RNA–Protein interactions for RNA: ENST00000465461.6

CUX1-207, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-207ENST00000465461 TEAD4Q15561 434 aa11.72□□□□□ -0.53
CUX1-207ENST00000465461 HLA-BQ31612 363 aa11.72□□□□□ -0.53
CUX1-207ENST00000465461 RALGPS1Q5JS13 557 aa11.72□□□□□ -0.53
CUX1-207ENST00000465461 STPG1Q5TH74 334 aa11.72□□□□□ -0.53
CUX1-207ENST00000465461 GCNT7Q6ZNI0 430 aa11.72□□□□□ -0.53
CUX1-207ENST00000465461 DPPA4Q7L190 304 aa11.72□□□□□ -0.53
CUX1-207ENST00000465461 RABEPKQ7Z6M1 372 aa11.72□□□□□ -0.53
CUX1-207ENST00000465461 TSPAN33Q86UF1 283 aa11.72□□□□□ -0.53
CUX1-207ENST00000465461 SPATS2Q86XZ4 545 aaKnown RBP11.72□□□□□ -0.53
CUX1-207ENST00000465461 SLC13A5Q86YT5 568 aaPredicted RBP11.72□□□□□ -0.53
CUX1-207ENST00000465461 SLC35F6Q8N357 371 aa11.72□□□□□ -0.53
CUX1-207ENST00000465461 C17orf53Q8N3J3 647 aaPredicted RBP11.72□□□□□ -0.53
CUX1-207ENST00000465461 MINDY1Q8N5J2 469 aa11.72□□□□□ -0.53
CUX1-207ENST00000465461 TMEM145Q8NBT3 493 aa11.72□□□□□ -0.53
CUX1-207ENST00000465461 C1orf54Q8WWF1 131 aa11.72□□□□□ -0.53
CUX1-207ENST00000465461 RMDN1Q96DB5 314 aa11.72□□□□□ -0.53
CUX1-207ENST00000465461 IMP4Q96G21 291 aaKnown RBP11.72□□□□□ -0.53
CUX1-207ENST00000465461 BMFQ96LC9 184 aa11.72□□□□□ -0.53
CUX1-207ENST00000465461 KLF6Q99612 283 aaPredicted RBP11.72□□□□□ -0.53
CUX1-207ENST00000465461 GAREM1Q9H706 876 aa11.72□□□□□ -0.53
CUX1-207ENST00000465461 PCDH9Q9HC56 1237 aa11.72□□□□□ -0.53
CUX1-207ENST00000465461 AMACRQ9UHK6 382 aa11.72□□□□□ -0.53
CUX1-207ENST00000465461 PHTF1Q9UMS5 762 aa11.72□□□□□ -0.53
CUX1-207ENST00000465461 DMTF1Q9Y222 760 aa11.72□□□□□ -0.53
CUX1-207ENST00000465461 GOLGA6L9A6NEM1 432 aa11.71□□□□□ -0.53
CUX1-207ENST00000465461 VILLO15195 856 aa11.71□□□□□ -0.53
CUX1-207ENST00000465461 LZTS3O60299 673 aaPredicted RBP11.71□□□□□ -0.53
CUX1-207ENST00000465461 CEP104O60308 925 aa11.71□□□□□ -0.53
CUX1-207ENST00000465461 PMPCBO75439 489 aa11.71□□□□□ -0.53
CUX1-207ENST00000465461 ATP1A1P05023 1023 aaKnown RBP11.71□□□□□ -0.53
CUX1-207ENST00000465461 SYPP08247 313 aa11.71□□□□□ -0.53
CUX1-207ENST00000465461 GM2AP17900 193 aa11.71□□□□□ -0.53
CUX1-207ENST00000465461 LHCGRP22888 699 aa11.71□□□□□ -0.53
CUX1-207ENST00000465461 AKT2P31751 481 aa11.71□□□□□ -0.53
CUX1-207ENST00000465461 HNF1BP35680 557 aa11.71□□□□□ -0.53
CUX1-207ENST00000465461 GRIA4P48058 902 aa11.71□□□□□ -0.53
CUX1-207ENST00000465461 EPHB1P54762 984 aa11.71□□□□□ -0.53
CUX1-207ENST00000465461 GDF10P55107 478 aa11.71□□□□□ -0.53
CUX1-207ENST00000465461 SNX1Q13596 522 aa11.71□□□□□ -0.53
CUX1-207ENST00000465461 CNGA3Q16281 694 aa11.71□□□□□ -0.53
CUX1-207ENST00000465461 TPRG1LQ5T0D9 272 aa11.71□□□□□ -0.53
CUX1-207ENST00000465461 LIPIQ6XZB0 460 aa11.71□□□□□ -0.53
CUX1-207ENST00000465461 RFLNAQ6ZTI6 216 aa11.71□□□□□ -0.53
CUX1-207ENST00000465461 PRUNE1Q86TP1 453 aa11.71□□□□□ -0.53
CUX1-207ENST00000465461 CDKL3Q8IVW4 592 aaPredicted RBP11.71□□□□□ -0.53
CUX1-207ENST00000465461 TAB3Q8N5C8 712 aaPredicted RBP11.71□□□□□ -0.53
CUX1-207ENST00000465461 TP53I13Q8NBR0 393 aaPredicted RBP11.71□□□□□ -0.53
CUX1-207ENST00000465461 OR13H1Q8NG92 308 aa11.71□□□□□ -0.53
CUX1-207ENST00000465461 CCDC110Q8TBZ0 833 aa11.71□□□□□ -0.53
CUX1-207ENST00000465461 CENPTQ96BT3 561 aa11.71□□□□□ -0.53
CUX1-207ENST00000465461 KLHDC7BQ96G42 594 aa11.71□□□□□ -0.53
CUX1-207ENST00000465461 SLC25A51Q9H1U9 297 aa11.71□□□□□ -0.53
CUX1-207ENST00000465461 USP29Q9HBJ7 922 aa11.71□□□□□ -0.53
CUX1-207ENST00000465461 TMEM9BQ9NQ34 198 aa11.71□□□□□ -0.53
CUX1-207ENST00000465461 RSPH14Q9UHP6 348 aa11.71□□□□□ -0.53
CUX1-207ENST00000465461 DNPEPQ9ULA0 475 aa11.71□□□□□ -0.53
CUX1-207ENST00000465461 FNDC3AQ9Y2H6 1198 aaKnown RBP11.71□□□□□ -0.53
CUX1-207ENST00000465461 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.71□□□□□ -0.53
CUX1-207ENST00000465461 TMEM131Q92545 1883 aa11.71□□□□□ -0.53
CUX1-207ENST00000465461 TLR4O00206 839 aa11.7□□□□□ -0.54
CUX1-207ENST00000465461 RECQL5O94762 991 aaPredicted RBP11.7□□□□□ -0.54
CUX1-207ENST00000465461 PCCBP05166 539 aa11.7□□□□□ -0.54
CUX1-207ENST00000465461 ELFN1P0C7U0 828 aa11.7□□□□□ -0.54
CUX1-207ENST00000465461 PIRTP0C851 137 aa11.7□□□□□ -0.54
CUX1-207ENST00000465461 THEGLP0DJG4 465 aa11.7□□□□□ -0.54
CUX1-207ENST00000465461 CES1P23141 567 aa11.7□□□□□ -0.54
CUX1-207ENST00000465461 VIPR1P32241 457 aa11.7□□□□□ -0.54
CUX1-207ENST00000465461 IGFALSP35858 605 aa11.7□□□□□ -0.54
CUX1-207ENST00000465461 CTSKP43235 329 aa11.7□□□□□ -0.54
CUX1-207ENST00000465461 SUOXP51687 545 aa11.7□□□□□ -0.54
CUX1-207ENST00000465461 NXPH1P58417 271 aa11.7□□□□□ -0.54
CUX1-207ENST00000465461 OLIG2Q13516 323 aa11.7□□□□□ -0.54
CUX1-207ENST00000465461 ACOX1Q15067 660 aa11.7□□□□□ -0.54
CUX1-207ENST00000465461 IRF4Q15306 451 aa11.7□□□□□ -0.54
CUX1-207ENST00000465461 QPCTQ16769 361 aa11.7□□□□□ -0.54
CUX1-207ENST00000465461 WSCD2Q2TBF2 565 aa11.7□□□□□ -0.54
CUX1-207ENST00000465461 ZNF542PQ5EBM4 170 aa11.7□□□□□ -0.54
CUX1-207ENST00000465461 ANKRD20A2Q5SQ80 823 aa11.7□□□□□ -0.54
CUX1-207ENST00000465461 ANKRD20A1Q5TYW2 823 aa11.7□□□□□ -0.54
CUX1-207ENST00000465461 ANKRD20A3Q5VUR7 823 aa11.7□□□□□ -0.54
CUX1-207ENST00000465461 CRTC1Q6UUV9 634 aa11.7□□□□□ -0.54
CUX1-207ENST00000465461 Q6ZSR6 202 aa11.7□□□□□ -0.54
CUX1-207ENST00000465461 NYAP1Q6ZVC0 841 aa11.7□□□□□ -0.54
CUX1-207ENST00000465461 HSD11B1LQ7Z5J1 315 aa11.7□□□□□ -0.54
CUX1-207ENST00000465461 PTAR1Q7Z6K3 402 aaPredicted RBP11.7□□□□□ -0.54
CUX1-207ENST00000465461 PELI3Q8N2H9 469 aa11.7□□□□□ -0.54
CUX1-207ENST00000465461 FAM71DQ8N9W8 422 aa11.7□□□□□ -0.54
CUX1-207ENST00000465461 MFSD2AQ8NA29 543 aa11.7□□□□□ -0.54
CUX1-207ENST00000465461 TTC13Q8NBP0 860 aa11.7□□□□□ -0.54
CUX1-207ENST00000465461 PLA2G15Q8NCC3 412 aa11.7□□□□□ -0.54
CUX1-207ENST00000465461 SLC35B2Q8TB61 432 aa11.7□□□□□ -0.54
CUX1-207ENST00000465461 NETO1Q8TDF5 533 aa11.7□□□□□ -0.54
CUX1-207ENST00000465461 TADA1Q96BN2 335 aa11.7□□□□□ -0.54
CUX1-207ENST00000465461 SCRN2Q96FV2 425 aa11.7□□□□□ -0.54
CUX1-207ENST00000465461 OXNAD1Q96HP4 312 aaPredicted RBP11.7□□□□□ -0.54
CUX1-207ENST00000465461 MS4A14Q96JA4 679 aa11.7□□□□□ -0.54
CUX1-207ENST00000465461 GORASP1Q9BQQ3 440 aa11.7□□□□□ -0.54
CUX1-207ENST00000465461 TMEM121Q9BTD3 319 aa11.7□□□□□ -0.54
CUX1-207ENST00000465461 CARD9Q9H257 536 aa11.7□□□□□ -0.54
CUX1-207ENST00000465461 HAUS2Q9NVX0 235 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms