ -0.62
VCP-204ENST00000466100 ABCA7Q8IZY2 2146 aa11.19□□□□□ -0.62
VCP-204ENST00000466100 TTC30BQ8N4P2 665 aa11.19□□□□□ -0.62
VCP-204ENST00000466100 HDDC3Q8N4P3 179 aa11.19□□□□□ -0.62
VCP-204ENST00000466100 CAMKK1Q8N5S9 505 aa11.19□□□□□ -0.62
VCP-204ENST00000466100 EIF1ADQ8N9N8 165 aaKnown RBP11.19□□□□□ -0.62
VCP-204ENST00000466100 UBXN4Q92575 508 aa11.19□□□□□ -0.62
VCP-204ENST00000466100 RAB7BQ96AH8 199 aa11.19□□□□□ -0.62
VCP-204ENST00000466100 PBXIP1Q96AQ6 731 aa11.19□□□□□ -0.62
VCP-204ENST00000466100 RMDN1Q96DB5 314 aa11.19□□□□□ -0.62
VCP-204ENST00000466100 SCRN2Q96FV2 425 aa11.19□□□□□ -0.62
VCP-204ENST00000466100 FRMD8Q9BZ67 464 aaPredicted RBP11.19□□□□□ -0.62
VCP-204ENST00000466100 PHACTR1Q9C0D0 580 aa11.19□□□□□ -0.62
VCP-204ENST00000466100 FBXL12Q9NXK8 326 aa11.19□□□□□ -0.62
VCP-204ENST00000466100 B4GALT6Q9UBX8 382 aa11.19□□□□□ -0.62
VCP-204ENST00000466100 GGT7Q9UJ14 662 aa11.19□□□□□ -0.62
VCP-204ENST00000466100 ITM2BQ9Y287 266 aa11.19□□□□□ -0.62
VCP-204ENST00000466100 FADS3Q9Y5Q0 445 aa11.19□□□□□ -0.62
VCP-204ENST00000466100 SLC7A4O43246 635 aa11.18□□□□□ -0.62
VCP-204ENST00000466100 PLRG1O43660 514 aaKnown RBP11.18□□□□□ -0.62
VCP-204ENST00000466100 RNASEH2AO75792 299 aaKnown RBP11.18□□□□□ -0.62
VCP-204ENST00000466100 ALDH1A2O94788 518 aa11.18□□□□□ -0.62
VCP-204ENST00000466100 PIRTP0C851 137 aa11.18□□□□□ -0.62
VCP-204ENST00000466100 TPH1P17752 444 aa11.18□□□□□ -0.62
VCP-204ENST00000466100 VIPR1P32241 457 aa11.18□□□□□ -0.62
VCP-204ENST00000466100 EPHB1P54762 984 aa11.18□□□□□ -0.62
VCP-204ENST00000466100 ADPRHP54922 357 aa11.18□□□□□ -0.62
VCP-204ENST00000466100 VSNL1P62760 191 aa11.18□□□□□ -0.62
VCP-204ENST00000466100 SARNPP82979 210 aaKnown RBP11.18□□□□□ -0.62
VCP-204ENST00000466100 MTM1Q13496 603 aa11.18□□□□□ -0.62
VCP-204ENST00000466100 HIF1AQ16665 826 aa11.18□□□□□ -0.62
VCP-204ENST00000466100 CERCAMQ5T4B2 595 aa11.18□□□□□ -0.62
VCP-204ENST00000466100 CFAP58Q5T655 872 aa11.18□□□□□ -0.62
VCP-204ENST00000466100 WDR93Q6P2C0 686 aa11.18□□□□□ -0.62
VCP-204ENST00000466100 USP45Q70EL2 814 aa11.18□□□□□ -0.62
VCP-204ENST00000466100 TSPAN33Q86UF1 283 aa11.18□□□□□ -0.62
VCP-204ENST00000466100 KBTBD6Q86V97 674 aa11.18□□□□□ -0.62
VCP-204ENST00000466100 CBARPQ8N350 705 aaPredicted RBP11.18□□□□□ -0.62
VCP-204ENST00000466100 MPP5Q8N3R9 675 aa11.18□□□□□ -0.62
VCP-204ENST00000466100 GPR161Q8N6U8 529 aaKnown RBP11.18□□□□□ -0.62
VCP-204ENST00000466100 MYRIPQ8NFW9 859 aa11.18□□□□□ -0.62
VCP-204ENST00000466100 IFT81Q8WYA0 676 aa11.18□□□□□ -0.62
VCP-204ENST00000466100 EID2BQ96D98 161 aa11.18□□□□□ -0.62
VCP-204ENST00000466100 SIGLEC10Q96LC7 697 aa11.18□□□□□ -0.62
VCP-204ENST00000466100 RANBP9Q96S59 729 aa11.18□□□□□ -0.62
VCP-204ENST00000466100 FOXP3Q9BZS1 431 aa11.18□□□□□ -0.62
VCP-204ENST00000466100 MAGEE1Q9HCI5 957 aa11.18□□□□□ -0.62
VCP-204ENST00000466100 ITM2CQ9NQX7 267 aa11.18□□□□□ -0.62
VCP-204ENST00000466100 DYRK4Q9NR20 520 aa11.18□□□□□ -0.62
VCP-204ENST00000466100 SPATA6Q9NWH7 488 aaPredicted RBP11.18□□□□□ -0.62
VCP-204ENST00000466100 SYBUQ9NX95 663 aa11.18□□□□□ -0.62
VCP-204ENST00000466100 RAB21Q9UL25 225 aa11.18□□□□□ -0.62
VCP-204ENST00000466100 NFU1Q9UMS0 254 aa11.18□□□□□ -0.62
VCP-204ENST00000466100 ZNF711Q9Y462 761 aa11.18□□□□□ -0.62
VCP-204ENST00000466100 A0A0U1RQS6 177 aa11.17□□□□□ -0.62
VCP-204ENST00000466100 MROH6A6NGR9 719 aa11.17□□□□□ -0.62
VCP-204ENST00000466100 AP3B1O00203 1094 aa11.17□□□□□ -0.62
VCP-204ENST00000466100 AURKAO14965 403 aa11.17□□□□□ -0.62
VCP-204ENST00000466100 LDB2O43679 373 aa11.17□□□□□ -0.62
VCP-204ENST00000466100 BANF1O75531 89 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms