RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 NEUROG2Q9H2A3 272 aa17.61■□□□□ 0.41
CPSF4-209ENST00000465132 EBF2Q9HAK2 575 aa17.61■□□□□ 0.41
CPSF4-209ENST00000465132 KLHL8Q9P2G9 620 aaPredicted RBP17.61■□□□□ 0.41
CPSF4-209ENST00000465132 CDC23Q9UJX2 597 aa17.61■□□□□ 0.41
CPSF4-209ENST00000465132 FZD4Q9ULV1 537 aa17.61■□□□□ 0.41
CPSF4-209ENST00000465132 FCF1Q9Y324 198 aaKnown RBP17.61■□□□□ 0.41
CPSF4-209ENST00000465132 CABIN1Q9Y6J0 2220 aa17.61■□□□□ 0.41
CPSF4-209ENST00000465132 A0A1B0GTQ1 180 aa17.6■□□□□ 0.41
CPSF4-209ENST00000465132 LRRC72A6NJI9 287 aa17.6■□□□□ 0.41
CPSF4-209ENST00000465132 KCNN4O15554 427 aa17.6■□□□□ 0.41
CPSF4-209ENST00000465132 GAS8O95995 478 aa17.6■□□□□ 0.41
CPSF4-209ENST00000465132 ADH1BP00325 375 aa17.6■□□□□ 0.41
CPSF4-209ENST00000465132 JCHAINP01591 159 aa17.6■□□□□ 0.41
CPSF4-209ENST00000465132 SLC8A1P32418 973 aa17.6■□□□□ 0.41
CPSF4-209ENST00000465132 CAMK2BQ13554 666 aa17.6■□□□□ 0.41
CPSF4-209ENST00000465132 PRPSAP1Q14558 356 aa17.6■□□□□ 0.41
CPSF4-209ENST00000465132 CYTH1Q15438 398 aa17.6■□□□□ 0.41
CPSF4-209ENST00000465132 SMAD1Q15797 465 aaKnown RBP17.6■□□□□ 0.41
CPSF4-209ENST00000465132 INAVAQ3KP66 663 aa17.6■□□□□ 0.41
CPSF4-209ENST00000465132 CFAP58Q5T655 872 aa17.6■□□□□ 0.41
CPSF4-209ENST00000465132 PDZD3Q86UT5 571 aa17.6■□□□□ 0.41
CPSF4-209ENST00000465132 TP53INP2Q8IXH6 220 aa17.6■□□□□ 0.41
CPSF4-209ENST00000465132 PAF1Q8N7H5 531 aa17.6■□□□□ 0.41
CPSF4-209ENST00000465132 TMIEQ8NEW7 156 aa17.6■□□□□ 0.41
CPSF4-209ENST00000465132 CCHCR1Q8TD31 782 aa17.6■□□□□ 0.41
CPSF4-209ENST00000465132 C1orf54Q8WWF1 131 aa17.6■□□□□ 0.41
CPSF4-209ENST00000465132 SKA1Q96BD8 255 aa17.6■□□□□ 0.41
CPSF4-209ENST00000465132 MS4A14Q96JA4 679 aa17.6■□□□□ 0.41
CPSF4-209ENST00000465132 NUDCD1Q96RS6 583 aa17.6■□□□□ 0.41
CPSF4-209ENST00000465132 FAM129BQ96TA1 746 aa17.6■□□□□ 0.41
CPSF4-209ENST00000465132 HERPUD2Q9BSE4 406 aa17.6■□□□□ 0.41
CPSF4-209ENST00000465132 CPEB1Q9BZB8 566 aaKnown RBP17.6■□□□□ 0.41
CPSF4-209ENST00000465132 ATP13A3Q9H7F0 1226 aa17.6■□□□□ 0.41
CPSF4-209ENST00000465132 SCUBE2Q9NQ36 999 aa17.6■□□□□ 0.41
CPSF4-209ENST00000465132 DYRK4Q9NR20 520 aa17.6■□□□□ 0.41
CPSF4-209ENST00000465132 HECAQ9UBI9 543 aaPredicted RBP17.6■□□□□ 0.41
CPSF4-209ENST00000465132 IL36AQ9UHA7 158 aa17.6■□□□□ 0.41
CPSF4-209ENST00000465132 TMEM131Q92545 1883 aa17.6■□□□□ 0.41
CPSF4-209ENST00000465132 ADAMTS20P59510 1910 aa17.6■□□□□ 0.41
CPSF4-209ENST00000465132 LAMA5O15230 3695 aa17.59■□□□□ 0.41
CPSF4-209ENST00000465132 BAHCC1Q9P281 2608 aa17.59■□□□□ 0.41
CPSF4-209ENST00000465132 TCRBV7S2A1N4TA0A589 114 aa17.59■□□□□ 0.41
CPSF4-209ENST00000465132 FAM149AA5PLN7 773 aa17.59■□□□□ 0.41
CPSF4-209ENST00000465132 TRABD2BA6NFA1 517 aa17.59■□□□□ 0.41
CPSF4-209ENST00000465132 C5orf60A6NFR6 353 aa17.59■□□□□ 0.41
CPSF4-209ENST00000465132 KCNK1O00180 336 aa17.59■□□□□ 0.41
CPSF4-209ENST00000465132 RNF103O00237 685 aa17.59■□□□□ 0.41
CPSF4-209ENST00000465132 ZNF185O15231 689 aa17.59■□□□□ 0.41
CPSF4-209ENST00000465132 SMAD6O43541 496 aaKnown RBP17.59■□□□□ 0.41
CPSF4-209ENST00000465132 BNIP3LO60238 219 aa17.59■□□□□ 0.41
CPSF4-209ENST00000465132 PHF2O75151 1096 aa17.59■□□□□ 0.41
CPSF4-209ENST00000465132 CD160O95971 181 aa17.59■□□□□ 0.41
CPSF4-209ENST00000465132 PEX11BO96011 259 aa17.59■□□□□ 0.41
CPSF4-209ENST00000465132 WNT1P04628 370 aa17.59■□□□□ 0.41
CPSF4-209ENST00000465132 RBL1P28749 1068 aa17.59■□□□□ 0.41
CPSF4-209ENST00000465132 SERPINA4P29622 427 aa17.59■□□□□ 0.41
CPSF4-209ENST00000465132 CCR5P51681 352 aa17.59■□□□□ 0.41
CPSF4-209ENST00000465132 POLR2LP62875 67 aaKnown RBP17.59■□□□□ 0.41
CPSF4-209ENST00000465132 SLC14A2Q15849 920 aa17.59■□□□□ 0.41
CPSF4-209ENST00000465132 CYP1B1Q16678 543 aa17.59■□□□□ 0.41
CPSF4-209ENST00000465132 MYLK3Q32MK0 819 aa17.59■□□□□ 0.41
CPSF4-209ENST00000465132 P3H1Q32P28 736 aa17.59■□□□□ 0.41
CPSF4-209ENST00000465132 CCDC157Q569K6 752 aa17.59■□□□□ 0.41
CPSF4-209ENST00000465132 PRAMEF14Q5SWL7 426 aa17.59■□□□□ 0.41
CPSF4-209ENST00000465132 LEKR1Q6ZMV7 388 aa17.59■□□□□ 0.41
CPSF4-209ENST00000465132 ARHGEF18Q6ZSZ5 1173 aa17.59■□□□□ 0.41
CPSF4-209ENST00000465132 Q6ZVU0 165 aa17.59■□□□□ 0.41
CPSF4-209ENST00000465132 PID1Q7Z2X4 250 aa17.59■□□□□ 0.41
CPSF4-209ENST00000465132 SRLQ86TD4 932 aa17.59■□□□□ 0.41
CPSF4-209ENST00000465132 NDUFAF2Q8N183 169 aa17.59■□□□□ 0.41
CPSF4-209ENST00000465132 AADATQ8N5Z0 425 aa17.59■□□□□ 0.41
CPSF4-209ENST00000465132 NETO2Q8NC67 525 aa17.59■□□□□ 0.41
CPSF4-209ENST00000465132 HCAR2Q8TDS4 363 aa17.59■□□□□ 0.41
CPSF4-209ENST00000465132 HNRNPLLQ8WVV9 542 aaKnown RBP17.59■□□□□ 0.41
CPSF4-209ENST00000465132 PTPRN2Q92932 1015 aa17.59■□□□□ 0.41
CPSF4-209ENST00000465132 TEKT5Q96M29 485 aa17.59■□□□□ 0.41
CPSF4-209ENST00000465132 ZNF641Q96N77 438 aaPredicted RBP17.59■□□□□ 0.41
CPSF4-209ENST00000465132 ELF4Q99607 663 aaPredicted RBP17.59■□□□□ 0.41
CPSF4-209ENST00000465132 MGME1Q9BQP7 344 aa17.59■□□□□ 0.41
CPSF4-209ENST00000465132 NT5MQ9NPB1 228 aa17.59■□□□□ 0.41
CPSF4-209ENST00000465132 FTSJ1Q9UET6 329 aa17.59■□□□□ 0.41
CPSF4-209ENST00000465132 DNPEPQ9ULA0 475 aa17.59■□□□□ 0.41
CPSF4-209ENST00000465132 R3HDM2Q9Y2K5 976 aaKnown RBP17.59■□□□□ 0.41
CPSF4-209ENST00000465132 TTLL3Q9Y4R7 772 aa17.59■□□□□ 0.41
CPSF4-209ENST00000465132 K7ERQ8 282 aa17.58■□□□□ 0.4
CPSF4-209ENST00000465132 PSMD3O43242 534 aa17.58■□□□□ 0.4
CPSF4-209ENST00000465132 ANXA9O76027 345 aa17.58■□□□□ 0.4
CPSF4-209ENST00000465132 PSMD8P48556 350 aa17.58■□□□□ 0.4
CPSF4-209ENST00000465132 NUMBP49757 651 aa17.58■□□□□ 0.4
CPSF4-209ENST00000465132 SCNN1BP51168 640 aa17.58■□□□□ 0.4
CPSF4-209ENST00000465132 CCNHP51946 323 aaPredicted RBP17.58■□□□□ 0.4
CPSF4-209ENST00000465132 BCL2L1Q07817 233 aa17.58■□□□□ 0.4
CPSF4-209ENST00000465132 CYP4F3Q08477 520 aa17.58■□□□□ 0.4
CPSF4-209ENST00000465132 OASLQ15646 514 aaKnown RBP17.58■□□□□ 0.4
CPSF4-209ENST00000465132 ALG1LQ6GMV1 187 aa17.58■□□□□ 0.4
CPSF4-209ENST00000465132 CCDC137Q6PK04 289 aaKnown RBP17.58■□□□□ 0.4
CPSF4-209ENST00000465132 DHRS13Q6UX07 377 aa17.58■□□□□ 0.4
CPSF4-209ENST00000465132 GATAD2AQ86YP4 633 aa17.58■□□□□ 0.4
CPSF4-209ENST00000465132 STK40Q8N2I9 435 aa17.58■□□□□ 0.4
CPSF4-209ENST00000465132 PRELID2Q8N945 189 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms