RNA–Protein interactions for RNA: ENST00000466017.1

VPS41-211, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-211ENST00000466017 TCEAL5Q5H9L2 206 aa5.59□□□□□ -1.51
VPS41-211ENST00000466017 RABGAP1LQ5R372 815 aa5.59□□□□□ -1.51
VPS41-211ENST00000466017 ATAT1Q5SQI0 421 aa5.59□□□□□ -1.51
VPS41-211ENST00000466017 BEND6Q5SZJ8 279 aaPredicted RBP5.59□□□□□ -1.51
VPS41-211ENST00000466017 GPR158Q5T848 1215 aa5.59□□□□□ -1.51
VPS41-211ENST00000466017 LCE4AQ5TA78 99 aa5.59□□□□□ -1.51
VPS41-211ENST00000466017 ARMC3Q5W041 872 aa5.59□□□□□ -1.51
VPS41-211ENST00000466017 CWF19L1Q69YN2 538 aaKnown RBP5.59□□□□□ -1.51
VPS41-211ENST00000466017 NADSYN1Q6IA69 706 aa5.59□□□□□ -1.51
VPS41-211ENST00000466017 EMBQ6PCB8 327 aa5.59□□□□□ -1.51
VPS41-211ENST00000466017 DARS2Q6PI48 645 aaKnown RBP5.59□□□□□ -1.51
VPS41-211ENST00000466017 GRASPQ7Z6J2 395 aaPredicted RBP5.59□□□□□ -1.51
VPS41-211ENST00000466017 HOOK3Q86VS8 718 aa5.59□□□□□ -1.51
VPS41-211ENST00000466017 MIB1Q86YT6 1006 aa5.59□□□□□ -1.51
VPS41-211ENST00000466017 TEX26Q8N6G2 289 aa5.59□□□□□ -1.51
VPS41-211ENST00000466017 CELF5Q8N6W0 485 aaKnown RBP5.59□□□□□ -1.51
VPS41-211ENST00000466017 MAB21L3Q8N8X9 362 aa5.59□□□□□ -1.51
VPS41-211ENST00000466017 GDPD5Q8WTR4 605 aa5.59□□□□□ -1.51
VPS41-211ENST00000466017 HTR3CQ8WXA8 447 aa5.59□□□□□ -1.51
VPS41-211ENST00000466017 RSAD2Q8WXG1 361 aa5.59□□□□□ -1.51
VPS41-211ENST00000466017 SMG7Q92540 1137 aaKnown RBP5.59□□□□□ -1.51
VPS41-211ENST00000466017 MAML1Q92585 1016 aa5.59□□□□□ -1.51
VPS41-211ENST00000466017 ART4Q93070 314 aa5.59□□□□□ -1.51
VPS41-211ENST00000466017 CAVIN3Q969G5 261 aa5.59□□□□□ -1.51
VPS41-211ENST00000466017 IGSF8Q969P0 613 aa5.59□□□□□ -1.51
VPS41-211ENST00000466017 TMA16Q96EY4 203 aaKnown RBP5.59□□□□□ -1.51
VPS41-211ENST00000466017 ZNF599Q96NL3 588 aa5.59□□□□□ -1.51
VPS41-211ENST00000466017 PPP1R2P1Q96PQ5 205 aa5.59□□□□□ -1.51
VPS41-211ENST00000466017 QKIQ96PU8 341 aaKnown RBP eCLIP5.59□□□□□ -1.51
VPS41-211ENST00000466017 SLC22A12Q96S37 553 aa5.59□□□□□ -1.51
VPS41-211ENST00000466017 CYP2S1Q96SQ9 504 aa5.59□□□□□ -1.51
VPS41-211ENST00000466017 IL12RB2Q99665 862 aa5.59□□□□□ -1.51
VPS41-211ENST00000466017 ACE2Q9BYF1 805 aaPredicted RBP5.59□□□□□ -1.51
VPS41-211ENST00000466017 SIK2Q9H0K1 926 aa5.59□□□□□ -1.51
VPS41-211ENST00000466017 SLC6A17Q9H1V8 727 aa5.59□□□□□ -1.51
VPS41-211ENST00000466017 PRDM12Q9H4Q4 367 aa5.59□□□□□ -1.51
VPS41-211ENST00000466017 CNTD2Q9H8S5 307 aa5.59□□□□□ -1.51
VPS41-211ENST00000466017 CERS4Q9HA82 394 aa5.59□□□□□ -1.51
VPS41-211ENST00000466017 CD320Q9NPF0 282 aa5.59□□□□□ -1.51
VPS41-211ENST00000466017 ETNK2Q9NVF9 386 aa5.59□□□□□ -1.51
VPS41-211ENST00000466017 KLHL11Q9NVR0 708 aa5.59□□□□□ -1.51
VPS41-211ENST00000466017 ARGLU1Q9NWB6 273 aaPredicted RBP5.59□□□□□ -1.51
VPS41-211ENST00000466017 IGSF9Q9P2J2 1179 aa5.59□□□□□ -1.51
VPS41-211ENST00000466017 PRKAG3Q9UGI9 489 aa5.59□□□□□ -1.51
VPS41-211ENST00000466017 XPO7Q9UIA9 1087 aaKnown RBP5.59□□□□□ -1.51
VPS41-211ENST00000466017 TMEFF2Q9UIK5 374 aaPredicted RBP5.59□□□□□ -1.51
VPS41-211ENST00000466017 MBD1Q9UIS9 605 aaPredicted RBP5.59□□□□□ -1.51
VPS41-211ENST00000466017 TRHDEQ9UKU6 1024 aa5.59□□□□□ -1.51
VPS41-211ENST00000466017 VANGL2Q9ULK5 521 aa5.59□□□□□ -1.51
VPS41-211ENST00000466017 SMG5Q9UPR3 1016 aaKnown RBP5.59□□□□□ -1.51
VPS41-211ENST00000466017 EMC9Q9Y3B6 208 aa5.59□□□□□ -1.51
VPS41-211ENST00000466017 MRPS23Q9Y3D9 190 aaKnown RBP5.59□□□□□ -1.51
VPS41-211ENST00000466017 SH3BP1Q9Y3L3 701 aa5.59□□□□□ -1.51
VPS41-211ENST00000466017 CPQQ9Y646 472 aa5.59□□□□□ -1.51
VPS41-211ENST00000466017 MTCH2Q9Y6C9 303 aa5.59□□□□□ -1.51
VPS41-211ENST00000466017 OBSL1O75147 1896 aa5.59□□□□□ -1.51
VPS41-211ENST00000466017 CHD5Q8TDI0 1954 aa5.58□□□□□ -1.52
VPS41-211ENST00000466017 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP5.58□□□□□ -1.52
VPS41-211ENST00000466017 GOLGA6L7A0A1B0GV03 622 aa5.58□□□□□ -1.52
VPS41-211ENST00000466017 A0A1B0GVM2 712 aa5.58□□□□□ -1.52
VPS41-211ENST00000466017 ANKRD34BA5PLL1 514 aa5.58□□□□□ -1.52
VPS41-211ENST00000466017 TCAF2A6NFQ2 919 aa5.58□□□□□ -1.52
VPS41-211ENST00000466017 ZSCAN5CA6NGD5 496 aaPredicted RBP5.58□□□□□ -1.52
VPS41-211ENST00000466017 ARHGAP42A6NI28 874 aa5.58□□□□□ -1.52
VPS41-211ENST00000466017 DBX1A6NMT0 343 aa5.58□□□□□ -1.52
VPS41-211ENST00000466017 NPIPB6E9PJ23 425 aa5.58□□□□□ -1.52
VPS41-211ENST00000466017 RFXAPO00287 272 aa5.58□□□□□ -1.52
VPS41-211ENST00000466017 MATN3O15232 486 aa5.58□□□□□ -1.52
VPS41-211ENST00000466017 CHADO15335 359 aa5.58□□□□□ -1.52
VPS41-211ENST00000466017 TP73O15350 636 aa5.58□□□□□ -1.52
VPS41-211ENST00000466017 EIF3HO15372 352 aaKnown RBP eCLIP5.58□□□□□ -1.52
VPS41-211ENST00000466017 MFSD11O43934 449 aa5.58□□□□□ -1.52
VPS41-211ENST00000466017 OPHN1O60890 802 aa5.58□□□□□ -1.52
VPS41-211ENST00000466017 PPFIA2O75334 1257 aa5.58□□□□□ -1.52
VPS41-211ENST00000466017 SEC31AO94979 1220 aaKnown RBP5.58□□□□□ -1.52
VPS41-211ENST00000466017 CKMP06732 381 aa5.58□□□□□ -1.52
VPS41-211ENST00000466017 RHOXF2BP0C7M4 288 aa5.58□□□□□ -1.52
VPS41-211ENST00000466017 ECHS1P30084 290 aa5.58□□□□□ -1.52
VPS41-211ENST00000466017 SLC6A4P31645 630 aa5.58□□□□□ -1.52
VPS41-211ENST00000466017 RPL22P35268 128 aaKnown RBP5.58□□□□□ -1.52
VPS41-211ENST00000466017 AVPR1AP37288 418 aa5.58□□□□□ -1.52
VPS41-211ENST00000466017 GRIA2P42262 883 aa5.58□□□□□ -1.52
VPS41-211ENST00000466017 MTHFRP42898 656 aa5.58□□□□□ -1.52
VPS41-211ENST00000466017 CARSP49589 748 aaKnown RBP5.58□□□□□ -1.52
VPS41-211ENST00000466017 VSNL1P62760 191 aa5.58□□□□□ -1.52
VPS41-211ENST00000466017 DYNLT1P63172 113 aa5.58□□□□□ -1.52
VPS41-211ENST00000466017 IFI35P80217 286 aaPredicted RBP5.58□□□□□ -1.52
VPS41-211ENST00000466017 CYP4F8P98187 520 aa5.58□□□□□ -1.52
VPS41-211ENST00000466017 POU4F1Q01851 419 aa5.58□□□□□ -1.52
VPS41-211ENST00000466017 GUCY2DQ02846 1103 aa5.58□□□□□ -1.52
VPS41-211ENST00000466017 IL10RBQ08334 325 aa5.58□□□□□ -1.52
VPS41-211ENST00000466017 ZNF177Q13360 481 aaPredicted RBP5.58□□□□□ -1.52
VPS41-211ENST00000466017 SNX1Q13596 522 aa5.58□□□□□ -1.52
VPS41-211ENST00000466017 DMC1Q14565 340 aa5.58□□□□□ -1.52
VPS41-211ENST00000466017 RFTN1Q14699 578 aaPredicted RBP5.58□□□□□ -1.52
VPS41-211ENST00000466017 MORF4L2Q15014 288 aa5.58□□□□□ -1.52
VPS41-211ENST00000466017 LLGL1Q15334 1064 aa5.58□□□□□ -1.52
VPS41-211ENST00000466017 PPP1R7Q15435 360 aa5.58□□□□□ -1.52
VPS41-211ENST00000466017 TEAD2Q15562 447 aa5.58□□□□□ -1.52
VPS41-211ENST00000466017 ZNF77Q15935 545 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms